KNA60005 (VCV51_032417)

Aliases : VCV51_032417

Description : D-serine deaminase transcriptional activator [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].

Gene families : OG_02_0000139 (OrthoFinder) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: KNA60005
Cluster	HCCA: Cluster_29

Target	Alias	Description	ECC score	Gene Family Method
AAC75850	gcvA, b2808	glycine cleavage system transcriptional activator;...	0.04	OrthoFinder
AAL22660	STM3800, dsdC	LysR family transcriptional activator [Ensembl]. LysR...	0.03	OrthoFinder
AGT23984	N559_2281	LysR family transcriptional regulator [Ensembl]. LysR...	0.05	OrthoFinder
AGT25159	N559_3511, LysR	transcriptional regulator LysR [Ensembl]. LysR substrate...	0.03	OrthoFinder
CRO53395	gcvA_6	Gcv operon activator [Ensembl]. LysR substrate binding...	0.02	OrthoFinder
CRP62462	gcvA_8	Gcv operon activator [Ensembl]. LysR substrate binding...	0.03	OrthoFinder
CRP69233	gcvA_10	Gcv operon activator [Ensembl]. LysR substrate binding...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008080	N-acetyltransferase activity	IEP	Enrichment
BP	GO:0015858	nucleoside transport	IEP	Enrichment
BP	GO:0015931	nucleobase-containing compound transport	IEP	Enrichment
MF	GO:0016407	acetyltransferase activity	IEP	Enrichment
MF	GO:0016410	N-acyltransferase activity	IEP	Enrichment
MF	GO:0016746	acyltransferase activity	IEP	Enrichment
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Enrichment
BP	GO:0034258	nicotinamide riboside transport	IEP	Enrichment
BP	GO:1901264	carbohydrate derivative transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000847	Tscrpt_reg_HTH_LysR	20	78
IPR005119	LysR_subst-bd	101	309

External Links

No external refs found!

KNA60005 (VCV51_032417)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation