AEA93595 (sgbU, OG1RF_10908)

Aliases : sgbU, OG1RF_10908

Description : L-ribulose-5-phosphate 3-epimerase [Ensembl]. Xylose isomerase-like TIM barrel [Interproscan].

Gene families : OG_02_0001386 (OrthoFinder) Phylogenetic Tree(s): OG0001386_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AEA93595
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC77154 ulaE, b4197 L-xylulose 5-phosphate 3-epimerase [Ensembl]. Xylose... 0.07 OrthoFinder
AAL00648 spr1845, sga Hexulose-6-phosphate isomerase [Ensembl]. Xylose... 0.04 OrthoFinder
AAL22535 STM3676, sgbU putative 3-hexulose-6-phosphate isomerase [Ensembl].... 0.03 OrthoFinder
AAL23207 STM4387, sgaU putative hexulose-6-phosphate isomerase [Ensembl].... 0.05 OrthoFinder
AGT26296 N559_4704 L-xylulose 5-phosphate 3-epimerase [Ensembl]. TIM barrel... 0.07 OrthoFinder
CCG26478 No alias L-xylulose 5-phosphate 3-epimerase [Ensembl]. Xylose... 0.07 OrthoFinder
KNA52269 VCV51_033435 hexulose-6-phosphate isomerase [Ensembl]. Xylose... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004565 beta-galactosidase activity IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0006050 mannosamine metabolic process IEP Enrichment
BP GO:0006051 N-acetylmannosamine metabolic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
CC GO:0009341 beta-galactosidase complex IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0015925 galactosidase activity IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP Enrichment
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Enrichment
MF GO:0043546 molybdopterin cofactor binding IEP Enrichment
MF GO:0047465 N-acylglucosamine-6-phosphate 2-epimerase activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Enrichment
InterPro domains Description Start Stop
IPR013022 Xyl_isomerase-like_TIM-brl 21 233
No external refs found!