Coexpression cluster: Cluster_18 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043226 organelle 21.28% (10/47) 3.71 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 21.28% (10/47) 3.71 0.0 0.0
GO:0043228 non-membrane-bounded organelle 21.28% (10/47) 3.71 0.0 0.0
GO:0005198 structural molecule activity 21.28% (10/47) 3.71 0.0 0.0
GO:0003735 structural constituent of ribosome 21.28% (10/47) 3.71 0.0 0.0
GO:0043229 intracellular organelle 21.28% (10/47) 3.71 0.0 0.0
GO:0005840 ribosome 21.28% (10/47) 3.78 0.0 0.0
GO:0006412 translation 19.15% (9/47) 3.59 0.0 0.0
GO:0043604 amide biosynthetic process 19.15% (9/47) 3.52 0.0 0.0
GO:0006518 peptide metabolic process 19.15% (9/47) 3.52 0.0 0.0
GO:0043043 peptide biosynthetic process 19.15% (9/47) 3.52 0.0 0.0
GO:0043603 cellular amide metabolic process 19.15% (9/47) 3.49 0.0 0.0
GO:0044267 cellular protein metabolic process 19.15% (9/47) 3.3 0.0 1e-06
GO:0034645 cellular macromolecule biosynthetic process 19.15% (9/47) 3.04 1e-06 7e-06
GO:0009059 macromolecule biosynthetic process 19.15% (9/47) 2.86 2e-06 1.9e-05
GO:0019538 protein metabolic process 19.15% (9/47) 2.8 3e-06 2.6e-05
GO:1901566 organonitrogen compound biosynthetic process 19.15% (9/47) 2.66 7e-06 5.4e-05
GO:0044271 cellular nitrogen compound biosynthetic process 19.15% (9/47) 2.54 1.5e-05 0.000104
GO:0044260 cellular macromolecule metabolic process 19.15% (9/47) 2.28 6.5e-05 0.000436
GO:0044249 cellular biosynthetic process 19.15% (9/47) 1.99 0.000297 0.001898
GO:1901576 organic substance biosynthetic process 19.15% (9/47) 1.97 0.000335 0.002041
GO:0009987 cellular process 36.17% (17/47) 1.07 0.001345 0.007486
GO:0009058 biosynthetic process 19.15% (9/47) 1.7 0.001334 0.007763
GO:0110165 cellular anatomical entity 27.66% (13/47) 1.23 0.002276 0.012137
GO:1901564 organonitrogen compound metabolic process 19.15% (9/47) 1.58 0.00238 0.012188
GO:0044237 cellular metabolic process 25.53% (12/47) 1.24 0.003246 0.015387
GO:0019843 rRNA binding 4.26% (2/47) 4.46 0.00314 0.015457
GO:0005575 cellular_component 27.66% (13/47) 1.15 0.003613 0.016515
GO:0045454 cell redox homeostasis 4.26% (2/47) 4.19 0.004655 0.017524
GO:0045184 establishment of protein localization 4.26% (2/47) 4.19 0.004655 0.017524
GO:0033036 macromolecule localization 4.26% (2/47) 4.19 0.004655 0.017524
GO:0015031 protein transport 4.26% (2/47) 4.19 0.004655 0.017524
GO:0008104 protein localization 4.26% (2/47) 4.19 0.004655 0.017524
GO:0043170 macromolecule metabolic process 19.15% (9/47) 1.44 0.004647 0.020512
GO:0019725 cellular homeostasis 4.26% (2/47) 3.97 0.006441 0.022902
GO:0034641 cellular nitrogen compound metabolic process 19.15% (9/47) 1.37 0.006397 0.023395
GO:0042592 homeostatic process 4.26% (2/47) 3.78 0.008489 0.029367
GO:0003723 RNA binding 8.51% (4/47) 2.11 0.012934 0.043568
GO:0065008 regulation of biological quality 4.26% (2/47) 3.46 0.01333 0.043749
GO:0050380 undecaprenyl-diphosphatase activity 2.13% (1/47) 5.78 0.018224 0.046654
GO:0140318 protein transporter activity 2.13% (1/47) 5.78 0.018224 0.046654
GO:0071692 protein localization to extracellular region 2.13% (1/47) 5.78 0.018224 0.046654
GO:0046903 secretion 2.13% (1/47) 5.78 0.018224 0.046654
GO:0008320 protein transmembrane transporter activity 2.13% (1/47) 5.78 0.018224 0.046654
GO:0009306 protein secretion 2.13% (1/47) 5.78 0.018224 0.046654
GO:0035592 establishment of protein localization to extracellular region 2.13% (1/47) 5.78 0.018224 0.046654
GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity 2.13% (1/47) 5.78 0.018224 0.046654
GO:0032940 secretion by cell 2.13% (1/47) 5.78 0.018224 0.046654
GO:0022884 macromolecule transmembrane transporter activity 2.13% (1/47) 5.78 0.018224 0.046654
GO:0140352 export from cell 2.13% (1/47) 5.78 0.018224 0.046654
GO:0016462 pyrophosphatase activity 4.26% (2/47) 3.19 0.019102 0.047943
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_8 0.055 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_2 0.045 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_6 0.027 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_22 0.028 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_25 0.033 OrthoFinder Compare
Escherichia coli HCCA Cluster_1 0.078 OrthoFinder Compare
Escherichia coli HCCA Cluster_38 0.064 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_17 0.068 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_18 0.034 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_9 0.048 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_8 0.034 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_12 0.087 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_34 0.028 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_2 0.057 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_16 0.028 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_22 0.032 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_26 0.03 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_27 0.028 OrthoFinder Compare
Mycoplasma pneumoniae HCAA Cluster_3 0.037 OrthoFinder Compare
Mycoplasma pneumoniae HCAA Cluster_5 0.036 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_25 0.05 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_6 0.034 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_14 0.037 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_22 0.045 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_63 0.048 OrthoFinder Compare
Salmonella enterica HCCA Cluster_23 0.126 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_3 0.05 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_12 0.03 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_19 0.029 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_24 0.083 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_27 0.044 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_7 0.055 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_13 0.094 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_1 0.047 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_4 0.05 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_12 0.027 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_8 0.048 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_24 0.064 OrthoFinder Compare
Sequences (47) (download table)

InterPro Domains

GO Terms

Family Terms