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Aliases : sgbU, OG1RF_10908
Description : L-ribulose-5-phosphate 3-epimerase [Ensembl]. Xylose isomerase-like TIM barrel [Interproscan].
Gene families : OG_02_0001386 (OrthoFinder) Phylogenetic Tree(s): OG0001386_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AEA93595 | |
| Cluster | HCCA: Cluster_8 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC77154 | ulaE, b4197 | L-xylulose 5-phosphate 3-epimerase [Ensembl]. Xylose... | 0.07 | OrthoFinder | |
| AAL00648 | spr1845, sga | Hexulose-6-phosphate isomerase [Ensembl]. Xylose... | 0.04 | OrthoFinder | |
| AAL22535 | STM3676, sgbU | putative 3-hexulose-6-phosphate isomerase [Ensembl].... | 0.03 | OrthoFinder | |
| AAL23207 | STM4387, sgaU | putative hexulose-6-phosphate isomerase [Ensembl].... | 0.05 | OrthoFinder | |
| AGT26296 | N559_4704 | L-xylulose 5-phosphate 3-epimerase [Ensembl]. TIM barrel... | 0.07 | OrthoFinder | |
| CCG26478 | No alias | L-xylulose 5-phosphate 3-epimerase [Ensembl]. Xylose... | 0.07 | OrthoFinder | |
| KNA52269 | VCV51_033435 | hexulose-6-phosphate isomerase [Ensembl]. Xylose... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Enrichment |
| MF | GO:0004565 | beta-galactosidase activity | IEP | Enrichment |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Enrichment |
| BP | GO:0006050 | mannosamine metabolic process | IEP | Enrichment |
| BP | GO:0006051 | N-acetylmannosamine metabolic process | IEP | Enrichment |
| MF | GO:0008134 | transcription factor binding | IEP | Enrichment |
| BP | GO:0008643 | carbohydrate transport | IEP | Enrichment |
| MF | GO:0008982 | protein-N(PI)-phosphohistidine-sugar phosphotransferase activity | IEP | Enrichment |
| CC | GO:0009341 | beta-galactosidase complex | IEP | Enrichment |
| BP | GO:0009401 | phosphoenolpyruvate-dependent sugar phosphotransferase system | IEP | Enrichment |
| MF | GO:0015144 | carbohydrate transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015925 | galactosidase activity | IEP | Enrichment |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Enrichment |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
| MF | GO:0016854 | racemase and epimerase activity | IEP | Enrichment |
| MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | Enrichment |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0032324 | molybdopterin cofactor biosynthetic process | IEP | Enrichment |
| MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Enrichment |
| MF | GO:0043546 | molybdopterin cofactor binding | IEP | Enrichment |
| MF | GO:0047465 | N-acylglucosamine-6-phosphate 2-epimerase activity | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013022 | Xyl_isomerase-like_TIM-brl | 21 | 233 |
| No external refs found! |