Coexpression cluster: Cluster_22 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016491 oxidoreductase activity 23.46% (19/81) 2.2 0.0 2e-06
GO:0055114 obsolete oxidation-reduction process 20.99% (17/81) 2.02 0.0 4.4e-05
GO:0042537 benzene-containing compound metabolic process 2.47% (2/81) 5.68 0.000378 0.003824
GO:0071468 cellular response to acidic pH 2.47% (2/81) 5.68 0.000378 0.003824
GO:0071467 cellular response to pH 2.47% (2/81) 5.68 0.000378 0.003824
GO:0104004 cellular response to environmental stimulus 2.47% (2/81) 5.68 0.000378 0.003824
GO:0010124 phenylacetate catabolic process 2.47% (2/81) 5.68 0.000378 0.003824
GO:0010447 response to acidic pH 2.47% (2/81) 5.68 0.000378 0.003824
GO:0071214 cellular response to abiotic stimulus 2.47% (2/81) 5.68 0.000378 0.003824
GO:0042178 xenobiotic catabolic process 2.47% (2/81) 5.68 0.000378 0.003824
GO:0009628 response to abiotic stimulus 2.47% (2/81) 5.68 0.000378 0.003824
GO:0006805 xenobiotic metabolic process 2.47% (2/81) 5.68 0.000378 0.003824
GO:0009268 response to pH 2.47% (2/81) 5.68 0.000378 0.003824
GO:0032787 monocarboxylic acid metabolic process 6.17% (5/81) 3.41 8e-05 0.004877
GO:0072329 monocarboxylic acid catabolic process 3.7% (3/81) 4.68 0.000138 0.006295
GO:0016054 organic acid catabolic process 3.7% (3/81) 4.26 0.000377 0.00979
GO:0046395 carboxylic acid catabolic process 3.7% (3/81) 4.26 0.000377 0.00979
GO:0006631 fatty acid metabolic process 3.7% (3/81) 4.26 0.000377 0.00979
GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity 2.47% (2/81) 5.09 0.00112 0.010729
GO:0044282 small molecule catabolic process 3.7% (3/81) 3.68 0.001398 0.01272
GO:0003824 catalytic activity 38.27% (31/81) 0.63 0.004569 0.039594
GO:1901575 organic substance catabolic process 4.94% (4/81) 2.47 0.005499 0.043515
GO:0008483 transaminase activity 2.47% (2/81) 4.09 0.00539 0.044588
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_11 0.035 OrthoFinder Compare
Escherichia coli HCCA Cluster_31 0.045 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_1 0.03 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_3 0.031 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_16 0.07 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_18 0.081 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_25 0.053 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_33 0.048 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_36 0.06 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_33 0.027 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_2 0.029 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_14 0.05 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_20 0.029 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_26 0.038 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_46 0.03 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_74 0.053 OrthoFinder Compare
Salmonella enterica HCCA Cluster_6 0.08 OrthoFinder Compare
Salmonella enterica HCCA Cluster_9 0.051 OrthoFinder Compare
Salmonella enterica HCCA Cluster_24 0.038 OrthoFinder Compare
Salmonella enterica HCCA Cluster_27 0.03 OrthoFinder Compare
Salmonella enterica HCCA Cluster_30 0.055 OrthoFinder Compare
Salmonella enterica HCCA Cluster_37 0.028 OrthoFinder Compare
Salmonella enterica HCCA Cluster_40 0.034 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_11 0.028 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_26 0.031 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_27 0.055 OrthoFinder Compare
Sequences (81) (download table)

InterPro Domains

GO Terms

Family Terms