Heatmap: Cluster_20 (HCCA)

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(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL17047 (glgC)
-1.6 -0.1 -1.42 -0.58 -2.59 -1.81 2.38 -3.08 1.08 1.68 -0.09 1.32 -0.01 -3.44 -1.04 -0.93 -0.42 -3.31 0.06 -1.52 0.17 0.24 0.2 -0.23 -1.7 -3.06 1.21 -2.1 -0.84
CCL17048 (glgD)
-2.17 -1.52 -1.45 -0.67 -2.51 -2.08 2.72 -4.49 0.71 1.88 0.17 1.61 0.36 -3.26 -1.91 -1.2 -0.42 -3.91 0.09 -1.63 0.22 -0.95 0.24 -0.45 -1.88 -3.74 0.75 -1.88 -0.48
CCL17049 (glgA)
-2.11 -0.9 -1.58 -0.84 -2.7 -1.75 2.5 -3.47 1.0 1.83 0.16 1.53 0.4 -3.49 -1.61 -0.4 -0.54 -3.58 0.11 -2.03 -0.25 -0.57 0.58 0.21 -1.15 -3.42 0.43 -2.26 -0.47
CCL17050 (glgP)
-1.51 -0.27 -0.84 0.06 -1.7 -2.05 2.38 -2.72 0.87 1.64 -0.11 1.33 0.17 -2.71 -0.96 -0.77 -0.62 -2.78 0.17 -1.53 0.18 -0.2 0.8 0.04 -1.38 -3.01 0.15 -1.73 -0.77
CCL17051 (BN171_1130005)
-1.41 -0.27 -1.03 -0.35 -1.99 -1.61 2.48 -2.63 -0.05 1.81 0.08 1.61 -0.02 -2.69 -1.43 -0.39 -0.6 -2.94 0.03 -1.77 -0.29 0.26 0.97 -0.13 -1.09 -3.0 -0.39 -1.47 -0.62
CCL17078 (leuC)
-2.38 -2.49 -2.3 -2.08 -1.69 -0.43 2.99 -2.3 -4.2 2.31 -1.04 1.73 -0.98 -4.54 -2.69 -0.18 -0.13 -2.97 -0.9 -2.49 -4.29 0.12 -0.82 -1.93 -2.1 -2.67 1.75 -0.21 -1.93
CCL17079 (leuD)
-1.75 -3.21 -1.62 -1.66 -1.57 -0.73 3.0 -2.03 -4.35 2.91 -0.65 1.3 -0.95 -4.27 -2.47 -0.04 -1.05 -3.02 -1.1 -1.42 -3.07 -0.33 -0.66 -1.72 -2.0 -2.41 0.79 -0.34 -3.23
CCL17080 (leuB)
-0.59 -1.89 -0.65 -0.23 -0.54 -0.54 2.34 -1.03 -2.45 2.29 -1.19 1.54 -0.31 -1.51 -1.72 0.32 -1.2 -1.6 -0.61 -0.2 -0.93 -0.13 -0.15 -1.7 -1.88 -1.0 0.64 -0.01 -1.91
CCL17655 (cwp)
-0.21 -1.02 -0.35 -1.63 -0.87 -0.61 0.95 -1.57 -1.44 1.21 0.95 1.09 -0.04 -2.14 -2.98 0.66 -0.64 -1.97 0.5 0.17 -0.74 -0.62 0.78 0.47 0.2 -1.25 0.85 -0.18 0.46
CCL17765 (BN171_1780001)
-2.38 -5.4 -3.84 -2.11 -2.0 -2.63 1.7 -5.59 -0.77 1.12 -1.77 3.02 -1.08 -5.35 -4.04 -0.73 -0.81 -3.67 -0.19 -1.62 -2.74 - 0.81 0.43 -0.22 -3.44 2.48 -1.29 -1.24
CCL17785 (hisD)
-0.25 -0.13 -0.14 0.02 -0.33 -0.8 1.12 -0.49 -1.91 1.57 0.69 -0.6 0.16 -0.85 -1.02 0.87 -0.15 -0.2 -0.37 -0.16 -1.23 -0.17 -0.29 -0.66 -0.04 -0.84 0.69 0.12 0.18
CCL17849 (BN171_1840009)
-0.34 0.05 -0.63 -0.09 -1.2 -0.56 1.67 -2.24 -0.81 1.76 0.79 -1.14 0.31 -2.16 -1.93 1.24 -0.48 -2.75 0.11 -0.82 0.47 -0.76 -0.31 0.4 0.74 -2.08 -0.36 -0.67 -0.12
CCL17850 (BN171_1840010)
-1.11 -0.8 -1.09 -0.94 -1.86 -0.14 2.01 -2.8 -1.48 2.09 1.08 -0.64 0.07 -2.56 -2.84 1.21 -0.34 -3.3 0.05 -1.06 0.24 -1.38 -0.39 0.43 0.67 -2.56 -0.49 -0.57 0.44
CCL18225 (BN171_2170012)
-1.42 -0.81 -1.04 -0.76 -1.4 0.27 1.3 -2.64 -0.77 1.66 1.48 1.41 -0.25 -2.37 -1.96 -0.3 -1.24 -2.38 0.05 -0.44 0.35 -3.0 0.24 0.79 0.08 -1.31 -0.21 -0.46 0.79
CCL18226 (BN171_2170013)
-1.59 -1.09 -1.25 -1.06 -2.14 -0.26 1.41 -2.87 -0.01 1.92 1.3 1.0 0.08 -1.85 -2.05 0.11 -0.57 -2.72 0.09 -1.02 0.05 -1.39 0.35 0.93 0.09 -2.07 0.51 -0.33 0.03
CCL18360 (BN171_2230010)
-2.36 -1.61 -2.05 -0.72 -2.04 -1.33 1.42 -2.66 -0.82 1.18 0.59 0.99 0.32 -2.73 -1.42 1.04 -0.44 -2.33 -0.48 -1.05 0.23 -0.07 -0.4 0.41 0.71 -2.27 1.91 0.03 0.06
CCL18361 (BN171_2240001)
-2.58 -2.79 -1.94 -1.82 -2.56 -1.44 1.8 -3.86 -1.85 1.88 1.16 1.43 0.54 -3.02 -2.95 1.21 -0.65 -3.28 -0.4 -0.34 -0.46 -3.05 -0.16 -0.05 0.32 -1.9 1.1 -0.11 0.65
CCL18478 (thrC)
-1.39 -3.35 -1.23 -2.0 -1.0 -0.66 0.94 -2.39 -3.59 1.66 1.38 0.49 1.37 -1.49 -2.59 1.67 -0.84 -1.17 -1.12 -1.98 -3.18 -2.51 -0.52 -0.3 -0.27 -3.09 1.76 -0.25 1.24
CCL18479 (thrB)
-0.81 -3.31 -0.84 -1.32 -0.95 -0.09 0.42 -1.81 -3.41 0.9 0.84 -0.18 1.22 -1.09 -2.52 1.69 -0.48 -0.92 -0.88 -0.74 -1.97 -2.52 -0.36 0.64 0.55 -1.71 2.0 0.22 0.46
CCL18539 (BN171_2420006)
-0.16 -1.3 -0.12 -1.16 -0.22 -0.34 0.53 -0.65 -1.05 0.51 0.61 0.26 -0.09 -0.87 -0.93 0.49 0.03 0.07 0.62 0.18 -1.25 -0.07 0.84 -0.84 0.09 -0.09 0.25 0.67 0.38
CCL18540 (BN171_2420007)
-1.52 -3.3 -1.23 -2.19 -1.42 -0.39 0.76 -2.86 -1.04 1.15 1.24 0.97 0.6 -1.6 -2.34 1.02 -0.43 -1.37 0.51 -0.4 -1.7 -1.03 0.73 -0.48 0.36 -1.14 0.56 0.85 1.24
CCL18541 (bioB)
-0.68 -1.99 -0.74 -1.45 -0.79 -0.23 0.62 -1.59 -1.2 1.16 1.14 0.83 0.38 -1.12 -1.32 0.9 -0.41 -0.45 0.45 -0.16 -1.52 -0.8 0.5 -0.63 0.19 -0.82 0.51 0.42 0.97
CCL18542 (thiH)
-0.98 -0.49 -0.74 -0.6 -0.57 -0.64 1.08 -0.97 -1.73 1.23 1.31 0.99 -0.2 -0.98 -0.14 -0.05 -0.94 -0.05 -0.1 -0.03 -0.95 -0.86 -1.78 -1.99 -0.92 -0.58 0.94 0.67 1.32
CCL18544 (gabT)
-3.08 0.34 -3.42 -0.85 -3.8 -2.7 3.58 -4.17 0.65 1.81 -2.1 -2.65 -1.81 -3.87 -1.82 -2.55 0.52 -4.04 -1.83 -2.44 0.35 -2.24 -3.28 -0.58 -2.19 -3.87 1.92 -3.19 -3.2
CCL18551 (ldh)
0.11 0.56 -0.36 0.52 -0.83 -2.77 1.81 -1.31 0.21 1.76 1.13 0.3 0.11 -2.12 -1.59 0.96 -0.38 -2.32 -0.76 -1.65 -1.4 -2.25 -0.07 -0.42 -0.49 -3.17 0.82 -1.45 -0.07
CCL18945 (leuS)
-0.09 -1.85 -0.83 -2.18 -0.48 0.11 1.13 -0.72 -4.65 1.25 0.85 0.48 0.61 -0.43 -2.36 1.27 0.0 0.04 -0.7 -0.28 -2.28 0.42 -0.54 -0.9 0.27 -0.65 0.91 -0.38 0.25
CCL19167 (brnQ)
-1.23 -1.18 -1.77 -0.52 -1.71 -2.7 3.25 -2.68 -2.17 1.53 0.09 0.15 -0.24 -2.39 -1.71 -0.12 -0.09 -1.88 -1.04 -2.24 -0.92 -0.36 -0.79 -0.78 0.08 -2.65 1.26 -0.49 -0.4
CCL19203 (cwp)
0.28 -0.06 0.07 -1.08 -0.57 -0.67 0.87 -0.71 -0.02 1.07 0.57 0.55 0.52 -0.51 -0.7 0.84 -0.57 -0.38 -0.59 -0.11 -1.09 -0.57 -0.06 0.2 -0.78 -1.44 0.53 0.31 0.11
CCL19259 (cwp)
0.41 -0.76 0.21 -0.9 -0.44 -0.21 -0.55 -0.45 -3.37 -0.19 -0.21 -0.12 0.15 -0.26 -0.94 1.18 -0.86 0.05 0.25 0.81 -0.75 0.47 0.78 0.24 0.68 -0.23 0.42 -0.05 -0.48
CCL19386 (atpD)
-4.36 -0.86 -4.73 -0.93 -5.1 -5.08 3.3 -5.71 -5.98 2.45 -0.26 1.1 -2.42 -5.16 -2.83 -2.24 -3.07 -4.44 -0.98 -3.1 -0.5 -1.62 -1.94 -3.75 -1.61 -3.57 2.56 -2.49 -2.08
CCL19387 (atpB)
-3.63 -0.14 -3.98 -0.08 -3.67 -5.11 3.29 -4.64 -6.16 2.44 -0.36 1.14 -2.61 -4.43 -1.76 -2.59 -3.46 -3.35 -0.94 -2.43 -0.06 -0.69 -1.92 -4.56 -2.05 -2.41 2.11 -2.44 -2.08
CCL19388 (atpA)
-3.77 -0.11 -3.86 -0.05 -3.5 -4.12 3.31 -4.59 -6.19 2.69 -0.16 1.16 -2.81 -4.44 -1.74 -2.61 -3.62 -3.23 -0.96 -2.53 -0.3 -0.87 -2.06 -4.86 -2.3 -2.44 1.74 -2.64 -1.99
CCL19389 (atpF)
-5.31 -1.37 -5.04 -1.63 -5.42 -4.02 3.3 -6.34 -5.77 2.95 -0.3 1.15 -2.45 -5.67 -3.17 -2.49 -3.17 -5.03 -0.57 -4.59 -1.56 -0.86 -1.82 -4.63 -2.09 -4.21 2.08 -1.7 -2.82
CCL19390 (atpC)
-5.76 -3.15 -5.36 -1.33 -5.29 -4.08 3.38 -7.86 -6.49 2.93 0.11 1.41 -2.73 -5.58 -3.78 -2.66 -3.25 -5.69 -0.76 -3.78 -0.93 -3.67 -2.01 -4.65 -2.09 -4.18 1.9 -2.53 -1.68
CCL19391 (atpE)
-5.19 -1.37 -5.12 -1.21 -5.26 -3.6 3.6 -6.09 -6.64 2.76 0.15 1.35 -3.24 -5.22 -2.84 -3.29 -3.34 -4.63 -1.08 -3.65 -1.15 -2.57 -2.25 -4.97 -2.72 -3.59 1.45 -2.86 -1.49
CCL19392 (atpK)
-4.01 -0.32 -4.36 -0.42 -4.19 -3.28 3.27 -4.97 -5.74 2.68 -0.18 1.14 -2.65 -4.98 -1.8 -2.66 -3.04 -3.66 -1.02 -2.8 -0.55 -0.98 -2.34 -4.43 -2.24 -2.96 2.13 -2.59 -2.41
CCL19393 (atpI)
-3.58 -0.09 -3.28 -0.0 -3.31 -3.24 3.25 -4.44 -3.32 2.62 0.14 1.15 -2.32 -3.57 -1.32 -2.32 -2.69 -3.11 -0.46 -2.25 -0.15 -1.48 -1.55 -3.71 -2.22 -2.42 1.5 -2.42 -1.59
CCL19394 (BN171_3090013)
-1.83 0.93 -1.8 0.37 -1.99 -1.82 2.79 -1.88 -1.09 2.09 -0.31 0.57 -2.17 -2.6 -0.35 -1.82 -1.72 -1.55 -0.31 -1.19 0.09 -0.2 -1.26 -2.76 -1.79 -1.52 1.81 -2.02 -1.96
CCL19627 (rnr)
0.55 0.18 0.26 0.08 -0.08 -0.35 0.41 -0.0 -0.48 0.4 0.21 0.01 0.3 -0.05 -0.33 0.58 -0.35 -0.43 -0.17 0.12 -0.59 -0.47 -0.14 -1.07 -0.13 -0.45 0.75 -0.17 -0.12
CCL19890 (BN171_3590011)
-2.32 -4.58 -1.82 -2.64 -1.99 -0.36 1.49 -4.18 -1.33 0.62 0.57 0.54 1.53 -2.2 -3.3 1.87 -0.55 -2.66 0.09 -0.69 -1.27 -1.7 -0.34 0.5 0.81 -2.62 1.05 0.87 0.49
CCL19926 (BN171_3600004)
-3.03 0.42 -3.23 -0.41 -3.28 -2.16 2.4 -4.05 -1.09 2.73 0.59 -0.61 -0.63 -3.8 -0.93 -1.85 -0.52 -3.44 0.24 -2.44 1.22 0.37 -1.42 -1.1 -1.57 -3.3 1.23 -1.16 -1.42
CCL20455 (fusA)
-2.33 0.32 -1.3 0.18 -3.45 -4.26 2.69 -4.36 0.69 1.72 -0.17 0.27 -0.53 -4.07 -1.01 -2.81 -0.98 -4.26 -0.94 -1.65 1.1 1.72 -3.28 -0.63 -3.46 -4.31 1.55 -3.66 -2.04
CCL20476 (BN171_540001)
-1.13 -0.73 -1.39 -0.72 -1.37 -1.83 3.04 -1.57 -2.02 2.6 0.24 -0.21 -1.08 -1.89 -1.92 -0.13 -0.3 -1.41 0.25 -1.5 -1.53 -1.81 -0.27 -2.29 -0.68 -1.79 0.15 -0.7 -1.37
CCL20702 (BN171_950003)
-0.85 -0.31 -0.23 -0.1 -0.59 0.29 0.32 -0.47 -0.51 0.32 -0.15 0.02 0.34 -1.4 -0.76 0.0 -1.36 -1.09 0.39 0.03 -0.37 1.86 0.23 0.6 0.05 -0.06 0.14 -0.68 -0.15
CCL20703 (BN171_950004)
-1.09 -0.63 -0.06 -0.17 -0.31 0.56 0.64 -0.68 -0.85 0.6 0.1 0.31 0.27 -1.84 -0.98 0.35 -1.25 -1.19 0.56 -0.32 -0.4 0.94 0.59 0.84 0.35 -0.42 0.53 -0.82 -0.33

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.