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  5. AHY40107

AHY40107 (rpsA, CJ8421_04420)


Aliases : rpsA, CJ8421_04420

Description : 30S ribosomal protein S1 [Ensembl]. S1 RNA binding domain [Interproscan].


Gene families : OG_02_0000539 (OrthoFinder) Phylogenetic Tree(s): OG0000539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AHY40107
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
CBI66007 rpsA, HPB8_450 small subunit ribosomal protein S1 [Ensembl]. S1 RNA... 0.05 OrthoFinder
CPC76714 rpsA, ERS093114_01242 30S ribosomal protein S1 [Ensembl]. S1 RNA binding... 0.03 OrthoFinder
CRO41659 rpsA 30S ribosomal protein S1 [Ensembl]. S1 RNA binding... 0.02 OrthoFinder
EDJ90972 rpsA, CGSHi22421_02581 30S ribosomal protein S1 [Ensembl]. S1 RNA binding... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004448 isocitrate dehydrogenase activity IEP Enrichment
MF GO:0004450 isocitrate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
MF GO:0015556 C4-dicarboxylate transmembrane transporter activity IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
InterPro domains Description Start Stop
IPR003029 S1_domain 287 358
IPR003029 S1_domain 202 271
IPR003029 S1_domain 33 87
IPR003029 S1_domain 117 182
IPR003029 S1_domain 373 443
IPR003029 S1_domain 457 525
No external refs found!