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  5. KNA60662

KNA60662 (VCV51_032101)


Aliases : VCV51_032101

Description : branched-chain amino acid transport system/permease component [Ensembl]. Branched-chain amino acid transport system / permease component [Interproscan].


Gene families : OG_02_0000052 (OrthoFinder) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA60662
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AAC74587 lsrC, b1514 autoinducer 2 import system permease protein [Ensembl].... 0.03 OrthoFinder
AAC74588 lsrD, b1515 autoinducer 2 import system permease protein [Ensembl].... 0.03 OrthoFinder
AAC75209 mglC, b2148 methyl-galactoside transporter subunit [Ensembl].... 0.08 OrthoFinder
AAC76592 xylH, b3568 D-xylose ABC transporter permease [Ensembl].... 0.07 OrthoFinder
AAC76773 rbsC, b3750 D-ribose ABC transporter permease [Ensembl].... 0.1 OrthoFinder
AAC77047 alsC, b4086 D-allose ABC transporter permease [Ensembl].... 0.04 OrthoFinder
AAC77187 ytfT, b4230 putative sugar ABC transporter permease [Ensembl].... 0.04 OrthoFinder
AAC77188 yjfF, b4231 putative sugar ABC transporter permease [Ensembl].... 0.04 OrthoFinder
AAL21092 STM2188, mglC methyl-galactoside transport protein [Ensembl].... 0.03 OrthoFinder
AAL22741 STM3883, rbsC D-ribose high-affinity transport protein (1st module,... 0.06 OrthoFinder
AGT22039 N559_0217 D-xylose transport permease ABC transporter membrane... 0.03 OrthoFinder
AGT23414 N559_1670 beta-methylgalactoside transporter inner membrane... 0.05 OrthoFinder
AGT24251 N559_2570 putative ribose/xylose/arabinose/galactoside ABC-type... 0.03 OrthoFinder
AGT25326 N559_3686 putative ABC-type sugar transport system permease... 0.03 OrthoFinder
AGT25327 N559_3687 putative inner-membrane translocator [Ensembl]. 0.03 OrthoFinder
AGT25343 N559_3703 inner-membrane translocator [Ensembl]. 0.03 OrthoFinder
AGT25371 N559_3733 sugar ABC transporter permease [Ensembl]. 0.07 OrthoFinder
AGT25473 N559_3837 sugar ABC transport system permease component [Ensembl]. 0.05 OrthoFinder
AGT26146 N559_4543 ribose high-affinity ABC transporter permease component... 0.04 OrthoFinder
AGT26697 N559_5123 ribose ABC transporter permease protein [Ensembl]. 0.12 OrthoFinder
CCL17792 BN171_1800015 ABC-type transport system, sugar-family permease... 0.04 OrthoFinder
CCL18508 rbsC, BN171_240013 ABC-type transport system, ribose-specific permease... 0.05 OrthoFinder
CRN86499 rbsC Ribose transport system permease protein RbsC [Ensembl].... 0.12 OrthoFinder
EDJ91405 CGSHi22421_04858 beta-methylgalactoside transporter inner membrane... 0.06 OrthoFinder
EDJ91906 CGSHi22421_09123 D-xylose ABC transporter permease protein [Ensembl].... 0.07 OrthoFinder
EDJ91907 CGSHi22421_09128 D-xylose ABC transporter permease protein [Ensembl].... 0.08 OrthoFinder
KNA55655 VCV51_030971 branched-chain amino acid transport system/permease... 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
InterPro domains Description Start Stop
IPR001851 ABC_transp_permease 57 325
No external refs found!