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  5. AHY39937

AHY39937 (CJ8421_03490)


Aliases : CJ8421_03490

Description : putative ribosomal pseudouridine synthase [Ensembl]. RNA pseudouridylate synthase [Interproscan].


Gene families : OG_02_0000046 (OrthoFinder) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AHY39937
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
CRO46859 rluC Ribosomal large subunit pseudouridine synthase C... 0.03 OrthoFinder
EDJ90580 CGSHi22421_01207 SfhB [Ensembl]. S4 domain, RNA pseudouridylate synthase... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001216 DNA-binding transcription activator activity IEP Enrichment
BP GO:0001514 selenocysteine incorporation IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006451 translational readthrough IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
MF GO:0008961 phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006145 PsdUridine_synth_RsuA/RluA 73 195
No external refs found!