AEA94365 (OG1RF_11678)

Aliases : OG1RF_11678

Description : ABC superfamily ATP binding cassette transporter, membrane protein [Ensembl]. ABC 3 transport family [Interproscan].

Gene families : OG_02_0000141 (OrthoFinder) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AEA94365
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AAC74929 znuB, b1859 zinc ABC transporter permease [Ensembl]. ABC 3 transport... 0.02 OrthoFinder
AAL00297 spr1493, psaC ABC transporter membrane-spanning permease-manganese... 0.04 OrthoFinder
AAL00778 spr1976, adcB ABC transporter membrane-spanning permease-Zinc (Zn2+)... 0.03 OrthoFinder
AAL21743 STM2863, sitC fur regulated Salmonella iron transporter [Ensembl]. ABC... 0.03 OrthoFinder
AAL21744 STM2864, sitD fur regulated Salmonella iron transporter [Ensembl]. ABC... 0.03 OrthoFinder
AGT22922 N559_1153 iron transporter: fur regulated [Ensembl]. ABC 3... 0.04 OrthoFinder
AGT22923 N559_1154 iron transport system inner membrane permease component... 0.03 OrthoFinder
AGT22969 N559_1203 putative ABC transport system permease component... 0.03 OrthoFinder
AKI49843 mntC, L2625_01990 manganese ABC transporter, permease protein [Ensembl].... 0.04 OrthoFinder
AKP15480 mntB, WX61_01434 Manganese transport system membrane protein MntB... 0.04 OrthoFinder
CCG26737 SitD Manganese ABC transporter, inner membrane permease... 0.06 OrthoFinder
CPC53217 sitD, ERS093114_00721 Manganese ABC transporter%2C inner membrane permease... 0.04 OrthoFinder
CRO76540 znuB_1 High-affinity zinc uptake system membrane protein ZnuB... 0.03 OrthoFinder
CRP72736 znuB_2 High-affinity zinc uptake system membrane protein ZnuB... 0.02 OrthoFinder
EDJ90087 CGSHi22421_06573 iron (chelated) ABC transporter permease protein... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005887 integral component of plasma membrane IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
BP GO:0007267 cell-cell signaling IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008962 phosphatidylglycerophosphatase activity IEP Enrichment
BP GO:0009372 quorum sensing IEP Enrichment
BP GO:0009405 obsolete pathogenesis IEP Enrichment
BP GO:0009595 detection of biotic stimulus IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
BP GO:0023052 signaling IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0044764 multi-organism cellular process IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0051704 multi-organism process IEP Enrichment
BP GO:0060245 detection of cell density IEP Enrichment
InterPro domains Description Start Stop
IPR001626 ABC_TroCD 12 266
No external refs found!