AAC73634 (sfmD, b0532)


Aliases : sfmD, b0532

Description : putative outer membrane export usher protein [Ensembl]. PapC C-terminal domain, PapC N-terminal domain, Outer membrane usher protein [Interproscan].


Gene families : OG_02_0000166 (OrthoFinder) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAC73634
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AAL18987 STM0023, bcfC fimbrial usher [Ensembl]. PapC N-terminal domain, PapC... 0.08 OrthoFinder
AAL19139 STM0175, stiC putative fimbrial usher [Ensembl]. PapC N-terminal... 0.08 OrthoFinder
AAL19258 STM0301, safC putative fimbriae usher [Ensembl]. PapC N-terminal... 0.04 OrthoFinder
AAL19292 STM0338, stbC putative fimbriae; usher [Ensembl]. PapC N-terminal... 0.09 OrthoFinder
AAL19500 STM0546, fimD outer membrane usher protein [Ensembl]. PapC N-terminal... 0.05 OrthoFinder
AAL21053 STM2150, stcC putative outer membrane protein [Ensembl]. PapC... 0.05 OrthoFinder
AAL22498 STM3638, lpfC long polar fimbrial outer membrane usher protein... 0.08 OrthoFinder
AGT25491 N559_3855 fimbrial usher protein [Ensembl]. PapC N-terminal... 0.05 OrthoFinder
AGT26343 N559_4752 putative fimbrial biogenesis outer membrane usher... 0.06 OrthoFinder
AGT26409 N559_4823 putative outer membrane usher protein [Ensembl]. PapC... 0.03 OrthoFinder
CRP82688 fimD Outer membrane usher protein FimD precursor [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0009297 pilus assembly IEA Interproscan
MF GO:0015473 fimbrial usher porin activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0042908 xenobiotic transport IEP Enrichment
BP GO:0042919 benzoate transport IEP Enrichment
MF GO:0042925 benzoate transmembrane transporter activity IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
InterPro domains Description Start Stop
IPR025949 PapC-like_C 784 848
IPR025885 PapC_N 38 187
IPR000015 Fimb_usher 202 775
UniProtKB P77468