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  5. KNA60650

KNA60650 (VCV51_032089)


Aliases : VCV51_032089

Description : sigma-54 interaction domain-containing protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].


Gene families : OG_02_0000008 (OrthoFinder) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA60650
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AAC75280 atoC, b2220 fused response regulator of ato operon, in two-component... 0.01 OrthoFinder
AAC75607 glrR, b2554 response regulator regulating glmY sRNA in two-component... 0.04 OrthoFinder
AAL19321 STM0367, prpR regulator for prp operon (EBP family) [Ensembl].... 0.01 OrthoFinder
AAL21262 STM2361 putative regulatory protein [Ensembl]. PAS fold,... 0.04 OrthoFinder
AAL21456 STM2562, yfhA putative transcriptional regulator of two-component... 0.03 OrthoFinder
AAL21719 STM2839, ygaA putative EBP family regulator [Ensembl]. GAF domain,... 0.03 OrthoFinder
AGT22959 N559_1193 anaerobic nitric oxide reductase transcription regulator... 0.05 OrthoFinder
AKI50171 L2625_02335 sigma-54 dependent transcriptional regulator [Ensembl].... 0.02 OrthoFinder
CCL17338 BN171_1440022 Transcriptional regulator, sigma-54-dependent [Ensembl].... 0.04 OrthoFinder
CCL18448 BN171_2340008 Transcriptional regulator, sigma-54-dependent [Ensembl].... 0.05 OrthoFinder
CCL19199 BN171_2950001 Transcriptional regulator, sigma-54-dependent [Ensembl].... 0.03 OrthoFinder
CCL19713 BN171_3410005 Putative sigma-54 interacting protein (fragment)... 0.04 OrthoFinder
CRO39560 dctD_1 C4-dicarboxylate transport transcriptional regulatory... 0.01 OrthoFinder
CRP62097 rocR Arginine utilization regulatory protein RocR [Ensembl].... 0.05 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0008134 transcription factor binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
BP GO:0034258 nicotinamide riboside transport IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
InterPro domains Description Start Stop
IPR002197 HTH_Fis 369 407
IPR002078 Sigma_54_int 114 277
IPR001789 Sig_transdc_resp-reg_receiver 2 84
No external refs found!