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(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL19061 (polB) | 1.54 | 0.75 | 0.57 | -0.09 | -0.48 | -2.58 | -1.41 | 0.2 | -0.41 | -1.01 | 0.34 | -0.33 | 0.5 | 0.35 | -0.84 | -1.42 | -1.45 | -0.04 | 0.01 | 0.04 | -1.33 | -0.8 | -1.86 | 0.44 | -0.77 | -0.53 | -0.13 | 0.24 | 1.47 | -2.85 | -0.51 | 0.23 | 1.57 | -1.24 | -1.49 | -0.51 | 1.01 | -0.1 | 0.15 |
AAL19098 (lpxC) | 0.23 | 0.06 | 0.01 | 0.28 | -0.66 | 0.72 | -0.88 | 0.21 | 0.5 | 0.26 | 1.14 | -0.12 | 0.02 | 0.89 | -1.16 | 0.29 | -1.83 | -0.4 | -0.36 | -0.13 | -1.44 | -0.21 | 0.26 | -0.9 | -0.89 | -0.32 | -0.26 | 0.52 | 1.08 | -1.9 | -0.16 | -0.23 | 1.24 | 0.44 | -1.95 | -0.52 | -0.61 | -0.69 | -0.09 |
AAL19270 (dinP) | 1.31 | 0.79 | 0.17 | -0.52 | 0.02 | -2.74 | -1.25 | -0.27 | 0.21 | -0.94 | 1.21 | -1.22 | 0.24 | -0.6 | -0.57 | -0.96 | -0.21 | -0.51 | -0.55 | -0.26 | -1.99 | 0.2 | -0.69 | 0.91 | -0.99 | -1.11 | -0.85 | 0.47 | 1.03 | -2.69 | -1.37 | 0.2 | 0.97 | -0.49 | -0.4 | -1.13 | 1.79 | 0.31 | -0.16 |
AAL19363 (STM0409) | -0.36 | 0.09 | -0.36 | 0.32 | -1.26 | -0.83 | 0.78 | -0.05 | -1.15 | -0.5 | -1.0 | -1.18 | -0.42 | -0.01 | 0.38 | -0.37 | -0.61 | 0.41 | 0.59 | 0.84 | 0.14 | -0.73 | -0.61 | 0.5 | 0.0 | -0.96 | -1.0 | -0.11 | 2.74 | -2.75 | -1.49 | -0.62 | -0.56 | -0.39 | -0.36 | -0.94 | 0.78 | -1.29 | -0.2 |
AAL19735 (uvrB) | 0.02 | 0.26 | -0.38 | -0.27 | -0.81 | -1.84 | 0.83 | 0.4 | 0.28 | -0.83 | 0.2 | -0.29 | 0.28 | 0.55 | 0.22 | -0.54 | -0.28 | 0.8 | 0.77 | 0.74 | -1.02 | -0.61 | -0.86 | -0.17 | -0.96 | -0.56 | -0.7 | 0.21 | 0.82 | -3.55 | -0.17 | -0.76 | 0.73 | -0.64 | 1.02 | -0.98 | 0.71 | -0.34 | -0.21 |
AAL19758 (dinG) | 1.48 | 0.21 | -0.66 | 0.14 | 0.41 | -2.81 | -0.62 | 0.42 | -0.47 | -0.99 | -0.3 | -0.41 | -0.11 | 0.56 | 0.75 | -1.03 | -0.47 | 0.17 | 0.51 | 0.46 | -2.24 | -0.92 | -0.69 | 0.38 | -1.98 | -0.91 | -0.93 | 0.06 | 1.24 | -3.1 | -0.88 | 0.46 | 1.19 | -1.22 | 0.13 | -0.88 | 0.76 | -0.19 | 0.6 |
AAL19759 (ybiB) | 0.45 | 0.64 | 0.46 | 0.02 | 0.02 | -0.95 | -0.78 | 0.25 | -0.53 | -0.1 | -0.33 | -0.43 | 0.76 | 0.57 | -0.69 | -0.85 | -2.12 | -1.04 | -0.9 | -0.77 | -0.23 | -0.82 | -1.39 | -0.11 | 0.45 | 0.22 | 0.18 | 0.12 | 1.39 | -3.23 | -0.01 | 0.45 | 1.33 | -1.0 | -1.37 | -0.32 | 0.26 | -0.33 | 1.18 |
AAL19842 (STM0906) | -3.56 | -0.89 | -2.26 | 2.06 | -3.95 | -4.9 | -4.98 | -3.63 | - | -2.73 | - | -7.94 | -1.31 | -5.19 | -3.82 | - | -6.07 | -3.45 | -3.6 | -3.22 | -3.82 | -1.55 | - | - | -2.07 | -2.47 | - | -3.96 | 3.36 | -5.93 | -2.94 | -2.81 | 4.36 | - | -7.33 | - | - | -0.76 | -2.16 |
AAL19843 (STM0907) | -4.37 | -1.42 | -2.31 | 1.77 | -4.17 | -4.45 | -4.79 | -1.97 | -6.48 | -2.87 | -6.19 | -8.46 | -1.57 | -2.62 | -4.67 | -5.18 | -3.49 | -5.04 | -4.19 | -4.13 | -4.39 | -1.65 | -9.54 | -0.23 | -2.31 | -2.76 | -10.33 | -3.93 | 3.33 | -6.27 | -2.84 | -2.91 | 4.29 | -5.75 | -3.98 | - | 0.07 | -0.31 | -2.59 |
AAL19844 (STM0908) | -4.17 | -1.21 | -2.03 | 2.0 | -3.75 | -4.38 | -5.28 | -2.8 | -10.42 | -2.76 | -8.71 | -7.12 | -1.31 | -3.15 | -6.31 | - | -5.43 | -4.87 | -4.18 | -4.54 | -3.27 | -1.43 | - | - | -2.19 | -2.5 | -6.35 | -3.73 | 3.38 | -6.43 | -3.45 | -2.4 | 4.35 | - | -6.08 | -7.48 | - | -0.32 | -2.05 |
AAL19943 (STM1009) | -2.26 | -0.07 | -0.45 | 1.75 | -2.58 | -2.33 | -2.67 | -1.43 | -2.62 | -2.41 | -1.83 | -4.53 | -1.09 | -1.88 | -1.78 | -11.45 | -5.15 | -1.55 | -1.2 | -1.27 | -2.36 | -2.21 | - | - | -1.7 | -2.95 | - | -1.41 | 3.72 | -5.04 | -1.75 | -1.02 | 3.78 | - | -3.79 | - | - | -0.91 | -1.39 |
AAL19947 (STM1013) | 0.28 | -0.12 | 1.77 | 0.76 | -2.47 | -0.48 | -2.55 | -0.82 | -0.34 | -1.6 | 0.6 | -3.55 | 0.51 | -1.59 | -2.52 | - | -3.1 | -2.16 | -1.57 | -1.71 | -0.65 | -1.67 | - | 0.68 | 0.25 | -2.7 | -3.45 | -0.29 | 2.77 | -3.61 | -0.53 | -1.02 | 2.73 | - | -1.58 | -4.02 | 1.68 | -0.03 | -1.33 |
AAL20004 (sulA) | 2.13 | -0.01 | -0.13 | 0.75 | -0.29 | -2.68 | -1.55 | -0.35 | -1.51 | -1.86 | -0.84 | -2.39 | -0.42 | -0.08 | -1.04 | -0.23 | -1.68 | -1.73 | -1.38 | -1.29 | -1.73 | -0.33 | -0.17 | -1.42 | -0.37 | -2.09 | -1.13 | 0.76 | 2.63 | -3.75 | -1.72 | -0.44 | 2.54 | 0.01 | -0.71 | -1.62 | -0.18 | -0.02 | -0.62 |
AAL20092 (dinI) | 0.43 | 0.21 | -0.79 | 0.13 | -0.47 | -0.93 | -0.66 | -0.12 | -0.33 | -0.92 | 0.56 | -1.17 | -0.2 | 0.66 | 0.18 | -0.54 | -0.68 | -1.86 | -2.58 | -2.25 | -1.7 | 0.48 | -1.34 | -1.43 | -0.44 | 0.06 | -0.08 | -0.06 | 2.19 | -0.24 | -2.5 | -0.95 | 2.31 | -0.69 | 0.49 | -0.9 | -0.21 | 0.87 | -0.45 |
AAL20234 (STM1309) | 0.35 | 0.32 | 0.34 | 0.04 | -0.5 | -2.41 | -0.99 | 0.16 | -0.31 | -0.84 | 0.55 | -1.25 | 0.38 | 0.43 | -1.31 | -1.04 | -1.8 | -0.01 | -0.29 | 0.14 | -0.78 | 0.1 | -1.89 | 0.26 | -0.0 | -0.64 | -0.95 | 0.72 | 1.88 | -2.18 | 0.24 | -0.24 | 1.93 | -1.08 | -1.14 | -1.57 | 0.96 | 0.16 | -0.52 |
AAL20785 (STM1869A) | -2.35 | 0.66 | 1.51 | 1.12 | -0.58 | -1.49 | -2.56 | -0.9 | -2.15 | -1.2 | -1.41 | -5.08 | 0.91 | -0.9 | -2.34 | -2.25 | -3.74 | -2.28 | -1.98 | -1.81 | -2.71 | -1.8 | -0.71 | -3.82 | -0.91 | -2.03 | -3.42 | -0.12 | 3.1 | -3.24 | 0.79 | 0.64 | 2.71 | -1.71 | -2.09 | -3.11 | -3.91 | 1.15 | 0.49 |
AAL20786 (STM1870) | -1.67 | 1.14 | 0.61 | 1.28 | -1.65 | -0.8 | -1.26 | -2.08 | -4.33 | -1.76 | -3.14 | -4.23 | -0.17 | -4.05 | -1.07 | -3.98 | -4.87 | 0.64 | 0.71 | 0.85 | -2.05 | -2.12 | -4.02 | -5.9 | -0.3 | -3.45 | -3.56 | -0.35 | 3.44 | -5.9 | -3.94 | 0.31 | 2.78 | -3.95 | -4.12 | -4.63 | -4.62 | 0.58 | -0.13 |
AAL20796 (yebE) | 0.38 | -0.24 | 0.11 | 0.93 | -1.22 | -3.37 | -1.38 | -0.16 | -1.96 | -1.13 | -0.97 | -2.53 | 0.73 | -0.89 | -2.19 | -0.2 | -2.49 | -1.62 | -1.63 | -1.52 | -1.21 | -1.4 | 0.9 | -0.53 | -1.07 | -0.49 | -2.13 | 0.92 | 2.46 | -4.05 | -1.77 | -0.93 | 2.9 | 1.08 | -1.68 | -2.74 | 0.13 | 0.28 | -0.38 |
AAL20797 (yebF) | -0.05 | -0.41 | 1.32 | 0.82 | -0.3 | -1.78 | -1.95 | -2.27 | -2.09 | -1.63 | -1.67 | -2.43 | 1.49 | -2.68 | -3.63 | 0.57 | -3.44 | -3.23 | -3.14 | -2.92 | 0.75 | -0.34 | -3.37 | -2.25 | 0.97 | -0.02 | -1.41 | -0.32 | 2.34 | -3.49 | -1.46 | -1.06 | 3.04 | -0.18 | -3.77 | -2.0 | -1.47 | 1.01 | -0.45 |
AAL20798 (yebG) | 0.11 | -0.72 | -0.46 | 1.21 | -1.08 | -2.91 | -0.78 | -2.02 | -1.78 | -2.07 | -1.2 | -1.38 | 0.13 | -2.02 | 0.51 | -0.37 | -3.16 | -1.41 | -1.47 | -1.18 | -1.33 | -1.91 | -1.33 | -1.67 | -0.23 | -1.68 | -0.96 | -0.35 | 2.76 | -4.08 | -0.83 | -1.17 | 3.26 | 1.1 | -2.9 | -1.25 | -1.07 | 0.77 | -0.82 |
AAL20810 (ruvB) | -0.58 | 0.12 | -0.5 | 0.5 | -1.42 | -2.56 | -0.39 | 0.13 | -0.71 | -0.66 | -0.56 | -0.42 | -0.7 | 1.04 | -0.3 | -2.26 | -0.28 | 0.2 | 0.35 | 0.31 | -1.0 | 0.22 | -2.3 | 0.52 | -0.8 | -0.2 | -0.64 | -0.43 | 2.02 | -3.22 | -1.53 | -1.4 | 2.6 | -2.44 | -0.24 | -0.63 | 0.92 | -0.7 | -0.71 |
AAL20811 (ruvA) | -0.44 | -0.42 | -1.12 | 0.86 | -1.58 | -2.55 | 0.41 | -0.28 | -0.71 | -0.92 | -0.26 | -0.92 | -0.68 | 0.1 | 0.3 | -2.36 | -0.33 | 0.21 | 0.27 | 0.42 | -1.94 | -0.82 | -2.14 | -0.27 | -1.29 | -0.42 | -0.78 | -0.23 | 2.32 | -3.44 | -1.16 | -1.19 | 2.98 | -2.28 | 0.0 | -0.96 | 0.23 | -0.74 | -0.65 |
AAL20851 (yecH) | -0.65 | 0.42 | -1.48 | -0.02 | -0.33 | -4.26 | -1.31 | -0.58 | -0.27 | 0.29 | 0.4 | 0.38 | 0.11 | -4.06 | 0.96 | -0.84 | -2.37 | -0.51 | -0.28 | 0.0 | -3.84 | -0.27 | 0.03 | 0.71 | -2.55 | -3.36 | 0.7 | 0.36 | 1.48 | -4.95 | -0.43 | -0.25 | 2.18 | -1.21 | -2.06 | 1.44 | 1.05 | -1.24 | 0.24 |
AAL20852 (tyrP) | 0.37 | 0.58 | -1.34 | -0.23 | -0.79 | -2.86 | -0.89 | 0.06 | 0.04 | -0.97 | 1.03 | 0.94 | -0.57 | 1.47 | 0.48 | -1.98 | -1.04 | -0.39 | -0.2 | -0.09 | -2.35 | 0.51 | -2.06 | 0.89 | -1.75 | -1.23 | 0.69 | -0.05 | 0.9 | -2.69 | -1.25 | -0.89 | 1.48 | -2.03 | -0.42 | 0.58 | 0.99 | -1.62 | 0.52 |
AAL20877 (yedE) | -0.78 | 0.79 | -1.35 | 0.72 | -0.81 | -0.08 | -1.14 | 0.04 | -0.37 | 0.94 | -0.23 | 0.86 | -0.47 | -1.23 | 0.16 | -2.86 | -1.9 | -0.94 | -0.69 | -0.62 | -3.92 | -0.74 | -2.37 | 0.57 | -3.0 | -0.31 | 0.95 | -1.64 | 1.6 | -1.41 | -0.81 | -1.8 | 2.26 | -3.14 | -0.25 | 0.52 | 1.24 | 1.08 | -1.36 |
AAL20907 (umuC) | 0.74 | 0.02 | -0.2 | 0.91 | -0.6 | -3.05 | -2.13 | -0.93 | -1.93 | -2.22 | -0.45 | -2.17 | 0.2 | -0.9 | -1.56 | -11.14 | -1.65 | -1.02 | -1.31 | -1.05 | -0.26 | -1.34 | - | 0.23 | -0.66 | -1.84 | -2.54 | -0.67 | 2.73 | -5.47 | -1.9 | -0.9 | 2.95 | - | 1.66 | -2.99 | 1.24 | 0.12 | -0.19 |
AAL20908 (umuD) | 0.81 | -0.8 | -1.33 | 0.77 | -0.58 | -3.45 | -1.27 | -1.29 | -1.95 | -2.39 | -0.42 | -2.43 | -0.16 | -1.46 | -1.32 | -11.34 | -0.49 | -1.41 | -1.51 | -1.31 | -2.61 | -1.97 | - | -0.45 | -1.49 | -2.13 | -3.04 | -0.77 | 2.56 | -5.44 | -2.58 | -0.76 | 2.84 | - | 3.01 | -3.74 | 0.68 | 0.29 | -0.27 |
AAL20964 (yeeA) | -0.59 | 0.38 | 0.55 | -0.24 | 0.63 | -1.77 | -1.01 | -0.36 | -0.87 | -0.28 | -0.23 | -1.71 | 1.57 | -0.11 | -1.02 | -0.48 | -1.89 | -0.19 | -0.17 | 0.18 | -0.54 | -0.46 | -0.75 | 0.14 | -0.18 | -0.97 | -0.89 | 0.02 | 1.21 | -3.48 | -0.98 | 0.73 | 1.19 | 0.0 | -0.5 | -1.4 | 0.48 | 1.2 | 1.07 |
AAL20965 (sbmC) | -2.27 | 0.29 | 1.36 | 0.42 | 0.94 | -0.72 | -1.99 | -0.74 | -0.82 | 0.56 | -1.11 | -2.62 | 1.12 | -2.03 | -0.56 | -0.39 | -0.02 | -0.47 | -0.66 | -0.35 | -1.12 | -0.44 | -0.6 | -1.94 | -0.2 | -1.3 | -2.27 | -0.24 | 1.99 | -2.3 | -1.33 | 0.07 | 1.53 | 0.51 | 0.46 | -2.32 | -2.16 | 1.86 | -0.26 |
AAL21137 (STM2235) | -2.57 | 0.58 | -1.59 | 1.81 | -2.88 | -1.55 | -1.98 | 0.13 | -2.09 | -2.06 | -1.13 | -4.21 | -1.55 | -2.1 | -2.26 | -4.13 | -2.62 | -1.58 | -1.91 | -1.6 | -2.26 | 1.04 | - | - | -1.42 | -2.07 | -2.92 | -2.27 | 2.78 | -5.57 | -2.41 | -2.29 | 4.1 | -5.12 | -2.35 | -2.94 | - | -0.86 | -2.3 |
AAL21142 (STM2240) | -1.53 | 0.28 | -1.49 | 1.47 | -1.59 | -0.44 | -1.73 | 0.21 | -1.64 | -1.61 | -1.23 | -3.12 | -0.82 | -1.43 | -1.76 | -2.42 | -3.76 | -1.86 | -1.91 | -1.71 | -0.37 | 1.29 | - | - | -0.9 | -2.25 | -3.44 | -1.72 | 3.18 | -4.46 | -1.66 | -1.36 | 3.66 | -3.01 | -2.65 | -3.92 | -12.89 | -0.93 | -0.73 |
AAL21513 (STM2619) | 0.27 | 0.11 | 0.32 | 1.06 | -0.14 | -2.67 | -4.25 | -0.13 | -0.55 | -1.59 | 1.3 | -2.82 | 0.58 | 0.18 | -2.48 | - | -8.38 | -0.87 | -1.04 | -0.82 | -0.86 | -2.86 | -8.9 | -2.92 | -0.35 | -1.71 | - | 0.18 | 2.94 | -5.45 | -2.31 | 0.47 | 2.93 | - | - | - | -2.2 | 0.4 | 0.89 |
AAL21514 (STM2620) | 1.24 | 1.01 | -0.51 | 0.9 | -1.41 | -3.1 | -1.32 | -0.84 | -0.27 | -0.55 | 1.6 | -3.37 | -0.06 | -0.95 | -2.25 | - | - | -1.9 | -1.88 | -1.35 | -1.69 | 1.01 | - | -0.16 | -0.57 | -1.79 | -6.1 | 0.15 | 2.72 | -0.8 | -1.19 | -0.51 | 2.8 | - | -8.59 | -6.59 | 0.51 | -0.92 | -0.31 |
AAL21521 (STM2627) | 0.28 | -0.12 | 1.77 | 0.76 | -2.47 | -0.48 | -2.55 | -0.82 | -0.34 | -1.6 | 0.6 | -3.55 | 0.51 | -1.59 | -2.52 | - | -3.1 | -2.16 | -1.57 | -1.71 | -0.65 | -1.67 | - | 0.68 | 0.25 | -2.7 | -3.45 | -0.29 | 2.77 | -3.61 | -0.53 | -1.02 | 2.73 | - | -1.58 | -4.02 | 1.68 | -0.03 | -1.33 |
AAL21523 (STM2629) | -1.23 | -1.5 | 1.71 | 1.21 | -2.07 | -0.98 | -3.4 | -3.34 | -4.6 | -2.18 | -3.39 | -4.19 | 1.15 | -4.66 | -6.31 | -8.89 | -3.81 | -5.78 | -6.29 | -6.24 | 0.17 | -5.07 | - | -3.58 | 0.43 | -2.8 | - | -0.09 | 3.32 | -5.67 | -0.55 | -0.07 | 3.4 | - | - | - | -1.93 | 0.98 | -0.37 |
AAL21525 (STM2631) | -2.11 | -11.59 | 0.2 | 1.8 | -3.08 | -2.8 | - | -3.22 | -4.2 | -3.19 | -3.37 | - | -1.55 | -4.86 | - | - | - | -3.74 | -2.88 | -2.95 | -2.21 | - | - | - | -0.98 | -4.22 | - | -1.79 | 3.81 | -3.39 | - | -1.39 | 4.0 | - | - | - | - | -0.16 | -1.92 |
AAL21526 (STM2632) | -2.26 | -0.07 | -0.45 | 1.75 | -2.58 | -2.33 | -2.67 | -1.43 | -2.62 | -2.41 | -1.83 | -4.53 | -1.09 | -1.88 | -1.78 | -11.45 | -5.15 | -1.55 | -1.2 | -1.27 | -2.36 | -2.21 | - | - | -1.7 | -2.95 | - | -1.41 | 3.72 | -5.04 | -1.75 | -1.02 | 3.78 | - | -3.79 | - | - | -0.91 | -1.39 |
AAL21527 (STM2633) | -2.9 | -2.95 | -0.59 | 1.86 | -2.54 | -2.54 | -7.56 | -2.12 | -3.91 | -2.18 | -3.1 | -5.32 | -1.47 | -3.11 | -16.73 | -5.82 | -5.96 | -1.66 | -2.19 | -1.59 | -4.79 | -4.51 | -5.88 | -7.39 | -2.76 | -3.16 | - | -1.91 | 3.82 | -5.06 | -2.42 | -0.83 | 3.96 | -5.5 | -16.36 | - | -7.12 | -0.92 | -1.69 |
AAL21528 (STM2634) | -1.33 | -0.03 | -0.97 | 1.41 | -1.4 | -2.04 | -1.6 | -1.27 | -2.03 | -1.91 | -0.81 | -2.9 | -0.19 | -2.03 | -3.75 | - | - | -4.43 | -3.61 | -2.99 | -1.62 | -1.97 | - | -1.11 | -2.67 | -2.96 | -2.72 | -1.56 | 3.59 | -4.61 | -1.26 | -0.42 | 3.69 | - | - | -4.02 | -0.11 | -0.37 | -0.44 |
AAL21529 (STM2635) | -0.73 | 0.39 | 0.42 | 1.24 | -0.81 | -1.5 | -2.15 | -0.49 | -0.51 | -1.31 | 0.33 | -1.41 | -0.15 | -0.65 | -2.24 | -9.3 | - | -3.0 | -2.57 | -2.32 | -2.4 | -0.26 | - | - | -0.92 | -1.05 | - | -1.07 | 3.18 | -2.84 | -0.42 | 0.13 | 3.5 | - | - | - | - | 0.06 | -0.52 |
AAL21573 (recN) | 1.15 | 0.36 | -0.67 | 0.26 | -0.45 | -1.79 | -1.54 | -0.66 | 0.29 | -0.99 | 1.03 | -0.49 | -0.44 | -0.25 | -0.56 | -1.48 | -0.96 | -1.83 | -1.75 | -1.6 | -1.78 | -0.02 | -2.15 | -0.4 | -0.94 | -0.33 | 0.23 | 1.28 | 2.29 | -2.84 | -1.97 | -0.76 | 2.18 | -0.69 | 0.03 | -0.82 | 0.48 | 0.39 | -0.6 |
AAL21592 (STM2705) | -1.57 | 0.06 | -1.19 | 1.48 | -2.8 | -1.58 | -0.42 | -0.59 | -2.23 | -1.74 | -1.71 | -5.19 | -0.56 | -1.7 | -1.97 | -2.54 | -0.26 | -1.12 | -0.84 | -0.76 | -2.49 | -0.24 | -5.23 | -1.82 | -1.35 | -2.86 | - | -2.63 | 2.64 | -5.55 | -2.11 | -2.09 | 3.8 | -2.83 | 1.36 | - | -0.35 | 0.47 | -2.06 |
AAL21593 (STM2706) | -3.55 | 0.08 | -1.41 | 1.56 | -2.95 | -1.76 | -1.3 | -0.78 | -4.15 | -2.19 | -3.65 | -4.09 | -0.72 | -1.64 | -2.9 | -2.81 | -0.75 | -5.12 | -4.28 | -4.13 | -3.19 | -1.34 | -4.04 | 0.59 | -2.2 | -2.47 | - | -2.96 | 2.53 | -5.77 | -1.68 | -2.1 | 3.88 | -3.2 | 0.91 | - | 1.83 | 0.43 | -2.11 |
AAL21708 (oraA) | 1.48 | 0.65 | -0.11 | 0.02 | -0.57 | -2.66 | -0.57 | -0.23 | -0.04 | -1.5 | 0.8 | -0.65 | 0.65 | -0.02 | -0.96 | -0.94 | -2.2 | -1.25 | -0.87 | -0.98 | -1.0 | -0.85 | -0.93 | 0.56 | -0.25 | -0.74 | 0.44 | 0.37 | 1.28 | -2.68 | -1.61 | 0.27 | 1.58 | -0.4 | -1.25 | -0.58 | 1.57 | -0.36 | 0.61 |
AAL21709 (recA) | 1.3 | 0.01 | -0.46 | 0.7 | -0.46 | -0.81 | -1.15 | -0.73 | -0.34 | -0.88 | -0.71 | -0.51 | -0.29 | -0.5 | 0.32 | -0.94 | -1.33 | -1.01 | -0.83 | -0.94 | -1.68 | -1.06 | -1.1 | -0.74 | -0.58 | -1.07 | 0.4 | 0.59 | 2.18 | -3.43 | -1.71 | -0.27 | 2.57 | -0.25 | -0.48 | 0.06 | -0.44 | 0.09 | -0.01 |
AAL22379 (STM3517) | -0.53 | 0.65 | 0.29 | 0.81 | -0.47 | -2.84 | 0.12 | 0.08 | -0.02 | -0.48 | 0.89 | -0.99 | 0.05 | -1.22 | 0.52 | 0.68 | -0.66 | -0.76 | -1.06 | -0.52 | -1.53 | 0.18 | 0.12 | -2.81 | -0.83 | -1.23 | -3.94 | 0.07 | -1.24 | -0.5 | -1.31 | -0.54 | 2.45 | 1.78 | 0.39 | -3.78 | -3.15 | 0.37 | 0.13 |
AAL22380 (rtcA) | -2.77 | -1.66 | -1.32 | 2.06 | -2.34 | -1.43 | -4.59 | -2.33 | -1.59 | -1.91 | -1.48 | -2.8 | -1.02 | -1.49 | -4.27 | -5.52 | -4.53 | -3.61 | -3.66 | -3.59 | -1.78 | -2.32 | -6.13 | -2.53 | -1.9 | -1.15 | -2.14 | -0.82 | -1.8 | -4.28 | -3.22 | -2.19 | 4.71 | -5.85 | -3.16 | -2.06 | -3.0 | -0.15 | -1.38 |
AAL22381 (rtcB) | -1.97 | -0.61 | 0.33 | 3.27 | -0.55 | -0.08 | -1.45 | -1.16 | 0.15 | -0.33 | 0.25 | -2.01 | 0.58 | -1.44 | -0.59 | -2.98 | -2.0 | -0.55 | -0.16 | -0.29 | -1.02 | -1.26 | -2.64 | -2.27 | -0.46 | -0.04 | -1.84 | 1.0 | -1.42 | -4.04 | -2.32 | -0.41 | 1.32 | -3.23 | -0.27 | -1.4 | -2.53 | 2.1 | 0.26 |
AAL22382 (STM3521) | -4.22 | -2.99 | -1.17 | 1.27 | -1.8 | -1.48 | -6.23 | -2.85 | -1.8 | -2.48 | -1.32 | -5.32 | -1.03 | -3.91 | -6.35 | -7.69 | -4.83 | -4.21 | -3.32 | -3.82 | -2.27 | -3.45 | -6.94 | -5.65 | -1.83 | -1.42 | -4.36 | -0.54 | -2.83 | -5.4 | -5.49 | -2.03 | 4.88 | -8.13 | -2.59 | -4.85 | -5.37 | 0.28 | -1.72 |
AAL22795 (uvrD) | 0.19 | 0.24 | -0.45 | 0.27 | -0.47 | -1.25 | 0.05 | 0.39 | 0.27 | -0.61 | 0.36 | 0.12 | -0.32 | 0.78 | 0.81 | -1.8 | 0.26 | 0.25 | 0.55 | 0.49 | -1.67 | -0.3 | -1.92 | -0.12 | -1.4 | -0.31 | -0.48 | 0.28 | 1.03 | -2.78 | -0.59 | -0.21 | 0.82 | -2.1 | 0.97 | -0.49 | 0.31 | -0.2 | 0.37 |
AAL22871 (STM4032) | -0.58 | 0.74 | -0.13 | 0.15 | -0.18 | -0.42 | -1.36 | 0.06 | 0.18 | -0.34 | 0.84 | -0.98 | -0.33 | 0.44 | 0.29 | -2.03 | 0.12 | -0.95 | -1.15 | -0.67 | -2.52 | 0.13 | -2.45 | 0.5 | -0.97 | -0.07 | -1.97 | 0.13 | 1.62 | -2.52 | -1.79 | -0.28 | 1.32 | -2.5 | 1.17 | -1.89 | 1.8 | 0.44 | -0.03 |
AAL23061 (lexA) | 0.38 | 0.64 | -0.1 | 0.47 | -0.13 | -3.1 | -1.73 | -0.27 | 0.04 | -0.51 | -0.2 | -0.5 | -0.03 | 0.08 | -0.55 | -1.12 | -1.15 | -0.75 | -0.66 | -0.53 | -1.79 | 0.11 | -0.74 | -0.87 | -0.97 | -1.1 | 0.07 | 0.38 | 2.08 | -2.86 | -1.12 | 0.34 | 2.33 | -0.96 | -0.82 | 0.28 | -0.21 | 0.63 | 0.18 |
AAL23062 (dinF) | 1.2 | 0.22 | -1.09 | -0.01 | -0.45 | -4.3 | -0.86 | -0.4 | 0.49 | -1.84 | 0.88 | -0.36 | -0.13 | 0.1 | 0.11 | -1.65 | -0.33 | -0.35 | -0.32 | -0.12 | -2.55 | -1.05 | -1.74 | 0.75 | -1.61 | -1.05 | -0.73 | -0.0 | 1.43 | -3.61 | -1.85 | 0.08 | 1.93 | -1.92 | 1.13 | -1.17 | 1.71 | -0.62 | 0.25 |
AAL23078 (uvrA) | 0.55 | 0.55 | -0.6 | 0.29 | -0.33 | -0.93 | -0.46 | 0.26 | 0.45 | -0.52 | 0.31 | 0.45 | -0.14 | 0.5 | -0.42 | -1.76 | -1.83 | -0.56 | -0.01 | -0.29 | -1.61 | -0.31 | -1.37 | -0.24 | -1.48 | 0.43 | 0.33 | 0.28 | 1.66 | -2.71 | -0.49 | -0.14 | 1.76 | -1.79 | -1.14 | -0.1 | 0.42 | 0.07 | 0.27 |
AAL23202 (yjfR) | -0.63 | 0.93 | -0.68 | -1.09 | -1.48 | -1.0 | -0.65 | -0.43 | 0.35 | -0.53 | 1.14 | -0.77 | -0.91 | -0.84 | -0.09 | -1.11 | -1.11 | -1.48 | -1.38 | -1.04 | -1.81 | -0.05 | -0.31 | 1.86 | -0.99 | -0.93 | 0.13 | 0.29 | -1.15 | -1.21 | -1.15 | -0.78 | -1.23 | -0.74 | 0.06 | -0.1 | 3.22 | -1.48 | -0.76 |
AAL23271 (nrdG) | -0.61 | 0.41 | -0.98 | 0.14 | -0.96 | -2.71 | -0.6 | 0.34 | 0.18 | -0.55 | 0.7 | 1.1 | -0.47 | -0.14 | 1.98 | -1.2 | -0.68 | 0.41 | 0.95 | 0.82 | -1.64 | -0.69 | -0.26 | 0.06 | -1.9 | -1.41 | -0.78 | 0.4 | 0.9 | -3.4 | -1.43 | -0.8 | 0.99 | -1.02 | 0.37 | -1.04 | 0.89 | -1.2 | -0.41 |
AAL23360 (yjjA) | 0.27 | 0.06 | 0.68 | -0.0 | -0.05 | -0.55 | -0.83 | 0.33 | 0.07 | -0.43 | 0.36 | -0.11 | 0.56 | 0.45 | -0.36 | -0.93 | -1.31 | -0.78 | -0.6 | -0.54 | 0.06 | -1.4 | -1.29 | 0.31 | -0.51 | -0.42 | 0.3 | 0.24 | 1.19 | -3.18 | -0.75 | 0.39 | 1.39 | -1.34 | -1.12 | -0.05 | 0.8 | 0.31 | 0.64 |
AAL23361 (dnaC) | 0.15 | 0.04 | -0.24 | 0.4 | -0.58 | -1.53 | -0.17 | 0.15 | -0.15 | -0.48 | 0.18 | -0.26 | 0.16 | 0.25 | 1.33 | -0.64 | -0.7 | 0.2 | 0.51 | 0.56 | -0.91 | -0.93 | -0.75 | -0.16 | -0.81 | -0.36 | -0.36 | 0.08 | 1.31 | -3.57 | -0.56 | -0.15 | 1.36 | -0.77 | -0.13 | -0.65 | 0.31 | -0.23 | 0.36 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.