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AAC74893 (cspC, b1823)


Aliases : cspC, b1823

Description : stress protein, member of the CspA-family [Ensembl]. 'Cold-shock' DNA-binding domain [Interproscan].


Gene families : OG_02_0000056 (OrthoFinder) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAC74893
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AAL20752 STM1837, cspC cold shock protein [Ensembl]. 'Cold-shock' DNA-binding... 0.04 OrthoFinder
AEA93200 cspB, OG1RF_10513 cold shock protein B [Ensembl]. 'Cold-shock' DNA-binding... 0.05 OrthoFinder
AEA94912 cspA3, OG1RF_12225 cold shock protein CspA [Ensembl]. 'Cold-shock'... 0.04 OrthoFinder
CCL17057 cspA, BN171_1130011 Cold shock protein [Ensembl]. 'Cold-shock' DNA-binding... 0.01 OrthoFinder
CPC31752 cspA, ERS093114_00015 CSD family cold shock protein [Ensembl]. 'Cold-shock'... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR002059 CSP_DNA-bd 5 68
UniProtKB P0A9Y6