AAC74402 (ycjW, b1320)

Aliases : ycjW, b1320

Description : LacI family putative transcriptional repressor [Ensembl]. Bacterial regulatory proteins, Periplasmic binding proteins and sugar binding domain of LacI family [Interproscan].

Gene families : OG_02_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAC74402
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AGT22061 N559_0239 putative transcriptional regulator [Ensembl].... 0.01 OrthoFinder
AGT22953 N559_1185 ascBF operon repressor [Ensembl]. Periplasmic binding... 0.01 OrthoFinder
AGT24386 N559_2710 lac repressor [Ensembl]. Periplasmic binding... 0.02 OrthoFinder
AGT25335 N559_3695 putative periplasmic binding protein/LacI... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR001761 Peripla_BP/Lac1_sug-bd_dom 77 321
IPR000843 HTH_LacI 4 49
UniProtKB P77615