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(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | BHI | Basal Medium | CD196,BHI | CD196,Basal Medium | CD196,Log,BHI | ClnR mutant | LB-CD16 | Log,BHI | LuxS KO | ND-CD12 | ND-CD13 | ND-CD17 | R20291 | R20291,BHI | R20291,Basal Medium | R20291,Heme+ | R20291,Log | R20291,Log,BHI | Strain 630 | Strain 630,BHI | Strain 630,Basal Medium | Strain 630,Faecal water+ | Strain 630,HPUra+ | Strain 630,Lag | Strain 630,Log | Strain 630,Log,BHI | Strain 630,Sporulating | TW11 | UK1 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CCL17047 (glgC) | -1.6 | -0.1 | -1.42 | -0.58 | -2.59 | -1.81 | 2.38 | -3.08 | 1.08 | 1.68 | -0.09 | 1.32 | -0.01 | -3.44 | -1.04 | -0.93 | -0.42 | -3.31 | 0.06 | -1.52 | 0.17 | 0.24 | 0.2 | -0.23 | -1.7 | -3.06 | 1.21 | -2.1 | -0.84 |
CCL17048 (glgD) | -2.17 | -1.52 | -1.45 | -0.67 | -2.51 | -2.08 | 2.72 | -4.49 | 0.71 | 1.88 | 0.17 | 1.61 | 0.36 | -3.26 | -1.91 | -1.2 | -0.42 | -3.91 | 0.09 | -1.63 | 0.22 | -0.95 | 0.24 | -0.45 | -1.88 | -3.74 | 0.75 | -1.88 | -0.48 |
CCL17049 (glgA) | -2.11 | -0.9 | -1.58 | -0.84 | -2.7 | -1.75 | 2.5 | -3.47 | 1.0 | 1.83 | 0.16 | 1.53 | 0.4 | -3.49 | -1.61 | -0.4 | -0.54 | -3.58 | 0.11 | -2.03 | -0.25 | -0.57 | 0.58 | 0.21 | -1.15 | -3.42 | 0.43 | -2.26 | -0.47 |
CCL17050 (glgP) | -1.51 | -0.27 | -0.84 | 0.06 | -1.7 | -2.05 | 2.38 | -2.72 | 0.87 | 1.64 | -0.11 | 1.33 | 0.17 | -2.71 | -0.96 | -0.77 | -0.62 | -2.78 | 0.17 | -1.53 | 0.18 | -0.2 | 0.8 | 0.04 | -1.38 | -3.01 | 0.15 | -1.73 | -0.77 |
CCL17051 (BN171_1130005) | -1.41 | -0.27 | -1.03 | -0.35 | -1.99 | -1.61 | 2.48 | -2.63 | -0.05 | 1.81 | 0.08 | 1.61 | -0.02 | -2.69 | -1.43 | -0.39 | -0.6 | -2.94 | 0.03 | -1.77 | -0.29 | 0.26 | 0.97 | -0.13 | -1.09 | -3.0 | -0.39 | -1.47 | -0.62 |
CCL17078 (leuC) | -2.38 | -2.49 | -2.3 | -2.08 | -1.69 | -0.43 | 2.99 | -2.3 | -4.2 | 2.31 | -1.04 | 1.73 | -0.98 | -4.54 | -2.69 | -0.18 | -0.13 | -2.97 | -0.9 | -2.49 | -4.29 | 0.12 | -0.82 | -1.93 | -2.1 | -2.67 | 1.75 | -0.21 | -1.93 |
CCL17079 (leuD) | -1.75 | -3.21 | -1.62 | -1.66 | -1.57 | -0.73 | 3.0 | -2.03 | -4.35 | 2.91 | -0.65 | 1.3 | -0.95 | -4.27 | -2.47 | -0.04 | -1.05 | -3.02 | -1.1 | -1.42 | -3.07 | -0.33 | -0.66 | -1.72 | -2.0 | -2.41 | 0.79 | -0.34 | -3.23 |
CCL17080 (leuB) | -0.59 | -1.89 | -0.65 | -0.23 | -0.54 | -0.54 | 2.34 | -1.03 | -2.45 | 2.29 | -1.19 | 1.54 | -0.31 | -1.51 | -1.72 | 0.32 | -1.2 | -1.6 | -0.61 | -0.2 | -0.93 | -0.13 | -0.15 | -1.7 | -1.88 | -1.0 | 0.64 | -0.01 | -1.91 |
CCL17655 (cwp) | -0.21 | -1.02 | -0.35 | -1.63 | -0.87 | -0.61 | 0.95 | -1.57 | -1.44 | 1.21 | 0.95 | 1.09 | -0.04 | -2.14 | -2.98 | 0.66 | -0.64 | -1.97 | 0.5 | 0.17 | -0.74 | -0.62 | 0.78 | 0.47 | 0.2 | -1.25 | 0.85 | -0.18 | 0.46 |
CCL17765 (BN171_1780001) | -2.38 | -5.4 | -3.84 | -2.11 | -2.0 | -2.63 | 1.7 | -5.59 | -0.77 | 1.12 | -1.77 | 3.02 | -1.08 | -5.35 | -4.04 | -0.73 | -0.81 | -3.67 | -0.19 | -1.62 | -2.74 | - | 0.81 | 0.43 | -0.22 | -3.44 | 2.48 | -1.29 | -1.24 |
CCL17785 (hisD) | -0.25 | -0.13 | -0.14 | 0.02 | -0.33 | -0.8 | 1.12 | -0.49 | -1.91 | 1.57 | 0.69 | -0.6 | 0.16 | -0.85 | -1.02 | 0.87 | -0.15 | -0.2 | -0.37 | -0.16 | -1.23 | -0.17 | -0.29 | -0.66 | -0.04 | -0.84 | 0.69 | 0.12 | 0.18 |
CCL17849 (BN171_1840009) | -0.34 | 0.05 | -0.63 | -0.09 | -1.2 | -0.56 | 1.67 | -2.24 | -0.81 | 1.76 | 0.79 | -1.14 | 0.31 | -2.16 | -1.93 | 1.24 | -0.48 | -2.75 | 0.11 | -0.82 | 0.47 | -0.76 | -0.31 | 0.4 | 0.74 | -2.08 | -0.36 | -0.67 | -0.12 |
CCL17850 (BN171_1840010) | -1.11 | -0.8 | -1.09 | -0.94 | -1.86 | -0.14 | 2.01 | -2.8 | -1.48 | 2.09 | 1.08 | -0.64 | 0.07 | -2.56 | -2.84 | 1.21 | -0.34 | -3.3 | 0.05 | -1.06 | 0.24 | -1.38 | -0.39 | 0.43 | 0.67 | -2.56 | -0.49 | -0.57 | 0.44 |
CCL18225 (BN171_2170012) | -1.42 | -0.81 | -1.04 | -0.76 | -1.4 | 0.27 | 1.3 | -2.64 | -0.77 | 1.66 | 1.48 | 1.41 | -0.25 | -2.37 | -1.96 | -0.3 | -1.24 | -2.38 | 0.05 | -0.44 | 0.35 | -3.0 | 0.24 | 0.79 | 0.08 | -1.31 | -0.21 | -0.46 | 0.79 |
CCL18226 (BN171_2170013) | -1.59 | -1.09 | -1.25 | -1.06 | -2.14 | -0.26 | 1.41 | -2.87 | -0.01 | 1.92 | 1.3 | 1.0 | 0.08 | -1.85 | -2.05 | 0.11 | -0.57 | -2.72 | 0.09 | -1.02 | 0.05 | -1.39 | 0.35 | 0.93 | 0.09 | -2.07 | 0.51 | -0.33 | 0.03 |
CCL18360 (BN171_2230010) | -2.36 | -1.61 | -2.05 | -0.72 | -2.04 | -1.33 | 1.42 | -2.66 | -0.82 | 1.18 | 0.59 | 0.99 | 0.32 | -2.73 | -1.42 | 1.04 | -0.44 | -2.33 | -0.48 | -1.05 | 0.23 | -0.07 | -0.4 | 0.41 | 0.71 | -2.27 | 1.91 | 0.03 | 0.06 |
CCL18361 (BN171_2240001) | -2.58 | -2.79 | -1.94 | -1.82 | -2.56 | -1.44 | 1.8 | -3.86 | -1.85 | 1.88 | 1.16 | 1.43 | 0.54 | -3.02 | -2.95 | 1.21 | -0.65 | -3.28 | -0.4 | -0.34 | -0.46 | -3.05 | -0.16 | -0.05 | 0.32 | -1.9 | 1.1 | -0.11 | 0.65 |
CCL18478 (thrC) | -1.39 | -3.35 | -1.23 | -2.0 | -1.0 | -0.66 | 0.94 | -2.39 | -3.59 | 1.66 | 1.38 | 0.49 | 1.37 | -1.49 | -2.59 | 1.67 | -0.84 | -1.17 | -1.12 | -1.98 | -3.18 | -2.51 | -0.52 | -0.3 | -0.27 | -3.09 | 1.76 | -0.25 | 1.24 |
CCL18479 (thrB) | -0.81 | -3.31 | -0.84 | -1.32 | -0.95 | -0.09 | 0.42 | -1.81 | -3.41 | 0.9 | 0.84 | -0.18 | 1.22 | -1.09 | -2.52 | 1.69 | -0.48 | -0.92 | -0.88 | -0.74 | -1.97 | -2.52 | -0.36 | 0.64 | 0.55 | -1.71 | 2.0 | 0.22 | 0.46 |
CCL18539 (BN171_2420006) | -0.16 | -1.3 | -0.12 | -1.16 | -0.22 | -0.34 | 0.53 | -0.65 | -1.05 | 0.51 | 0.61 | 0.26 | -0.09 | -0.87 | -0.93 | 0.49 | 0.03 | 0.07 | 0.62 | 0.18 | -1.25 | -0.07 | 0.84 | -0.84 | 0.09 | -0.09 | 0.25 | 0.67 | 0.38 |
CCL18540 (BN171_2420007) | -1.52 | -3.3 | -1.23 | -2.19 | -1.42 | -0.39 | 0.76 | -2.86 | -1.04 | 1.15 | 1.24 | 0.97 | 0.6 | -1.6 | -2.34 | 1.02 | -0.43 | -1.37 | 0.51 | -0.4 | -1.7 | -1.03 | 0.73 | -0.48 | 0.36 | -1.14 | 0.56 | 0.85 | 1.24 |
CCL18541 (bioB) | -0.68 | -1.99 | -0.74 | -1.45 | -0.79 | -0.23 | 0.62 | -1.59 | -1.2 | 1.16 | 1.14 | 0.83 | 0.38 | -1.12 | -1.32 | 0.9 | -0.41 | -0.45 | 0.45 | -0.16 | -1.52 | -0.8 | 0.5 | -0.63 | 0.19 | -0.82 | 0.51 | 0.42 | 0.97 |
CCL18542 (thiH) | -0.98 | -0.49 | -0.74 | -0.6 | -0.57 | -0.64 | 1.08 | -0.97 | -1.73 | 1.23 | 1.31 | 0.99 | -0.2 | -0.98 | -0.14 | -0.05 | -0.94 | -0.05 | -0.1 | -0.03 | -0.95 | -0.86 | -1.78 | -1.99 | -0.92 | -0.58 | 0.94 | 0.67 | 1.32 |
CCL18544 (gabT) | -3.08 | 0.34 | -3.42 | -0.85 | -3.8 | -2.7 | 3.58 | -4.17 | 0.65 | 1.81 | -2.1 | -2.65 | -1.81 | -3.87 | -1.82 | -2.55 | 0.52 | -4.04 | -1.83 | -2.44 | 0.35 | -2.24 | -3.28 | -0.58 | -2.19 | -3.87 | 1.92 | -3.19 | -3.2 |
CCL18551 (ldh) | 0.11 | 0.56 | -0.36 | 0.52 | -0.83 | -2.77 | 1.81 | -1.31 | 0.21 | 1.76 | 1.13 | 0.3 | 0.11 | -2.12 | -1.59 | 0.96 | -0.38 | -2.32 | -0.76 | -1.65 | -1.4 | -2.25 | -0.07 | -0.42 | -0.49 | -3.17 | 0.82 | -1.45 | -0.07 |
CCL18945 (leuS) | -0.09 | -1.85 | -0.83 | -2.18 | -0.48 | 0.11 | 1.13 | -0.72 | -4.65 | 1.25 | 0.85 | 0.48 | 0.61 | -0.43 | -2.36 | 1.27 | 0.0 | 0.04 | -0.7 | -0.28 | -2.28 | 0.42 | -0.54 | -0.9 | 0.27 | -0.65 | 0.91 | -0.38 | 0.25 |
CCL19167 (brnQ) | -1.23 | -1.18 | -1.77 | -0.52 | -1.71 | -2.7 | 3.25 | -2.68 | -2.17 | 1.53 | 0.09 | 0.15 | -0.24 | -2.39 | -1.71 | -0.12 | -0.09 | -1.88 | -1.04 | -2.24 | -0.92 | -0.36 | -0.79 | -0.78 | 0.08 | -2.65 | 1.26 | -0.49 | -0.4 |
CCL19203 (cwp) | 0.28 | -0.06 | 0.07 | -1.08 | -0.57 | -0.67 | 0.87 | -0.71 | -0.02 | 1.07 | 0.57 | 0.55 | 0.52 | -0.51 | -0.7 | 0.84 | -0.57 | -0.38 | -0.59 | -0.11 | -1.09 | -0.57 | -0.06 | 0.2 | -0.78 | -1.44 | 0.53 | 0.31 | 0.11 |
CCL19259 (cwp) | 0.41 | -0.76 | 0.21 | -0.9 | -0.44 | -0.21 | -0.55 | -0.45 | -3.37 | -0.19 | -0.21 | -0.12 | 0.15 | -0.26 | -0.94 | 1.18 | -0.86 | 0.05 | 0.25 | 0.81 | -0.75 | 0.47 | 0.78 | 0.24 | 0.68 | -0.23 | 0.42 | -0.05 | -0.48 |
CCL19386 (atpD) | -4.36 | -0.86 | -4.73 | -0.93 | -5.1 | -5.08 | 3.3 | -5.71 | -5.98 | 2.45 | -0.26 | 1.1 | -2.42 | -5.16 | -2.83 | -2.24 | -3.07 | -4.44 | -0.98 | -3.1 | -0.5 | -1.62 | -1.94 | -3.75 | -1.61 | -3.57 | 2.56 | -2.49 | -2.08 |
CCL19387 (atpB) | -3.63 | -0.14 | -3.98 | -0.08 | -3.67 | -5.11 | 3.29 | -4.64 | -6.16 | 2.44 | -0.36 | 1.14 | -2.61 | -4.43 | -1.76 | -2.59 | -3.46 | -3.35 | -0.94 | -2.43 | -0.06 | -0.69 | -1.92 | -4.56 | -2.05 | -2.41 | 2.11 | -2.44 | -2.08 |
CCL19388 (atpA) | -3.77 | -0.11 | -3.86 | -0.05 | -3.5 | -4.12 | 3.31 | -4.59 | -6.19 | 2.69 | -0.16 | 1.16 | -2.81 | -4.44 | -1.74 | -2.61 | -3.62 | -3.23 | -0.96 | -2.53 | -0.3 | -0.87 | -2.06 | -4.86 | -2.3 | -2.44 | 1.74 | -2.64 | -1.99 |
CCL19389 (atpF) | -5.31 | -1.37 | -5.04 | -1.63 | -5.42 | -4.02 | 3.3 | -6.34 | -5.77 | 2.95 | -0.3 | 1.15 | -2.45 | -5.67 | -3.17 | -2.49 | -3.17 | -5.03 | -0.57 | -4.59 | -1.56 | -0.86 | -1.82 | -4.63 | -2.09 | -4.21 | 2.08 | -1.7 | -2.82 |
CCL19390 (atpC) | -5.76 | -3.15 | -5.36 | -1.33 | -5.29 | -4.08 | 3.38 | -7.86 | -6.49 | 2.93 | 0.11 | 1.41 | -2.73 | -5.58 | -3.78 | -2.66 | -3.25 | -5.69 | -0.76 | -3.78 | -0.93 | -3.67 | -2.01 | -4.65 | -2.09 | -4.18 | 1.9 | -2.53 | -1.68 |
CCL19391 (atpE) | -5.19 | -1.37 | -5.12 | -1.21 | -5.26 | -3.6 | 3.6 | -6.09 | -6.64 | 2.76 | 0.15 | 1.35 | -3.24 | -5.22 | -2.84 | -3.29 | -3.34 | -4.63 | -1.08 | -3.65 | -1.15 | -2.57 | -2.25 | -4.97 | -2.72 | -3.59 | 1.45 | -2.86 | -1.49 |
CCL19392 (atpK) | -4.01 | -0.32 | -4.36 | -0.42 | -4.19 | -3.28 | 3.27 | -4.97 | -5.74 | 2.68 | -0.18 | 1.14 | -2.65 | -4.98 | -1.8 | -2.66 | -3.04 | -3.66 | -1.02 | -2.8 | -0.55 | -0.98 | -2.34 | -4.43 | -2.24 | -2.96 | 2.13 | -2.59 | -2.41 |
CCL19393 (atpI) | -3.58 | -0.09 | -3.28 | -0.0 | -3.31 | -3.24 | 3.25 | -4.44 | -3.32 | 2.62 | 0.14 | 1.15 | -2.32 | -3.57 | -1.32 | -2.32 | -2.69 | -3.11 | -0.46 | -2.25 | -0.15 | -1.48 | -1.55 | -3.71 | -2.22 | -2.42 | 1.5 | -2.42 | -1.59 |
CCL19394 (BN171_3090013) | -1.83 | 0.93 | -1.8 | 0.37 | -1.99 | -1.82 | 2.79 | -1.88 | -1.09 | 2.09 | -0.31 | 0.57 | -2.17 | -2.6 | -0.35 | -1.82 | -1.72 | -1.55 | -0.31 | -1.19 | 0.09 | -0.2 | -1.26 | -2.76 | -1.79 | -1.52 | 1.81 | -2.02 | -1.96 |
CCL19627 (rnr) | 0.55 | 0.18 | 0.26 | 0.08 | -0.08 | -0.35 | 0.41 | -0.0 | -0.48 | 0.4 | 0.21 | 0.01 | 0.3 | -0.05 | -0.33 | 0.58 | -0.35 | -0.43 | -0.17 | 0.12 | -0.59 | -0.47 | -0.14 | -1.07 | -0.13 | -0.45 | 0.75 | -0.17 | -0.12 |
CCL19890 (BN171_3590011) | -2.32 | -4.58 | -1.82 | -2.64 | -1.99 | -0.36 | 1.49 | -4.18 | -1.33 | 0.62 | 0.57 | 0.54 | 1.53 | -2.2 | -3.3 | 1.87 | -0.55 | -2.66 | 0.09 | -0.69 | -1.27 | -1.7 | -0.34 | 0.5 | 0.81 | -2.62 | 1.05 | 0.87 | 0.49 |
CCL19926 (BN171_3600004) | -3.03 | 0.42 | -3.23 | -0.41 | -3.28 | -2.16 | 2.4 | -4.05 | -1.09 | 2.73 | 0.59 | -0.61 | -0.63 | -3.8 | -0.93 | -1.85 | -0.52 | -3.44 | 0.24 | -2.44 | 1.22 | 0.37 | -1.42 | -1.1 | -1.57 | -3.3 | 1.23 | -1.16 | -1.42 |
CCL20455 (fusA) | -2.33 | 0.32 | -1.3 | 0.18 | -3.45 | -4.26 | 2.69 | -4.36 | 0.69 | 1.72 | -0.17 | 0.27 | -0.53 | -4.07 | -1.01 | -2.81 | -0.98 | -4.26 | -0.94 | -1.65 | 1.1 | 1.72 | -3.28 | -0.63 | -3.46 | -4.31 | 1.55 | -3.66 | -2.04 |
CCL20476 (BN171_540001) | -1.13 | -0.73 | -1.39 | -0.72 | -1.37 | -1.83 | 3.04 | -1.57 | -2.02 | 2.6 | 0.24 | -0.21 | -1.08 | -1.89 | -1.92 | -0.13 | -0.3 | -1.41 | 0.25 | -1.5 | -1.53 | -1.81 | -0.27 | -2.29 | -0.68 | -1.79 | 0.15 | -0.7 | -1.37 |
CCL20702 (BN171_950003) | -0.85 | -0.31 | -0.23 | -0.1 | -0.59 | 0.29 | 0.32 | -0.47 | -0.51 | 0.32 | -0.15 | 0.02 | 0.34 | -1.4 | -0.76 | 0.0 | -1.36 | -1.09 | 0.39 | 0.03 | -0.37 | 1.86 | 0.23 | 0.6 | 0.05 | -0.06 | 0.14 | -0.68 | -0.15 |
CCL20703 (BN171_950004) | -1.09 | -0.63 | -0.06 | -0.17 | -0.31 | 0.56 | 0.64 | -0.68 | -0.85 | 0.6 | 0.1 | 0.31 | 0.27 | -1.84 | -0.98 | 0.35 | -1.25 | -1.19 | 0.56 | -0.32 | -0.4 | 0.94 | 0.59 | 0.84 | 0.35 | -0.42 | 0.53 | -0.82 | -0.33 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.