Coexpression cluster: Cluster_14 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043570 maintenance of DNA repeat elements 2.38% (2/84) 5.62 0.000407 0.008318
GO:0043571 maintenance of CRISPR repeat elements 2.38% (2/84) 5.62 0.000407 0.008318
GO:0006064 glucuronate catabolic process 2.38% (2/84) 5.62 0.000407 0.008318
GO:0006063 uronic acid metabolic process 2.38% (2/84) 5.62 0.000407 0.008318
GO:0019585 glucuronate metabolic process 2.38% (2/84) 5.62 0.000407 0.008318
GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system 7.14% (6/84) 2.89 0.000129 0.01185
GO:0008643 carbohydrate transport 7.14% (6/84) 2.62 0.000362 0.016639
GO:0015144 carbohydrate transmembrane transporter activity 5.95% (5/84) 3.04 0.000292 0.017891
GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity 5.95% (5/84) 3.3 0.000118 0.021672
GO:0022857 transmembrane transporter activity 15.48% (13/84) 1.24 0.002831 0.043412
GO:0005215 transporter activity 15.48% (13/84) 1.24 0.002831 0.043412
GO:0071702 organic substance transport 9.52% (8/84) 1.73 0.002585 0.047571
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Clostridioides difficile HCCA Cluster_10 0.043 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_13 0.04 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_16 0.052 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_8 0.029 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_14 0.052 OrthoFinder Compare
Escherichia coli HCCA Cluster_30 0.068 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_2 0.035 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_3 0.028 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_5 0.048 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_7 0.029 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_3 0.046 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_16 0.046 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_18 0.042 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_30 0.065 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_31 0.032 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_43 0.027 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_47 0.042 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_7 0.03 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_17 0.03 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_23 0.033 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_12 0.028 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_14 0.03 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_33 0.028 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_36 0.038 OrthoFinder Compare
Salmonella enterica HCCA Cluster_6 0.054 OrthoFinder Compare
Salmonella enterica HCCA Cluster_9 0.033 OrthoFinder Compare
Salmonella enterica HCCA Cluster_11 0.039 OrthoFinder Compare
Salmonella enterica HCCA Cluster_13 0.027 OrthoFinder Compare
Salmonella enterica HCCA Cluster_25 0.076 OrthoFinder Compare
Salmonella enterica HCCA Cluster_37 0.049 OrthoFinder Compare
Salmonella enterica HCCA Cluster_38 0.08 OrthoFinder Compare
Salmonella enterica HCCA Cluster_46 0.03 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_11 0.04 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_6 0.076 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_12 0.033 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_12 0.03 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_21 0.03 OrthoFinder Compare
Sequences (84) (download table)

InterPro Domains

GO Terms

Family Terms