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  5. KNA59436

KNA59436 (VCV51_031275)


Aliases : VCV51_031275

Description : lipoprotein releasing system [Ensembl]. FtsX-like permease family, MacB-like periplasmic core domain [Interproscan].


Gene families : OG_02_0000459 (OrthoFinder) Phylogenetic Tree(s): OG0000459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA59436
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC74200 lolC, b1116 lipoprotein-releasing system transmembrane protein... 0.05 OrthoFinder
AAC74202 lolE, b1118 lipoprotein-releasing system transmembrane protein... 0.04 OrthoFinder
AAL20146 STM1217, ycfU integral membrane protein ABC transporter [Ensembl].... 0.06 OrthoFinder
AAL20148 STM1219, ycfW integral membrane protein ABC transporter [Ensembl].... 0.1 OrthoFinder
AGT24832 N559_3172, LolE outer membrane-specific lipoprotein transporter subunit... 0.05 OrthoFinder
AGT24834 N559_3174, LolC outer membrane-specific lipoprotein transporter subunit... 0.04 OrthoFinder
AHY40154 CJ8421_04655 putative permease [Ensembl]. FtsX-like permease family... 0.04 OrthoFinder
CRO91878 lolE_2 Lipoprotein-releasing system transmembrane protein LolE... 0.02 OrthoFinder
EDJ90129 CGSHi22421_03378 ABC-type transport system, involved in lipoprotein... 0.05 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005539 glycosaminoglycan binding IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0009271 phage shock IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
BP GO:0009615 response to virus IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0042834 peptidoglycan binding IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0043207 response to external biotic stimulus IEP Enrichment
BP GO:0043213 bacteriocin transport IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051707 response to other organism IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0070206 protein trimerization IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0098586 cellular response to virus IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR025857 MacB_PCD 9 220
IPR003838 ABC3_permease_dom 280 386
No external refs found!