Coexpression cluster: Cluster_1 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0051716 cellular response to stimulus 8.62% (5/58) 3.76 2.6e-05 0.001736
GO:0033554 cellular response to stress 8.62% (5/58) 3.81 2.2e-05 0.002177
GO:0006950 response to stress 8.62% (5/58) 3.53 5.9e-05 0.002907
GO:0006974 cellular response to DNA damage stimulus 8.62% (5/58) 3.92 1.5e-05 0.002971
GO:0006281 DNA repair 6.9% (4/58) 3.77 0.000175 0.003137
GO:0008409 5'-3' exonuclease activity 3.45% (2/58) 6.29 0.000159 0.003141
GO:0035312 5'-3' exodeoxyribonuclease activity 3.45% (2/58) 6.29 0.000159 0.003141
GO:0090305 nucleic acid phosphodiester bond hydrolysis 3.45% (2/58) 6.29 0.000159 0.003141
GO:0051908 double-stranded DNA 5'-3' exodeoxyribonuclease activity 3.45% (2/58) 6.29 0.000159 0.003141
GO:0008309 double-stranded DNA exodeoxyribonuclease activity 3.45% (2/58) 6.29 0.000159 0.003141
GO:0003677 DNA binding 17.24% (10/58) 1.89 0.000283 0.004644
GO:0050896 response to stimulus 8.62% (5/58) 3.26 0.000148 0.00585
GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters 3.45% (2/58) 5.29 0.000941 0.011587
GO:0004536 deoxyribonuclease activity 3.45% (2/58) 5.29 0.000941 0.011587
GO:0004529 exodeoxyribonuclease activity 3.45% (2/58) 5.29 0.000941 0.011587
GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 3.45% (2/58) 5.29 0.000941 0.011587
GO:0090304 nucleic acid metabolic process 13.79% (8/58) 1.93 0.001024 0.011861
GO:0003676 nucleic acid binding 18.97% (11/58) 1.51 0.001311 0.014344
GO:0003678 DNA helicase activity 3.45% (2/58) 4.97 0.001556 0.015322
GO:0003684 damaged DNA binding 3.45% (2/58) 4.97 0.001556 0.015322
GO:0016787 hydrolase activity 15.52% (9/58) 1.66 0.001853 0.017383
GO:0006139 nucleobase-containing compound metabolic process 15.52% (9/58) 1.64 0.002032 0.018195
GO:0140097 catalytic activity, acting on DNA 6.9% (4/58) 2.68 0.003277 0.026898
GO:0004386 helicase activity 3.45% (2/58) 4.49 0.003214 0.027524
GO:0006259 DNA metabolic process 8.62% (5/58) 2.26 0.003633 0.02863
GO:0004527 exonuclease activity 3.45% (2/58) 4.13 0.005419 0.038129
GO:0006725 cellular aromatic compound metabolic process 15.52% (9/58) 1.43 0.005334 0.038915
GO:0043170 macromolecule metabolic process 17.24% (10/58) 1.34 0.005137 0.038923
GO:0046483 heterocycle metabolic process 15.52% (9/58) 1.41 0.005887 0.039993
GO:1901360 organic cyclic compound metabolic process 15.52% (9/58) 1.39 0.006331 0.041574
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Enterococcus faecalis HCCA Cluster_29 0.031 OrthoFinder Compare
Escherichia coli HCCA Cluster_25 0.038 OrthoFinder Compare
Escherichia coli HCCA Cluster_41 0.037 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_10 0.15 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_7 0.048 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_32 0.052 OrthoFinder Compare
Sequences (58) (download table)

InterPro Domains

GO Terms

Family Terms