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(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
Gene | BHI | Basal Medium | CD196,BHI | CD196,Basal Medium | CD196,Log,BHI | ClnR mutant | LB-CD16 | Log,BHI | LuxS KO | ND-CD12 | ND-CD13 | ND-CD17 | R20291 | R20291,BHI | R20291,Basal Medium | R20291,Heme+ | R20291,Log | R20291,Log,BHI | Strain 630 | Strain 630,BHI | Strain 630,Basal Medium | Strain 630,Faecal water+ | Strain 630,HPUra+ | Strain 630,Lag | Strain 630,Log | Strain 630,Log,BHI | Strain 630,Sporulating | TW11 | UK1 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CCL17165 (BN171_1330026) | -0.23 | -0.45 | 0.52 | 0.04 | 0.07 | -0.41 | 1.24 | 0.0 | -1.49 | -0.08 | 0.27 | 0.43 | 0.34 | -0.39 | -0.48 | 0.81 | -0.55 | -0.5 | -0.13 | -0.61 | -1.92 | 1.15 | 0.72 | -0.8 | -1.15 | -1.07 | -0.55 | -0.0 | 0.21 |
CCL17178 (BN171_1330039) | 0.33 | -0.4 | 0.23 | 0.08 | 0.02 | -0.67 | 1.07 | -0.16 | -1.07 | 0.51 | 0.22 | 0.78 | 0.61 | -0.06 | -0.64 | 0.12 | -1.24 | -0.15 | -0.67 | -0.19 | 0.06 | 1.3 | 0.39 | -0.5 | -1.3 | -1.3 | -1.56 | -0.3 | -0.32 |
CCL17195 (BN171_1380006) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.86 | - |
CCL17202 (spoIIID) | -2.36 | -2.06 | -0.96 | -0.13 | -0.25 | -3.64 | 2.55 | -1.73 | -6.49 | -0.96 | -3.31 | -5.78 | 0.51 | -1.32 | -1.38 | -2.49 | -3.96 | -1.52 | -4.13 | -1.71 | -1.89 | 3.81 | -6.15 | -5.58 | -5.07 | -1.93 | 0.43 | -1.9 | - |
CCL17304 (BN171_1430031) | -1.34 | -2.9 | 0.82 | 1.36 | 0.36 | 1.27 | -0.84 | -2.92 | 0.55 | 0.56 | 0.17 | 0.49 | 0.62 | -0.4 | -2.2 | -0.44 | -0.17 | -2.02 | 0.12 | -0.68 | -0.36 | -0.23 | -0.42 | -2.06 | -0.35 | -0.93 | -3.27 | 1.92 | -1.35 |
CCL17305 (BN171_1430032) | -0.07 | -1.04 | 1.25 | 1.62 | 1.22 | -0.1 | -0.46 | -1.12 | -0.19 | -0.62 | -0.52 | -0.41 | 0.28 | -0.33 | -1.18 | 0.12 | -0.77 | -0.53 | -0.41 | 0.37 | 0.35 | -1.45 | -0.08 | -1.15 | -0.45 | 0.47 | -1.41 | 0.66 | -0.5 |
CCL17437 (BN171_1500013) | -1.63 | - | -0.96 | -0.15 | -1.57 | -0.01 | 1.84 | -2.5 | - | 1.61 | 2.05 | 0.56 | 0.71 | -0.7 | -1.98 | - | -0.85 | -1.45 | -0.86 | - | -1.89 | - | -0.37 | -0.65 | -1.39 | -3.28 | 0.12 | 1.91 | 1.34 |
CCL17693 (BN171_1680008) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -1.26 | - | - | - | - | - | - | 0.99 | 0.86 | - | 0.63 | 4.54 | - |
CCL17902 (BN171_1930014) | 0.95 | -0.48 | 0.16 | -0.29 | -0.68 | -0.59 | -0.89 | -1.12 | -1.09 | -0.8 | 0.11 | -0.33 | 0.65 | 0.27 | -0.46 | 1.18 | -0.36 | -0.55 | -0.57 | -0.08 | -0.11 | 1.5 | -0.64 | -0.47 | 0.71 | -1.26 | -0.61 | 0.71 | -0.18 |
CCL18149 (BN171_2130006) | - | - | - | - | - | - | - | - | - | - | - | - | -0.65 | - | - | - | -0.54 | - | - | - | - | - | - | - | -0.16 | - | 1.27 | 4.61 | - |
CCL18155 (BN171_2130012) | - | - | - | - | - | - | - | - | - | - | - | - | 2.09 | 2.08 | - | - | -0.71 | - | - | - | - | - | - | - | - | - | 1.26 | 4.13 | - |
CCL18221 (BN171_2170008) | -1.54 | -0.34 | 0.26 | 1.06 | -0.22 | -1.95 | 1.19 | -0.86 | -1.0 | 0.85 | 1.3 | 1.07 | -0.41 | -1.87 | -0.1 | -0.82 | -0.99 | -0.9 | -0.44 | -0.98 | -0.72 | 0.99 | -0.55 | -0.26 | -0.96 | -1.94 | -1.08 | 0.76 | 0.94 |
CCL18363 (argF) | -0.63 | 0.31 | -0.26 | 1.02 | 0.37 | -1.67 | 1.72 | -0.47 | -0.82 | 1.55 | 0.5 | 1.15 | 0.65 | -1.11 | 0.14 | 0.06 | -0.23 | -0.73 | -0.61 | -1.23 | -0.85 | -1.03 | -1.5 | -1.47 | -1.95 | -2.08 | -0.27 | -0.35 | -0.14 |
CCL18364 (argM) | -0.7 | 0.25 | 0.02 | 0.86 | -0.15 | -1.28 | 0.16 | -1.07 | -0.38 | 1.18 | 1.0 | 0.97 | 1.34 | -2.05 | 0.14 | 0.77 | -0.05 | -0.98 | 0.12 | -1.66 | -1.7 | -1.37 | -0.26 | -0.76 | -2.03 | -3.23 | -0.12 | 0.26 | 0.5 |
CCL18446 (BN171_2340006) | -1.41 | -0.07 | -0.83 | 0.62 | -0.67 | -2.15 | 1.21 | -1.84 | -1.35 | 0.58 | 1.02 | 0.58 | 0.12 | -1.99 | 0.36 | 0.14 | -1.26 | -0.89 | 0.1 | -1.25 | 0.24 | 0.74 | -0.84 | -0.74 | -1.42 | -2.61 | -0.77 | 1.75 | 1.03 |
CCL18503 (bioB) | -0.01 | -0.24 | 0.85 | 1.32 | 0.71 | -1.38 | 0.26 | -0.07 | -1.53 | 0.02 | -0.36 | -0.24 | -0.05 | -0.37 | 0.31 | 0.05 | -1.73 | 0.22 | -0.2 | 0.57 | 1.16 | -0.38 | -0.72 | -1.34 | -1.24 | 0.53 | -2.89 | 0.31 | -0.66 |
CCL18535 (BN171_2420002) | -1.44 | -0.94 | 1.05 | 1.94 | 0.93 | -0.75 | 0.44 | -1.23 | -2.67 | -1.5 | -1.15 | -1.41 | 0.83 | -0.44 | 0.41 | -0.42 | -1.43 | -0.42 | -0.72 | -0.06 | 0.5 | 0.36 | 1.29 | -3.09 | -1.14 | -1.08 | -1.46 | 1.27 | -1.61 |
CCL18594 (BN171_2440035) | -0.02 | -0.94 | 0.57 | 1.3 | 0.69 | -1.05 | -0.19 | -1.02 | -0.7 | 0.39 | -0.11 | -0.2 | 0.45 | 0.2 | -0.7 | 0.6 | -0.54 | -0.29 | -0.17 | 0.42 | -0.31 | 0.71 | -0.25 | -0.52 | -0.65 | -0.68 | -1.58 | 0.87 | -0.75 |
CCL18602 (BN171_2440043) | 0.39 | -1.67 | 0.65 | 1.02 | 0.88 | -0.31 | -0.67 | -0.28 | -1.28 | -1.04 | -0.8 | -0.73 | 0.46 | 0.36 | -1.06 | 1.6 | -1.11 | 0.27 | -0.64 | 0.0 | -0.6 | 1.21 | -0.42 | -1.76 | -0.07 | -0.16 | -5.32 | 0.73 | -0.83 |
CCL18610 (BN171_2470004) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.86 | - |
CCL18627 (BN171_2480002) | 0.19 | -2.01 | -0.13 | -0.58 | -1.22 | -1.6 | 0.85 | -1.17 | -1.59 | 1.2 | 0.79 | 0.74 | 0.81 | 0.03 | -2.09 | 0.53 | -0.82 | -1.06 | -0.79 | -0.78 | -1.87 | 1.39 | 0.74 | -1.27 | -0.65 | -1.36 | -0.16 | 0.46 | 1.03 |
CCL18651 (BN171_2480026) | -0.44 | 1.0 | 0.39 | 1.86 | 0.24 | -0.93 | 0.98 | -1.09 | -1.12 | 0.23 | -0.51 | 0.91 | -0.09 | -0.59 | 0.03 | 0.46 | -1.93 | -0.33 | -1.07 | -0.7 | 0.35 | 0.19 | -1.8 | -2.85 | -1.68 | -0.95 | -0.6 | 0.98 | -1.01 |
CCL18677 (BN171_2480052) | -1.08 | 0.14 | -1.36 | 0.3 | -1.41 | -3.25 | 1.37 | -1.15 | -1.07 | 1.42 | 0.65 | 1.05 | -0.16 | -2.31 | -0.44 | -0.46 | -0.67 | -0.89 | -0.02 | -2.03 | -0.31 | -0.23 | 1.06 | 0.43 | -0.96 | -2.72 | 0.23 | 0.51 | 1.13 |
CCL18678 (BN171_2480053) | -0.11 | 0.67 | -0.6 | 0.86 | 0.0 | -1.86 | 1.42 | -0.1 | -2.08 | 0.65 | 0.38 | 0.2 | -0.58 | -1.5 | -0.14 | -1.91 | -0.6 | -0.35 | -0.69 | -0.0 | 0.89 | 0.1 | -1.47 | -1.74 | -0.87 | -0.37 | -1.04 | 1.24 | 0.88 |
CCL18689 (BN171_250002) | -2.03 | -1.93 | 0.72 | 2.02 | 1.18 | -0.93 | 0.54 | -2.7 | 1.85 | 0.45 | 0.23 | 0.52 | -0.39 | -2.17 | -1.58 | 0.44 | 0.25 | -1.38 | -1.3 | -2.89 | -2.4 | -3.42 | -1.32 | -2.27 | -3.06 | -3.11 | -2.4 | 1.9 | -0.03 |
CCL18834 (BN171_2680003) | -0.76 | 0.11 | -0.37 | 1.05 | -0.16 | -1.81 | 2.09 | -1.75 | -0.35 | -0.92 | -0.87 | -0.94 | -0.26 | -1.86 | -0.45 | -0.95 | -1.37 | -1.04 | 0.15 | -1.0 | 0.78 | 0.18 | 1.54 | 0.58 | -0.81 | -1.6 | 0.14 | 0.92 | -1.35 |
CCL18835 (BN171_2680004) | -0.23 | 0.72 | -0.26 | 1.55 | 0.0 | -1.7 | 2.22 | -1.34 | 0.21 | 0.2 | -0.82 | -0.33 | 0.27 | -1.54 | -0.45 | -0.66 | -1.94 | -1.43 | -1.02 | -0.56 | 1.12 | 0.97 | -1.95 | -1.46 | -2.13 | -0.95 | -0.43 | 0.6 | -2.12 |
CCL18836 (ptb) | -0.11 | 0.91 | 0.38 | 2.14 | 0.77 | -2.83 | 1.61 | -0.69 | -0.35 | -0.25 | -1.78 | -1.1 | 0.59 | -0.92 | 0.15 | -0.21 | -1.99 | -1.21 | -1.84 | -0.61 | 1.31 | 0.96 | -3.12 | -2.01 | -3.16 | -0.58 | -1.38 | -0.29 | -2.39 |
CCL18837 (buk) | -0.19 | 0.96 | 0.7 | 2.23 | 1.16 | -2.75 | 1.26 | -0.73 | -0.11 | -0.74 | -2.31 | -1.73 | -0.1 | -1.06 | 0.34 | -0.63 | -0.14 | -0.69 | -1.78 | -0.52 | 0.98 | 1.36 | -3.49 | -2.74 | -4.02 | -0.38 | -1.83 | -0.73 | -2.95 |
CCL18838 (BN171_2680007) | -1.03 | -0.18 | -0.13 | 0.74 | -0.49 | -2.82 | 2.26 | -1.44 | 1.04 | 0.19 | -0.47 | -0.62 | 0.62 | -1.83 | -0.82 | -0.87 | -2.12 | -1.98 | -1.03 | -0.5 | 0.98 | 1.75 | -0.59 | -0.93 | -3.01 | -0.79 | 0.5 | -0.43 | -1.04 |
CCL18839 (BN171_2680008) | -0.68 | 0.22 | -0.44 | 0.62 | -0.52 | -2.22 | 1.85 | -1.42 | 0.61 | -0.37 | -0.62 | -1.67 | 0.25 | -2.58 | -0.25 | -1.62 | -1.96 | -0.86 | -0.79 | -1.14 | 0.43 | 2.91 | -0.77 | -1.13 | -3.23 | -1.4 | 0.44 | -0.83 | -3.1 |
CCL18840 (BN171_2680009) | -1.18 | -0.31 | -1.23 | 0.08 | -0.76 | -2.46 | 1.89 | -1.55 | 0.5 | -0.56 | -1.15 | -1.17 | 0.44 | -2.31 | -0.57 | -0.85 | -1.62 | -1.82 | -0.94 | -1.35 | -0.09 | 3.19 | -1.25 | -1.64 | -3.1 | -1.54 | 0.86 | -0.69 | -1.15 |
CCL19032 (BN171_2820002) | -0.78 | -0.32 | -0.2 | 0.32 | 0.21 | 0.51 | 0.84 | -0.19 | -0.36 | 0.4 | 0.59 | 0.59 | 0.0 | -1.3 | -0.19 | 0.15 | -0.63 | -0.2 | -0.29 | 0.25 | 0.19 | -0.13 | 0.14 | -0.63 | -0.54 | 0.49 | -1.11 | -0.28 | 0.07 |
CCL19172 (BN171_2910007) | -0.17 | 0.84 | 0.04 | 1.41 | 0.08 | -2.26 | -0.17 | -0.79 | -0.0 | 0.66 | 0.61 | 0.95 | -0.05 | -0.96 | 0.23 | -0.15 | -0.95 | -0.66 | -0.32 | -0.65 | -0.01 | -0.94 | 1.13 | -0.43 | -1.32 | -1.56 | -0.62 | -0.05 | -0.12 |
CCL19173 (aroE) | -0.38 | 0.75 | -0.2 | 1.38 | -0.7 | -3.15 | 0.55 | -1.25 | 0.02 | 1.58 | 0.84 | 0.55 | -0.13 | -0.68 | 0.08 | 0.18 | -1.59 | -1.14 | -0.5 | -0.88 | 0.04 | 0.67 | 0.98 | -1.39 | -1.87 | -1.68 | -1.56 | -0.3 | -0.45 |
CCL19200 (BN171_2950002) | -1.42 | -0.49 | -1.7 | -0.47 | -1.63 | -1.26 | 1.13 | -1.75 | -1.83 | 1.52 | 1.36 | 1.4 | -0.03 | -1.47 | -0.42 | 0.14 | -0.76 | -1.57 | 0.04 | -0.73 | 0.25 | -0.68 | 0.11 | -0.08 | -0.43 | -1.62 | -0.51 | 1.28 | 0.61 |
CCL19201 (BN171_2950003) | -0.36 | -0.37 | -1.24 | 0.45 | -1.03 | -3.9 | 1.65 | -1.74 | -1.49 | 1.49 | 0.92 | 1.07 | -0.02 | -1.09 | -0.02 | -0.47 | -0.72 | -1.04 | -0.13 | -1.16 | 0.26 | -0.71 | 0.01 | 0.07 | -0.66 | -2.1 | -0.94 | 1.3 | 0.21 |
CCL19331 (BN171_3050005) | -1.65 | -1.92 | -1.02 | -0.7 | -0.87 | -2.36 | 2.56 | -3.18 | -1.74 | -0.69 | -0.03 | 1.04 | 0.08 | -5.38 | -1.37 | 0.74 | -0.74 | -1.69 | 0.63 | -3.16 | -1.81 | -1.66 | 1.77 | 0.99 | -2.13 | -4.2 | 0.55 | 0.34 | 0.91 |
CCL19333 (BN171_3050007) | -0.24 | -0.46 | 0.49 | 1.34 | -0.21 | -0.62 | 1.81 | -2.1 | 0.68 | -0.08 | -0.61 | -0.44 | 0.62 | -0.21 | -0.52 | 0.93 | -1.14 | -1.19 | -0.46 | 0.38 | 1.03 | -3.22 | -0.44 | -0.97 | -0.57 | -0.81 | -0.84 | -0.66 | -0.9 |
CCL19452 (BN171_3150015) | -2.21 | -4.23 | -2.73 | -3.18 | -2.17 | -1.26 | 2.1 | -2.81 | -1.39 | 1.44 | 1.9 | 0.73 | -1.04 | -1.82 | -3.22 | -1.09 | 0.32 | -1.26 | 0.29 | -1.78 | -0.64 | -1.85 | -0.17 | -2.49 | -0.52 | -1.57 | -3.48 | 2.01 | 1.7 |
CCL19481 (murQ) | -0.36 | -0.06 | 0.54 | 1.72 | 0.99 | -0.09 | 0.58 | -0.41 | -1.24 | 0.28 | 0.08 | 0.47 | 0.38 | -0.87 | -0.21 | 0.21 | -0.94 | -0.34 | 0.03 | -0.23 | -0.93 | 0.36 | -0.13 | -1.49 | -1.59 | -0.69 | -2.45 | 0.32 | -0.44 |
CCL19482 (BN171_3180006) | -0.74 | -0.2 | 0.57 | 1.96 | 0.43 | -1.18 | 1.82 | -1.07 | -1.13 | 1.39 | 0.45 | 0.8 | 1.07 | -0.73 | -0.45 | -0.09 | -1.51 | -0.94 | -0.05 | -1.21 | -2.07 | -1.94 | -0.68 | -2.77 | -1.81 | -1.73 | -2.44 | 0.39 | -2.25 |
CCL19492 (BN171_3180016) | -0.67 | 0.63 | -0.76 | 0.02 | -0.32 | -1.34 | 0.98 | -1.08 | -2.01 | 0.92 | 0.4 | 0.56 | -0.07 | -0.4 | 0.48 | 0.49 | -0.69 | 0.23 | -0.18 | -0.08 | 0.95 | -3.43 | -0.18 | -1.13 | -0.72 | -0.58 | -2.4 | 0.12 | 1.37 |
CCL19494 (BN171_3180018) | -1.23 | 0.46 | -1.67 | -0.02 | -1.1 | -2.05 | 1.52 | -0.86 | -1.04 | 1.36 | 1.2 | 0.78 | -0.08 | -1.35 | 0.48 | 0.34 | -0.88 | -0.69 | -0.32 | -1.81 | 0.6 | -0.45 | -0.44 | -0.98 | -1.16 | -1.52 | -2.63 | 0.63 | 1.3 |
CCL19495 (BN171_3180019) | -2.0 | -0.03 | -2.14 | 0.14 | -2.04 | -4.33 | 1.42 | -1.96 | -2.17 | 1.92 | 1.41 | 0.37 | 0.21 | -2.35 | 0.31 | 0.95 | -1.62 | -1.16 | -0.55 | -2.77 | 0.88 | -0.73 | -2.13 | 0.31 | -1.05 | -2.89 | -2.7 | 1.29 | 1.0 |
CCL19557 (BN171_3260008) | -2.05 | -1.31 | -1.23 | 0.01 | -1.08 | -1.27 | 2.39 | -1.68 | -2.02 | 0.66 | -0.43 | 0.11 | 0.37 | -2.52 | -0.61 | 0.33 | -0.96 | -1.28 | 0.13 | -1.48 | 0.53 | 2.17 | 0.19 | -1.15 | -1.19 | -1.47 | 0.82 | -2.75 | -0.26 |
CCL19558 (BN171_3260009) | -1.82 | -0.59 | -1.11 | 0.55 | -0.57 | -2.47 | 2.0 | -1.64 | -1.92 | 0.37 | -0.56 | -0.27 | 0.14 | -2.42 | -0.55 | 0.39 | -1.18 | -0.99 | -0.33 | -1.21 | 0.81 | 2.39 | -0.57 | -1.73 | -1.82 | -0.98 | 0.16 | 0.75 | -0.2 |
CCL19894 (BN171_3590015) | -0.91 | -1.09 | -0.32 | 0.47 | 0.27 | 1.17 | -1.58 | -1.07 | -0.02 | -3.46 | -2.09 | -0.0 | 0.62 | -1.46 | -0.68 | 0.85 | -0.0 | -0.15 | 0.36 | -0.15 | 1.03 | 0.49 | 0.46 | 0.29 | 0.91 | -0.24 | -1.41 | 0.62 | -2.73 |
CCL19895 (BN171_3590016) | -0.63 | -0.76 | 0.14 | 0.91 | 0.53 | 1.04 | - | -0.32 | -1.2 | -2.8 | -0.97 | -1.7 | 0.96 | -0.64 | -0.54 | 1.51 | -0.52 | -0.3 | -0.05 | -0.03 | 0.43 | 0.07 | 0.04 | -0.41 | 0.55 | 0.01 | -2.61 | 1.3 | -2.15 |
CCL19896 (BN171_3590017) | -0.56 | -0.42 | 0.12 | 0.54 | 0.65 | 1.13 | 0.02 | -0.23 | -0.29 | -0.94 | 0.13 | -0.24 | 0.74 | -1.1 | -0.43 | 1.45 | -0.67 | -0.15 | 0.13 | -0.16 | 0.29 | -0.16 | -0.59 | -1.23 | -0.01 | -0.1 | -2.81 | 0.47 | -1.58 |
CCL20248 (BN171_390002) | -1.03 | -1.01 | -1.07 | 0.12 | -0.32 | -1.64 | -0.78 | -1.1 | -1.9 | 0.98 | -0.84 | 0.52 | 1.25 | -0.77 | -0.45 | 1.68 | -0.14 | -1.53 | 0.54 | -0.41 | 0.22 | 0.42 | 0.19 | -0.12 | -0.04 | -1.12 | -2.27 | 0.74 | 0.85 |
CCL20604 (BN171_710002) | 0.08 | -0.92 | -0.25 | 1.11 | 0.42 | -1.94 | -0.71 | -0.73 | -2.47 | 1.1 | 0.48 | 0.83 | 0.98 | -0.28 | -0.69 | 1.78 | -0.13 | 0.08 | -0.19 | -1.46 | -1.96 | -0.17 | -0.76 | -2.07 | 0.45 | -0.97 | -2.25 | 0.3 | -0.39 |
CCL20605 (BN171_710003) | -0.83 | -1.94 | 0.38 | 0.03 | 0.75 | 0.17 | 1.04 | -0.64 | -1.35 | 0.62 | 0.63 | 0.66 | 0.21 | -0.27 | -1.56 | 0.09 | -0.55 | 0.23 | -0.59 | -0.31 | -1.58 | -0.68 | -1.15 | -0.33 | -0.5 | 0.15 | -1.71 | 1.13 | 1.04 |
CCL20657 (BN171_840001) | -3.03 | -3.88 | 2.09 | 1.77 | 0.49 | -1.52 | 0.52 | -5.12 | -1.99 | 0.47 | 0.27 | 0.21 | 0.66 | -1.24 | -2.36 | 0.8 | -0.89 | -2.56 | -1.25 | -1.67 | -0.36 | 1.09 | -1.23 | -2.42 | -1.02 | -2.77 | -0.12 | 1.48 | -0.61 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.