KNA60923 (VCV51_031897)


Aliases : VCV51_031897

Description : bacterial extracellular solute-binding protein, family 5 [Ensembl]. Bacterial extracellular solute-binding proteins [Interproscan].


Gene families : OG_02_0001641 (OrthoFinder) Phylogenetic Tree(s): OG0001641_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA60923
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AGT23389 N559_1643 oligopeptide ABC transporter periplasmic... 0.05 OrthoFinder
CRO37881 appA_2 Oligopeptide-binding protein AppA precursor [Ensembl].... 0.03 OrthoFinder
CRP53683 appA_3 Oligopeptide-binding protein AppA precursor [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003714 transcription corepressor activity IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
BP GO:0006027 glycosaminoglycan catabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0009253 peptidoglycan catabolic process IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016989 sigma factor antagonist activity IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
InterPro domains Description Start Stop
IPR000914 SBP_5_dom 100 508
No external refs found!