Coexpression cluster: Cluster_12 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016491 oxidoreductase activity 20.75% (11/53) 2.05 3.5e-05 0.004916
GO:0055076 transition metal ion homeostasis 3.77% (2/53) 4.95 0.001032 0.012035
GO:0055072 iron ion homeostasis 3.77% (2/53) 4.95 0.001032 0.012035
GO:0046916 cellular transition metal ion homeostasis 3.77% (2/53) 4.95 0.001032 0.012035
GO:0030003 cellular cation homeostasis 3.77% (2/53) 4.95 0.001032 0.012035
GO:0055082 cellular chemical homeostasis 3.77% (2/53) 4.95 0.001032 0.012035
GO:0019725 cellular homeostasis 3.77% (2/53) 4.95 0.001032 0.012035
GO:0006879 cellular iron ion homeostasis 3.77% (2/53) 4.95 0.001032 0.012035
GO:0006875 cellular metal ion homeostasis 3.77% (2/53) 4.95 0.001032 0.012035
GO:0006873 cellular ion homeostasis 3.77% (2/53) 4.95 0.001032 0.012035
GO:0055065 metal ion homeostasis 3.77% (2/53) 4.95 0.001032 0.012035
GO:0009055 electron transfer activity 9.43% (5/53) 3.02 0.000244 0.017054
GO:0050801 ion homeostasis 3.77% (2/53) 3.95 0.005935 0.046159
GO:0000105 histidine biosynthetic process 3.77% (2/53) 3.95 0.005935 0.046159
GO:0006547 histidine metabolic process 3.77% (2/53) 3.95 0.005935 0.046159
GO:0048878 chemical homeostasis 3.77% (2/53) 3.95 0.005935 0.046159
GO:0055080 cation homeostasis 3.77% (2/53) 3.95 0.005935 0.046159
GO:0098771 inorganic ion homeostasis 3.77% (2/53) 3.95 0.005935 0.046159
GO:0005840 ribosome 9.43% (5/53) 2.02 0.006578 0.04847
GO:0043232 intracellular non-membrane-bounded organelle 9.43% (5/53) 1.98 0.007362 0.04908
GO:0043229 intracellular organelle 9.43% (5/53) 1.98 0.007362 0.04908
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Clostridioides difficile HCCA Cluster_14 0.033 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_12 0.034 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_15 0.032 OrthoFinder Compare
Escherichia coli HCCA Cluster_24 0.031 OrthoFinder Compare
Escherichia coli HCCA Cluster_31 0.045 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_3 0.031 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_13 0.029 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_10 0.052 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_17 0.029 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_18 0.033 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_22 0.04 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_55 0.03 OrthoFinder Compare
Salmonella enterica HCCA Cluster_15 0.041 OrthoFinder Compare
Salmonella enterica HCCA Cluster_23 0.04 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_3 0.047 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_8 0.044 OrthoFinder Compare
Sequences (53) (download table)

InterPro Domains

GO Terms

Family Terms