AEA94928 (OG1RF_12241)

Aliases : OG1RF_12241

Description : LysR family transcriptional regulator [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].

Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AEA94928
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
AAC76943	oxyR, b3961	oxidative and nitrosative stress transcriptional...	0.05	OrthoFinder
AAL19636	STM0692	putative LysR family transcriptional regulator...	0.03	OrthoFinder
AGT23255	N559_1502	putative LysR-family transcriptional regulator...	0.03	OrthoFinder
AGT23447	N559_1705	LysR family transcriptional regulator [Ensembl]. LysR...	0.04	OrthoFinder
AGT26415	N559_4829	LysR family transcriptional regulator [Ensembl]. LysR...	0.05	OrthoFinder
AGT26606	N559_5029, OxyR	DNA-binding transcriptional regulator OxyR [Ensembl]....	0.03	OrthoFinder
AGT26618	N559_5041	putative LysR-family transcriptional regulator...	0.06	OrthoFinder
AHY40206	CJ8421_04960	putative transcriptional regulator (lysR family) protein...	0.03	OrthoFinder
AKI48958	L2625_01040	transcriptional regulator, LysR family [Ensembl]....	0.05	OrthoFinder
CCL18208	BN171_2160004	Transcriptional regulator, LysR family [Ensembl]. LysR...	0.03	OrthoFinder
CRO06947	cysB	Cys regulon transcriptional activator [Ensembl]. LysR...	0.03	OrthoFinder
CRO86371	oxyR_2	Morphology and auto-aggregation control protein...	0.02	OrthoFinder
CRO97148	gltC_4	HTH-type transcriptional regulator GltC [Ensembl]. LysR...	0.02	OrthoFinder
CRP00540	cysL_3	CysJI operon transcriptional activator [Ensembl]. LysR...	0.02	OrthoFinder
CRP03013	gltC_5	HTH-type transcriptional regulator GltC [Ensembl]. LysR...	0.02	OrthoFinder
CRP05348	cmpR_4	HTH-type transcriptional activator CmpR [Ensembl]. LysR...	0.02	OrthoFinder
KNA54936	VCV51_031768	LysR substrate binding domain-containing protein...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Enrichment
MF	GO:0004357	glutamate-cysteine ligase activity	IEP	Enrichment
MF	GO:0004555	alpha,alpha-trehalase activity	IEP	Enrichment
MF	GO:0004672	protein kinase activity	IEP	Enrichment
MF	GO:0004673	protein histidine kinase activity	IEP	Enrichment
BP	GO:0005984	disaccharide metabolic process	IEP	Enrichment
BP	GO:0005991	trehalose metabolic process	IEP	Enrichment
BP	GO:0006040	amino sugar metabolic process	IEP	Enrichment
BP	GO:0006050	mannosamine metabolic process	IEP	Enrichment
BP	GO:0006051	N-acetylmannosamine metabolic process	IEP	Enrichment
BP	GO:0006749	glutathione metabolic process	IEP	Enrichment
BP	GO:0006750	glutathione biosynthetic process	IEP	Enrichment
BP	GO:0007165	signal transduction	IEP	Enrichment
BP	GO:0009311	oligosaccharide metabolic process	IEP	Enrichment
MF	GO:0015298	solute:cation antiporter activity	IEP	Enrichment
MF	GO:0015299	solute:proton antiporter activity	IEP	Enrichment
MF	GO:0015927	trehalase activity	IEP	Enrichment
BP	GO:0016043	cellular component organization	IEP	Enrichment
BP	GO:0016311	dephosphorylation	IEP	Enrichment
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Enrichment
MF	GO:0016881	acid-amino acid ligase activity	IEP	Enrichment
BP	GO:0019184	nonribosomal peptide biosynthetic process	IEP	Enrichment
MF	GO:0022853	active ion transmembrane transporter activity	IEP	Enrichment
BP	GO:0043647	inositol phosphate metabolic process	IEP	Enrichment
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Enrichment
BP	GO:0044282	small molecule catabolic process	IEP	Enrichment
BP	GO:0045229	external encapsulating structure organization	IEP	Enrichment
BP	GO:0046164	alcohol catabolic process	IEP	Enrichment
BP	GO:0046174	polyol catabolic process	IEP	Enrichment
BP	GO:0046838	phosphorylated carbohydrate dephosphorylation	IEP	Enrichment
BP	GO:0046855	inositol phosphate dephosphorylation	IEP	Enrichment
MF	GO:0047465	N-acylglucosamine-6-phosphate 2-epimerase activity	IEP	Enrichment
BP	GO:0071545	inositol phosphate catabolic process	IEP	Enrichment
BP	GO:0071554	cell wall organization or biogenesis	IEP	Enrichment
BP	GO:0071555	cell wall organization	IEP	Enrichment
MF	GO:0140299	small molecule sensor activity	IEP	Enrichment
BP	GO:1901616	organic hydroxy compound catabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000847	Tscrpt_reg_HTH_LysR	3	62
IPR005119	LysR_subst-bd	89	289

External Links

No external refs found!

AEA94928 (OG1RF_12241)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation