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  5. KNA59943

KNA59943 (VCV51_032355)


Aliases : VCV51_032355

Description : GGDEF domain-containing protein [Ensembl]. Diguanylate cyclase [Interproscan].


Gene families : OG_02_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA59943
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AAC74110 dgcT, b1025 diguanylate cyclase, membrane-anchored [Ensembl].... 0.04 OrthoFinder
AAC74423 dgcM, b1341 diguanylate cyclase, csgD regulator [Ensembl]. PAS fold,... 0.03 OrthoFinder
AGT24348 N559_2672 putative transport protein [Ensembl]. GGDEF domain... 0.03 OrthoFinder
AGT25034 N559_3381 diguanylate cyclase domain protein [Ensembl]. GGDEF... 0.03 OrthoFinder
AGT26512 N559_4928 hypothetical protein [Ensembl]. GGDEF domain, Cache... 0.04 OrthoFinder
CCL17605 BN171_1610001 Putative diguanylate kinase signaling protein [Ensembl].... 0.03 OrthoFinder
CCL17606 BN171_1610002 Putative diguanylate kinase signaling protein [Ensembl].... 0.05 OrthoFinder
CRN70164 gmr_2 Cyclic di-GMP phosphodiesterase Gmr [Ensembl]. PAS fold,... 0.04 OrthoFinder
CRO51132 pleD_1 Stalked cell differentiation-controlling protein... 0.04 OrthoFinder
CRO93456 ydaM_1 putative diguanylate cyclase YdaM [Ensembl]. PAS fold,... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0071805 potassium ion transmembrane transport IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000160 GGDEF_dom 179 334
No external refs found!