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  5. KNA57440

KNA57440 (VCV51_032836)


Aliases : VCV51_032836

Description : sigma-54 interaction domain-containing protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].


Gene families : OG_02_0000008 (OrthoFinder) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA57440
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
CRN66268 zraR_1 Transcriptional regulatory protein ZraR [Ensembl].... 0.03 OrthoFinder
CRN78675 acoR_1 Acetoin catabolism regulatory protein [Ensembl]. GAF... 0.03 OrthoFinder
CRO21544 zraR_3 Transcriptional regulatory protein ZraR [Ensembl].... 0.05 OrthoFinder
CRP62097 rocR Arginine utilization regulatory protein RocR [Ensembl].... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008134 transcription factor binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001539 cilium or flagellum-dependent cell motility IEP Enrichment
BP GO:0006282 regulation of DNA repair IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
MF GO:0008773 [protein-PII] uridylyltransferase activity IEP Enrichment
BP GO:0015804 neutral amino acid transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0032328 alanine transport IEP Enrichment
BP GO:0040011 locomotion IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0048870 cell motility IEP Enrichment
BP GO:0051052 regulation of DNA metabolic process IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071973 bacterial-type flagellum-dependent cell motility IEP Enrichment
BP GO:0080134 regulation of response to stress IEP Enrichment
BP GO:0080135 regulation of cellular response to stress IEP Enrichment
BP GO:0097588 archaeal or bacterial-type flagellum-dependent cell motility IEP Enrichment
BP GO:2001020 regulation of response to DNA damage stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR002078 Sigma_54_int 146 305
IPR002197 HTH_Fis 396 435
No external refs found!