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  5. KNA61013

KNA61013 (VCV51_031988)


Aliases : VCV51_031988

Description : GGDEF domain-containing protein [Ensembl]. PAS domain, Diguanylate cyclase [Interproscan].


Gene families : OG_02_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA61013
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AGT26512 N559_4928 hypothetical protein [Ensembl]. GGDEF domain, Cache... 0.03 OrthoFinder
AKI49906 L2625_02057 GGDEF domain membrane protein [Ensembl]. GGDEF domain... 0.03 OrthoFinder
CCL20093 BN171_3690037 Putative signaling protein [Ensembl]. Diguanylate... 0.03 OrthoFinder
CCL20486 BN171_550008 Putative diguanylate kinase signaling protein (fragment)... 0.03 OrthoFinder
CCL20487 BN171_560001 Putative diguanylate kinase signaling protein [Ensembl].... 0.04 OrthoFinder
CRN70164 gmr_2 Cyclic di-GMP phosphodiesterase Gmr [Ensembl]. PAS fold,... 0.05 OrthoFinder
CRO51132 pleD_1 Stalked cell differentiation-controlling protein... 0.03 OrthoFinder
CRO93456 ydaM_1 putative diguanylate cyclase YdaM [Ensembl]. PAS fold,... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0034219 carbohydrate transmembrane transport IEP Enrichment
BP GO:0042618 poly-hydroxybutyrate metabolic process IEP Enrichment
BP GO:0042619 poly-hydroxybutyrate biosynthetic process IEP Enrichment
BP GO:1901440 poly(hydroxyalkanoate) metabolic process IEP Enrichment
BP GO:1901441 poly(hydroxyalkanoate) biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000014 PAS 351 451
IPR000160 GGDEF_dom 466 614
No external refs found!