AAC73634 (sfmD, b0532)

Aliases : sfmD, b0532

Description : putative outer membrane export usher protein [Ensembl]. PapC C-terminal domain, PapC N-terminal domain, Outer membrane usher protein [Interproscan].

Gene families : OG_02_0000166 (OrthoFinder) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAC73634
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
AAL18987	STM0023, bcfC	fimbrial usher [Ensembl]. PapC N-terminal domain, PapC...	0.08	OrthoFinder
AAL19139	STM0175, stiC	putative fimbrial usher [Ensembl]. PapC N-terminal...	0.08	OrthoFinder
AAL19258	STM0301, safC	putative fimbriae usher [Ensembl]. PapC N-terminal...	0.04	OrthoFinder
AAL19292	STM0338, stbC	putative fimbriae; usher [Ensembl]. PapC N-terminal...	0.09	OrthoFinder
AAL19500	STM0546, fimD	outer membrane usher protein [Ensembl]. PapC N-terminal...	0.05	OrthoFinder
AAL21053	STM2150, stcC	putative outer membrane protein [Ensembl]. PapC...	0.05	OrthoFinder
AAL22498	STM3638, lpfC	long polar fimbrial outer membrane usher protein...	0.08	OrthoFinder
AGT25491	N559_3855	fimbrial usher protein [Ensembl]. PapC N-terminal...	0.05	OrthoFinder
AGT26343	N559_4752	putative fimbrial biogenesis outer membrane usher...	0.06	OrthoFinder
AGT26409	N559_4823	putative outer membrane usher protein [Ensembl]. PapC...	0.03	OrthoFinder
CRP82688	fimD	Outer membrane usher protein FimD precursor [Ensembl]....	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009297	pilus assembly	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015288	porin activity	None	Extended
MF	GO:0015473	fimbrial usher porin activity	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022829	wide pore channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0030030	cell projection organization	None	Extended
BP	GO:0030031	cell projection assembly	None	Extended
BP	GO:0043711	pilus organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0007155	cell adhesion	IEP	Enrichment
MF	GO:0008410	CoA-transferase activity	IEP	Enrichment
CC	GO:0009289	pilus	IEP	Enrichment
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	Enrichment
BP	GO:0022610	biological adhesion	IEP	Enrichment
CC	GO:0030288	outer membrane-bounded periplasmic space	IEP	Enrichment
CC	GO:0042597	periplasmic space	IEP	Enrichment
BP	GO:0042908	xenobiotic transport	IEP	Enrichment
BP	GO:0042919	benzoate transport	IEP	Enrichment
MF	GO:0042925	benzoate transmembrane transporter activity	IEP	Enrichment
CC	GO:0042995	cell projection	IEP	Enrichment
BP	GO:0045229	external encapsulating structure organization	IEP	Enrichment
BP	GO:0071554	cell wall organization or biogenesis	IEP	Enrichment
BP	GO:0071555	cell wall organization	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR025949	PapC-like_C	784	848
IPR025885	PapC_N	38	187
IPR000015	Fimb_usher	202	775

External Links

UniProtKB	P77468

AAC73634 (sfmD, b0532)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation