Heatmap: Cluster_33 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL17165 (BN171_1330026)
-0.23 -0.45 0.52 0.04 0.07 -0.41 1.24 0.0 -1.49 -0.08 0.27 0.43 0.34 -0.39 -0.48 0.81 -0.55 -0.5 -0.13 -0.61 -1.92 1.15 0.72 -0.8 -1.15 -1.07 -0.55 -0.0 0.21
CCL17178 (BN171_1330039)
0.33 -0.4 0.23 0.08 0.02 -0.67 1.07 -0.16 -1.07 0.51 0.22 0.78 0.61 -0.06 -0.64 0.12 -1.24 -0.15 -0.67 -0.19 0.06 1.3 0.39 -0.5 -1.3 -1.3 -1.56 -0.3 -0.32
CCL17195 (BN171_1380006)
- - - - - - - - - - - - - - - - - - - - - - - - - - - 4.86 -
CCL17202 (spoIIID)
-2.36 -2.06 -0.96 -0.13 -0.25 -3.64 2.55 -1.73 -6.49 -0.96 -3.31 -5.78 0.51 -1.32 -1.38 -2.49 -3.96 -1.52 -4.13 -1.71 -1.89 3.81 -6.15 -5.58 -5.07 -1.93 0.43 -1.9 -
CCL17304 (BN171_1430031)
-1.34 -2.9 0.82 1.36 0.36 1.27 -0.84 -2.92 0.55 0.56 0.17 0.49 0.62 -0.4 -2.2 -0.44 -0.17 -2.02 0.12 -0.68 -0.36 -0.23 -0.42 -2.06 -0.35 -0.93 -3.27 1.92 -1.35
CCL17305 (BN171_1430032)
-0.07 -1.04 1.25 1.62 1.22 -0.1 -0.46 -1.12 -0.19 -0.62 -0.52 -0.41 0.28 -0.33 -1.18 0.12 -0.77 -0.53 -0.41 0.37 0.35 -1.45 -0.08 -1.15 -0.45 0.47 -1.41 0.66 -0.5
CCL17437 (BN171_1500013)
-1.63 - -0.96 -0.15 -1.57 -0.01 1.84 -2.5 - 1.61 2.05 0.56 0.71 -0.7 -1.98 - -0.85 -1.45 -0.86 - -1.89 - -0.37 -0.65 -1.39 -3.28 0.12 1.91 1.34
CCL17693 (BN171_1680008)
- - - - - - - - - - - - - - - - -1.26 - - - - - - 0.99 0.86 - 0.63 4.54 -
CCL17902 (BN171_1930014)
0.95 -0.48 0.16 -0.29 -0.68 -0.59 -0.89 -1.12 -1.09 -0.8 0.11 -0.33 0.65 0.27 -0.46 1.18 -0.36 -0.55 -0.57 -0.08 -0.11 1.5 -0.64 -0.47 0.71 -1.26 -0.61 0.71 -0.18
CCL18149 (BN171_2130006)
- - - - - - - - - - - - -0.65 - - - -0.54 - - - - - - - -0.16 - 1.27 4.61 -
CCL18155 (BN171_2130012)
- - - - - - - - - - - - 2.09 2.08 - - -0.71 - - - - - - - - - 1.26 4.13 -
CCL18221 (BN171_2170008)
-1.54 -0.34 0.26 1.06 -0.22 -1.95 1.19 -0.86 -1.0 0.85 1.3 1.07 -0.41 -1.87 -0.1 -0.82 -0.99 -0.9 -0.44 -0.98 -0.72 0.99 -0.55 -0.26 -0.96 -1.94 -1.08 0.76 0.94
CCL18363 (argF)
-0.63 0.31 -0.26 1.02 0.37 -1.67 1.72 -0.47 -0.82 1.55 0.5 1.15 0.65 -1.11 0.14 0.06 -0.23 -0.73 -0.61 -1.23 -0.85 -1.03 -1.5 -1.47 -1.95 -2.08 -0.27 -0.35 -0.14
CCL18364 (argM)
-0.7 0.25 0.02 0.86 -0.15 -1.28 0.16 -1.07 -0.38 1.18 1.0 0.97 1.34 -2.05 0.14 0.77 -0.05 -0.98 0.12 -1.66 -1.7 -1.37 -0.26 -0.76 -2.03 -3.23 -0.12 0.26 0.5
CCL18446 (BN171_2340006)
-1.41 -0.07 -0.83 0.62 -0.67 -2.15 1.21 -1.84 -1.35 0.58 1.02 0.58 0.12 -1.99 0.36 0.14 -1.26 -0.89 0.1 -1.25 0.24 0.74 -0.84 -0.74 -1.42 -2.61 -0.77 1.75 1.03
CCL18503 (bioB)
-0.01 -0.24 0.85 1.32 0.71 -1.38 0.26 -0.07 -1.53 0.02 -0.36 -0.24 -0.05 -0.37 0.31 0.05 -1.73 0.22 -0.2 0.57 1.16 -0.38 -0.72 -1.34 -1.24 0.53 -2.89 0.31 -0.66
CCL18535 (BN171_2420002)
-1.44 -0.94 1.05 1.94 0.93 -0.75 0.44 -1.23 -2.67 -1.5 -1.15 -1.41 0.83 -0.44 0.41 -0.42 -1.43 -0.42 -0.72 -0.06 0.5 0.36 1.29 -3.09 -1.14 -1.08 -1.46 1.27 -1.61
CCL18594 (BN171_2440035)
-0.02 -0.94 0.57 1.3 0.69 -1.05 -0.19 -1.02 -0.7 0.39 -0.11 -0.2 0.45 0.2 -0.7 0.6 -0.54 -0.29 -0.17 0.42 -0.31 0.71 -0.25 -0.52 -0.65 -0.68 -1.58 0.87 -0.75
CCL18602 (BN171_2440043)
0.39 -1.67 0.65 1.02 0.88 -0.31 -0.67 -0.28 -1.28 -1.04 -0.8 -0.73 0.46 0.36 -1.06 1.6 -1.11 0.27 -0.64 0.0 -0.6 1.21 -0.42 -1.76 -0.07 -0.16 -5.32 0.73 -0.83
CCL18610 (BN171_2470004)
- - - - - - - - - - - - - - - - - - - - - - - - - - - 4.86 -
CCL18627 (BN171_2480002)
0.19 -2.01 -0.13 -0.58 -1.22 -1.6 0.85 -1.17 -1.59 1.2 0.79 0.74 0.81 0.03 -2.09 0.53 -0.82 -1.06 -0.79 -0.78 -1.87 1.39 0.74 -1.27 -0.65 -1.36 -0.16 0.46 1.03
CCL18651 (BN171_2480026)
-0.44 1.0 0.39 1.86 0.24 -0.93 0.98 -1.09 -1.12 0.23 -0.51 0.91 -0.09 -0.59 0.03 0.46 -1.93 -0.33 -1.07 -0.7 0.35 0.19 -1.8 -2.85 -1.68 -0.95 -0.6 0.98 -1.01
CCL18677 (BN171_2480052)
-1.08 0.14 -1.36 0.3 -1.41 -3.25 1.37 -1.15 -1.07 1.42 0.65 1.05 -0.16 -2.31 -0.44 -0.46 -0.67 -0.89 -0.02 -2.03 -0.31 -0.23 1.06 0.43 -0.96 -2.72 0.23 0.51 1.13
CCL18678 (BN171_2480053)
-0.11 0.67 -0.6 0.86 0.0 -1.86 1.42 -0.1 -2.08 0.65 0.38 0.2 -0.58 -1.5 -0.14 -1.91 -0.6 -0.35 -0.69 -0.0 0.89 0.1 -1.47 -1.74 -0.87 -0.37 -1.04 1.24 0.88
CCL18689 (BN171_250002)
-2.03 -1.93 0.72 2.02 1.18 -0.93 0.54 -2.7 1.85 0.45 0.23 0.52 -0.39 -2.17 -1.58 0.44 0.25 -1.38 -1.3 -2.89 -2.4 -3.42 -1.32 -2.27 -3.06 -3.11 -2.4 1.9 -0.03
CCL18834 (BN171_2680003)
-0.76 0.11 -0.37 1.05 -0.16 -1.81 2.09 -1.75 -0.35 -0.92 -0.87 -0.94 -0.26 -1.86 -0.45 -0.95 -1.37 -1.04 0.15 -1.0 0.78 0.18 1.54 0.58 -0.81 -1.6 0.14 0.92 -1.35
CCL18835 (BN171_2680004)
-0.23 0.72 -0.26 1.55 0.0 -1.7 2.22 -1.34 0.21 0.2 -0.82 -0.33 0.27 -1.54 -0.45 -0.66 -1.94 -1.43 -1.02 -0.56 1.12 0.97 -1.95 -1.46 -2.13 -0.95 -0.43 0.6 -2.12
CCL18836 (ptb)
-0.11 0.91 0.38 2.14 0.77 -2.83 1.61 -0.69 -0.35 -0.25 -1.78 -1.1 0.59 -0.92 0.15 -0.21 -1.99 -1.21 -1.84 -0.61 1.31 0.96 -3.12 -2.01 -3.16 -0.58 -1.38 -0.29 -2.39
CCL18837 (buk)
-0.19 0.96 0.7 2.23 1.16 -2.75 1.26 -0.73 -0.11 -0.74 -2.31 -1.73 -0.1 -1.06 0.34 -0.63 -0.14 -0.69 -1.78 -0.52 0.98 1.36 -3.49 -2.74 -4.02 -0.38 -1.83 -0.73 -2.95
CCL18838 (BN171_2680007)
-1.03 -0.18 -0.13 0.74 -0.49 -2.82 2.26 -1.44 1.04 0.19 -0.47 -0.62 0.62 -1.83 -0.82 -0.87 -2.12 -1.98 -1.03 -0.5 0.98 1.75 -0.59 -0.93 -3.01 -0.79 0.5 -0.43 -1.04
CCL18839 (BN171_2680008)
-0.68 0.22 -0.44 0.62 -0.52 -2.22 1.85 -1.42 0.61 -0.37 -0.62 -1.67 0.25 -2.58 -0.25 -1.62 -1.96 -0.86 -0.79 -1.14 0.43 2.91 -0.77 -1.13 -3.23 -1.4 0.44 -0.83 -3.1
CCL18840 (BN171_2680009)
-1.18 -0.31 -1.23 0.08 -0.76 -2.46 1.89 -1.55 0.5 -0.56 -1.15 -1.17 0.44 -2.31 -0.57 -0.85 -1.62 -1.82 -0.94 -1.35 -0.09 3.19 -1.25 -1.64 -3.1 -1.54 0.86 -0.69 -1.15
CCL19032 (BN171_2820002)
-0.78 -0.32 -0.2 0.32 0.21 0.51 0.84 -0.19 -0.36 0.4 0.59 0.59 0.0 -1.3 -0.19 0.15 -0.63 -0.2 -0.29 0.25 0.19 -0.13 0.14 -0.63 -0.54 0.49 -1.11 -0.28 0.07
CCL19172 (BN171_2910007)
-0.17 0.84 0.04 1.41 0.08 -2.26 -0.17 -0.79 -0.0 0.66 0.61 0.95 -0.05 -0.96 0.23 -0.15 -0.95 -0.66 -0.32 -0.65 -0.01 -0.94 1.13 -0.43 -1.32 -1.56 -0.62 -0.05 -0.12
CCL19173 (aroE)
-0.38 0.75 -0.2 1.38 -0.7 -3.15 0.55 -1.25 0.02 1.58 0.84 0.55 -0.13 -0.68 0.08 0.18 -1.59 -1.14 -0.5 -0.88 0.04 0.67 0.98 -1.39 -1.87 -1.68 -1.56 -0.3 -0.45
CCL19200 (BN171_2950002)
-1.42 -0.49 -1.7 -0.47 -1.63 -1.26 1.13 -1.75 -1.83 1.52 1.36 1.4 -0.03 -1.47 -0.42 0.14 -0.76 -1.57 0.04 -0.73 0.25 -0.68 0.11 -0.08 -0.43 -1.62 -0.51 1.28 0.61
CCL19201 (BN171_2950003)
-0.36 -0.37 -1.24 0.45 -1.03 -3.9 1.65 -1.74 -1.49 1.49 0.92 1.07 -0.02 -1.09 -0.02 -0.47 -0.72 -1.04 -0.13 -1.16 0.26 -0.71 0.01 0.07 -0.66 -2.1 -0.94 1.3 0.21
CCL19331 (BN171_3050005)
-1.65 -1.92 -1.02 -0.7 -0.87 -2.36 2.56 -3.18 -1.74 -0.69 -0.03 1.04 0.08 -5.38 -1.37 0.74 -0.74 -1.69 0.63 -3.16 -1.81 -1.66 1.77 0.99 -2.13 -4.2 0.55 0.34 0.91
CCL19333 (BN171_3050007)
-0.24 -0.46 0.49 1.34 -0.21 -0.62 1.81 -2.1 0.68 -0.08 -0.61 -0.44 0.62 -0.21 -0.52 0.93 -1.14 -1.19 -0.46 0.38 1.03 -3.22 -0.44 -0.97 -0.57 -0.81 -0.84 -0.66 -0.9
CCL19452 (BN171_3150015)
-2.21 -4.23 -2.73 -3.18 -2.17 -1.26 2.1 -2.81 -1.39 1.44 1.9 0.73 -1.04 -1.82 -3.22 -1.09 0.32 -1.26 0.29 -1.78 -0.64 -1.85 -0.17 -2.49 -0.52 -1.57 -3.48 2.01 1.7
CCL19481 (murQ)
-0.36 -0.06 0.54 1.72 0.99 -0.09 0.58 -0.41 -1.24 0.28 0.08 0.47 0.38 -0.87 -0.21 0.21 -0.94 -0.34 0.03 -0.23 -0.93 0.36 -0.13 -1.49 -1.59 -0.69 -2.45 0.32 -0.44
CCL19482 (BN171_3180006)
-0.74 -0.2 0.57 1.96 0.43 -1.18 1.82 -1.07 -1.13 1.39 0.45 0.8 1.07 -0.73 -0.45 -0.09 -1.51 -0.94 -0.05 -1.21 -2.07 -1.94 -0.68 -2.77 -1.81 -1.73 -2.44 0.39 -2.25
CCL19492 (BN171_3180016)
-0.67 0.63 -0.76 0.02 -0.32 -1.34 0.98 -1.08 -2.01 0.92 0.4 0.56 -0.07 -0.4 0.48 0.49 -0.69 0.23 -0.18 -0.08 0.95 -3.43 -0.18 -1.13 -0.72 -0.58 -2.4 0.12 1.37
CCL19494 (BN171_3180018)
-1.23 0.46 -1.67 -0.02 -1.1 -2.05 1.52 -0.86 -1.04 1.36 1.2 0.78 -0.08 -1.35 0.48 0.34 -0.88 -0.69 -0.32 -1.81 0.6 -0.45 -0.44 -0.98 -1.16 -1.52 -2.63 0.63 1.3
CCL19495 (BN171_3180019)
-2.0 -0.03 -2.14 0.14 -2.04 -4.33 1.42 -1.96 -2.17 1.92 1.41 0.37 0.21 -2.35 0.31 0.95 -1.62 -1.16 -0.55 -2.77 0.88 -0.73 -2.13 0.31 -1.05 -2.89 -2.7 1.29 1.0
CCL19557 (BN171_3260008)
-2.05 -1.31 -1.23 0.01 -1.08 -1.27 2.39 -1.68 -2.02 0.66 -0.43 0.11 0.37 -2.52 -0.61 0.33 -0.96 -1.28 0.13 -1.48 0.53 2.17 0.19 -1.15 -1.19 -1.47 0.82 -2.75 -0.26
CCL19558 (BN171_3260009)
-1.82 -0.59 -1.11 0.55 -0.57 -2.47 2.0 -1.64 -1.92 0.37 -0.56 -0.27 0.14 -2.42 -0.55 0.39 -1.18 -0.99 -0.33 -1.21 0.81 2.39 -0.57 -1.73 -1.82 -0.98 0.16 0.75 -0.2
CCL19894 (BN171_3590015)
-0.91 -1.09 -0.32 0.47 0.27 1.17 -1.58 -1.07 -0.02 -3.46 -2.09 -0.0 0.62 -1.46 -0.68 0.85 -0.0 -0.15 0.36 -0.15 1.03 0.49 0.46 0.29 0.91 -0.24 -1.41 0.62 -2.73
CCL19895 (BN171_3590016)
-0.63 -0.76 0.14 0.91 0.53 1.04 - -0.32 -1.2 -2.8 -0.97 -1.7 0.96 -0.64 -0.54 1.51 -0.52 -0.3 -0.05 -0.03 0.43 0.07 0.04 -0.41 0.55 0.01 -2.61 1.3 -2.15
CCL19896 (BN171_3590017)
-0.56 -0.42 0.12 0.54 0.65 1.13 0.02 -0.23 -0.29 -0.94 0.13 -0.24 0.74 -1.1 -0.43 1.45 -0.67 -0.15 0.13 -0.16 0.29 -0.16 -0.59 -1.23 -0.01 -0.1 -2.81 0.47 -1.58
CCL20248 (BN171_390002)
-1.03 -1.01 -1.07 0.12 -0.32 -1.64 -0.78 -1.1 -1.9 0.98 -0.84 0.52 1.25 -0.77 -0.45 1.68 -0.14 -1.53 0.54 -0.41 0.22 0.42 0.19 -0.12 -0.04 -1.12 -2.27 0.74 0.85
CCL20604 (BN171_710002)
0.08 -0.92 -0.25 1.11 0.42 -1.94 -0.71 -0.73 -2.47 1.1 0.48 0.83 0.98 -0.28 -0.69 1.78 -0.13 0.08 -0.19 -1.46 -1.96 -0.17 -0.76 -2.07 0.45 -0.97 -2.25 0.3 -0.39
CCL20605 (BN171_710003)
-0.83 -1.94 0.38 0.03 0.75 0.17 1.04 -0.64 -1.35 0.62 0.63 0.66 0.21 -0.27 -1.56 0.09 -0.55 0.23 -0.59 -0.31 -1.58 -0.68 -1.15 -0.33 -0.5 0.15 -1.71 1.13 1.04
CCL20657 (BN171_840001)
-3.03 -3.88 2.09 1.77 0.49 -1.52 0.52 -5.12 -1.99 0.47 0.27 0.21 0.66 -1.24 -2.36 0.8 -0.89 -2.56 -1.25 -1.67 -0.36 1.09 -1.23 -2.42 -1.02 -2.77 -0.12 1.48 -0.61

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.