Coexpression cluster: Cluster_38 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043604 amide biosynthetic process 16.13% (10/62) 3.77 0.0 0.0
GO:0006518 peptide metabolic process 16.13% (10/62) 3.8 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 19.35% (12/62) 3.34 0.0 0.0
GO:0043603 cellular amide metabolic process 16.13% (10/62) 3.68 0.0 0.0
GO:0009059 macromolecule biosynthetic process 19.35% (12/62) 3.19 0.0 0.0
GO:0043043 peptide biosynthetic process 16.13% (10/62) 3.83 0.0 0.0
GO:0005840 ribosome 14.52% (9/62) 3.8 0.0 0.0
GO:0043229 intracellular organelle 14.52% (9/62) 3.74 0.0 0.0
GO:0003735 structural constituent of ribosome 14.52% (9/62) 3.74 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 14.52% (9/62) 3.74 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 25.81% (16/62) 2.45 0.0 0.0
GO:0043228 non-membrane-bounded organelle 14.52% (9/62) 3.62 0.0 0.0
GO:0043226 organelle 14.52% (9/62) 3.62 0.0 0.0
GO:0005198 structural molecule activity 14.52% (9/62) 3.62 0.0 0.0
GO:0006412 translation 12.9% (8/62) 3.6 0.0 2e-06
GO:0044271 cellular nitrogen compound biosynthetic process 17.74% (11/62) 2.71 1e-06 5e-06
GO:0044267 cellular protein metabolic process 12.9% (8/62) 3.25 1e-06 1.2e-05
GO:0003676 nucleic acid binding 25.81% (16/62) 1.77 9e-06 7.5e-05
GO:0043170 macromolecule metabolic process 25.81% (16/62) 1.75 1e-05 8.4e-05
GO:1901566 organonitrogen compound biosynthetic process 16.13% (10/62) 2.38 1.5e-05 0.000121
GO:0044249 cellular biosynthetic process 19.35% (12/62) 2.04 2.3e-05 0.000172
GO:0003723 RNA binding 11.29% (7/62) 2.91 3.1e-05 0.00022
GO:1901576 organic substance biosynthetic process 19.35% (12/62) 1.97 3.8e-05 0.000259
GO:0034641 cellular nitrogen compound metabolic process 24.19% (15/62) 1.66 4.3e-05 0.000279
GO:0019538 protein metabolic process 12.9% (8/62) 2.51 6.5e-05 0.000406
GO:0008135 translation factor activity, RNA binding 4.84% (3/62) 4.48 0.000252 0.001413
GO:0090079 translation regulator activity, nucleic acid binding 4.84% (3/62) 4.48 0.000252 0.001413
GO:0009058 biosynthetic process 19.35% (12/62) 1.69 0.00024 0.001451
GO:0045182 translation regulator activity 4.84% (3/62) 4.32 0.000356 0.001929
GO:0044237 cellular metabolic process 27.42% (17/62) 1.16 0.000888 0.004648
GO:0003746 translation elongation factor activity 3.23% (2/62) 5.06 0.001299 0.006372
GO:0000150 DNA strand exchange activity 3.23% (2/62) 5.06 0.001299 0.006372
GO:0006807 nitrogen compound metabolic process 24.19% (15/62) 1.18 0.001708 0.008127
GO:0006414 translational elongation 3.23% (2/62) 4.74 0.002144 0.009899
GO:1901564 organonitrogen compound metabolic process 16.13% (10/62) 1.35 0.004976 0.022322
GO:0110165 cellular anatomical entity 27.42% (17/62) 0.91 0.005985 0.026101
GO:0071704 organic substance metabolic process 27.42% (17/62) 0.89 0.006844 0.029042
GO:0044238 primary metabolic process 24.19% (15/62) 0.94 0.008483 0.035049
GO:0005575 cellular_component 27.42% (17/62) 0.84 0.009744 0.039226
GO:0008097 5S rRNA binding 1.61% (1/62) 6.06 0.014976 0.047024
GO:0006402 mRNA catabolic process 1.61% (1/62) 6.06 0.014976 0.047024
GO:0006401 RNA catabolic process 1.61% (1/62) 6.06 0.014976 0.047024
GO:0006109 regulation of carbohydrate metabolic process 1.61% (1/62) 6.06 0.014976 0.047024
GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity 1.61% (1/62) 6.06 0.014976 0.047024
GO:0008320 protein transmembrane transporter activity 1.61% (1/62) 6.06 0.014976 0.047024
GO:0016071 mRNA metabolic process 1.61% (1/62) 6.06 0.014976 0.047024
GO:0140318 protein transporter activity 1.61% (1/62) 6.06 0.014976 0.047024
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Clostridioides difficile HCCA Cluster_6 0.031 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_18 0.064 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_7 0.035 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_9 0.028 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_8 0.057 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_34 0.062 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_17 0.037 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_6 0.038 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_15 0.03 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_22 0.027 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_63 0.032 OrthoFinder Compare
Salmonella enterica HCCA Cluster_23 0.059 OrthoFinder Compare
Salmonella enterica HCCA Cluster_44 0.059 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_3 0.055 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_24 0.031 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_13 0.031 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_11 0.031 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_24 0.04 OrthoFinder Compare
Sequences (62) (download table)

InterPro Domains

GO Terms

Family Terms