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  5. KNA59668

KNA59668 (VCV51_031354)


Aliases : VCV51_031354

Description : DNA polymerase III [Ensembl]. DNA polymerase III [Interproscan].


Gene families : OG_02_0000680 (OrthoFinder) Phylogenetic Tree(s): OG0000680_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA59668
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC74183 holB, b1099 DNA polymerase III, delta prime subunit [Ensembl]. DNA... 0.05 OrthoFinder
AAK99640 spr0836, holB DNA polymerase III, delta' subunit [Ensembl]. DNA... 0.03 OrthoFinder
AAL20130 STM1201, holB DNA polymerase III, delta prime subunit [Ensembl]. DNA... 0.04 OrthoFinder
CCG27529 No alias DNA polymerase III delta prime subunit [Ensembl]. DNA... 0.02 OrthoFinder
CRO47306 holB DNA polymerase III subunit delta' [Ensembl]. DNA... 0.05 OrthoFinder
EDJ91538 CGSHi22421_07202 DNA polymerase III subunit delta [Ensembl]. DNA... 0.06 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0009360 DNA polymerase III complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009271 phage shock IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
BP GO:0009615 response to virus IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly IEP Enrichment
BP GO:0043207 response to external biotic stimulus IEP Enrichment
BP GO:0043213 bacteriocin transport IEP Enrichment
MF GO:0045301 tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051707 response to other organism IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:0071709 membrane assembly IEP Enrichment
BP GO:0098586 cellular response to virus IEP Enrichment
InterPro domains Description Start Stop
IPR015199 DNA_pol_III_delta_C 164 270
No external refs found!