KNA60920 (VCV51_031894)

Aliases : VCV51_031894

Description : peptide ABC transporter ATP-binding protein [Ensembl]. ABC transporter, Oligopeptide/dipeptide transporter [Interproscan].

Gene families : OG_02_0000011 (OrthoFinder) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: KNA60920
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AAC74373 sapD, b1291 antimicrobial peptide ABC transporter ATPase [Ensembl].... 0.02 OrthoFinder
AAC74557 ddpD, b1484 D,D-dipeptide ABC transporter ATPase [Ensembl]. ABC... 0.02 OrthoFinder
AAC75241 yejF, b2180 microcin C ABC transporter ATPase [Ensembl]. ABC... 0.03 OrthoFinder
AAC76505 nikE, b3480 nickel ABC transporter ATPase [Ensembl]. ABC transporter... 0.02 OrthoFinder
AAC76565 dppF, b3540 dipeptide/heme ABC transporter ATPas [Ensembl]. ABC... 0.06 OrthoFinder
AAC76566 dppD, b3541 dipeptide/heme ABC transporter ATPas [Ensembl]. ABC... 0.07 OrthoFinder
AAL00507 spr1704, amiE ABC transporter ATP-binding protein-oligopeptide... 0.03 OrthoFinder
AAL20612 STM1695, sapD ABC superfamily peptide transport protein [Ensembl]. ABC... 0.03 OrthoFinder
AEA95056 opp2F, OG1RF_12369 ABC superfamily ATP binding cassette transporter, ABC... 0.04 OrthoFinder
AEA95057 opp2D, OG1RF_12370 ABC superfamily ATP binding cassette transporter, ABC... 0.04 OrthoFinder
AGT22076 N559_0254 dipeptide transporter ATP-binding subunit [Ensembl]. 0.03 OrthoFinder
AGT23968 N559_2265 ATP-binding protein of oligopeptide ABC transport system... 0.04 OrthoFinder
AGT24126 N559_2433 putative ATP-binding component of a transport system [Ensembl]. 0.05 OrthoFinder
CCG26343 OppD Oligopeptide transport ATP-binding protein OppD (TC... 0.02 OrthoFinder
CCG26344 OppF Oligopeptide transport ATP-binding protein OppF (TC... 0.03 OrthoFinder
CCL19133 BN171_2870063 ABC-type transport system, ATP-binding protein; putative... 0.03 OrthoFinder
CPC43817 oppF_2, ERS093114_00440 Oligopeptide transport ATP-binding protein oppF... 0.03 OrthoFinder
CPC43856 oppD_2, ERS093114_00441 Oligopeptide transport ATP-binding protein oppD... 0.02 OrthoFinder
CRO37964 gsiA_3 Glutathione import ATP-binding protein GsiA [Ensembl].... 0.05 OrthoFinder
CRP12239 gsiA_4 Glutathione import ATP-binding protein GsiA [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0015833 peptide transport IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003714 transcription corepressor activity IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016989 sigma factor antagonist activity IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0042157 lipoprotein metabolic process IEP Enrichment
BP GO:0042158 lipoprotein biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 303 453
IPR013563 Oligopep_ABC_C 504 526
IPR013563 Oligopep_ABC_C 236 262
IPR003439 ABC_transporter-like_ATP-bd 27 184
No external refs found!