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  5. AAC74905

AAC74905 (rsmF, b1835)


Aliases : rsmF, b1835

Description : 16S rRNA m(5)C1407 methyltransferase, SAM-dependent [Ensembl]. 16S rRNA methyltransferase RsmB/F, N-terminal domain of 16S rRNA methyltransferase RsmF, RNA-binding PUA-like domain of methyltransferase RsmF [Interproscan].


Gene families : OG_02_0000298 (OrthoFinder) Phylogenetic Tree(s): OG0000298_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAC74905
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AAL20765 STM1850, yebU putative rRNA methyltransferase [Ensembl]. 16S rRNA... 0.03 OrthoFinder
AGT23645 N559_1912, RsmF rRNA (cytosine-C(5)-)-methyltransferase RsmF [Ensembl].... 0.03 OrthoFinder
AKI49817 sun, L2625_01964 tRNA and rRNA cytosine-C5-methylase, putative [Ensembl].... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0018106 peptidyl-histidine phosphorylation IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018202 peptidyl-histidine modification IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR027391 Nol1_Nop2_Fmu_2 406 455
IPR031341 Methyltr_RsmF_N 1 90
IPR001678 MeTrfase_RsmB/NOP2 103 294
UniProtKB P76273