Heatmap: Cluster_10 (HCCA)

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(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL16967 (BN171_1030017)
-2.34 0.73 -1.14 1.25 -2.3 -1.75 -2.49 -1.52 -0.09 -0.88 0.07 - 2.07 -2.11 0.99 2.08 0.4 -1.54 0.49 -2.12 0.62 0.17 -2.06 -2.48 -2.01 - 0.09 - 1.27
CCL16968 (BN171_1030018)
-0.21 0.5 -1.16 0.16 -0.98 -1.64 0.54 -1.11 -0.38 -1.27 -0.68 -0.26 1.64 -1.62 0.24 1.5 0.46 -1.04 0.4 -1.64 0.13 0.81 0.76 -0.43 -0.37 -1.96 0.88 - -0.57
CCL16969 (BN171_1030019)
-0.57 -0.06 -0.73 0.39 0.19 -0.76 -0.72 -0.46 -0.81 -0.32 -0.09 -0.08 0.97 -0.94 0.19 1.1 0.31 0.03 0.1 -0.42 -0.24 1.01 1.08 -0.57 -0.53 -0.81 0.6 - -0.21
CCL17119 (BN171_1280003)
-1.53 -1.52 0.02 0.61 -0.07 - 1.49 -2.36 -2.37 0.75 0.81 0.6 2.9 -0.03 1.56 -0.25 0.65 1.35 -5.14 - - - - - - - - -2.04 -
CCL17152 (BN171_1330013)
-0.18 0.99 0.91 2.26 0.82 -1.49 -2.79 -0.49 -0.15 -3.04 -3.37 -2.87 1.82 -0.63 0.45 1.09 -1.3 -0.52 -1.73 -0.97 0.63 -0.11 -0.89 -2.73 -1.5 -1.32 -2.44 0.56 -4.41
CCL17153 (nagA)
-0.24 0.95 0.64 2.55 1.27 -1.01 -1.97 -0.74 -1.59 -2.26 -2.8 -2.48 1.11 -0.32 0.53 0.98 -1.26 -0.46 -1.55 -0.88 0.55 -0.08 -1.22 -2.38 -1.28 -1.11 -1.59 0.51 -3.29
CCL17154 (nagB)
-1.03 -0.18 0.19 1.83 0.07 -0.22 -0.93 -1.73 -1.79 -1.41 -1.68 -1.57 1.58 -1.0 -0.64 2.12 -0.99 -1.29 -1.04 -1.05 0.51 -0.24 -0.6 -0.5 0.35 -1.41 -0.24 1.14 -2.32
CCL17163 (BN171_1330024)
- -2.55 -0.99 -2.15 -2.31 1.18 0.28 - 0.91 -0.62 -0.67 -1.18 2.49 -1.01 - 2.09 0.45 - 0.53 -0.35 -1.19 - -0.09 -1.04 -0.09 - -0.14 1.65 -
CCL17164 (BN171_1330025)
-0.21 -0.98 -1.84 -0.13 -2.68 -0.52 -0.84 -2.41 -0.43 -1.87 -1.05 -0.35 1.75 -0.18 -1.92 1.87 -0.63 -1.03 0.13 -0.05 -0.16 0.26 0.98 -0.02 0.01 -3.84 0.64 1.42 -0.23
CCL17267 (BN171_1420010)
-2.63 -3.28 -3.29 -0.65 -1.86 0.05 0.55 -2.89 -0.05 0.15 0.16 -0.08 2.06 -4.53 -3.92 1.71 -0.21 -4.04 0.16 -3.09 -2.84 -1.81 1.02 0.33 -0.66 - 1.34 1.49 0.62
CCL17455 (BN171_1500031)
-3.27 -5.64 -2.67 -2.13 -1.88 -1.77 0.98 -6.09 -1.99 1.89 1.71 1.81 1.06 -1.71 -3.95 -0.03 -0.65 -2.84 -0.23 -3.19 -3.74 -2.92 1.42 -0.91 -0.94 -4.42 -3.54 1.86 1.21
CCL17589 (yycF)
- - - - - - - - - - - - 4.86 - - - - - - - - - - - - - - - -
CCL17656 (BN171_1640046)
-3.27 -3.38 -3.32 -3.47 -4.2 -5.21 1.28 -2.78 -3.42 1.82 1.81 2.15 -1.17 -6.59 -4.32 -3.49 -0.31 -3.96 -0.24 -5.93 -5.64 -5.87 1.36 0.58 -2.33 -6.4 -2.88 1.87 1.98
CCL17795 (kdpA)
-1.55 -2.53 -1.19 0.57 -0.74 -1.65 -1.26 -3.06 -2.93 -2.62 -2.09 -3.33 3.52 -2.29 -1.25 1.67 -1.94 -1.91 0.44 -1.38 -0.4 -0.01 -0.16 -1.03 -0.66 -1.98 -0.89 1.17 -3.18
CCL17796 (kdpB)
-0.52 -1.55 -0.46 0.72 -0.3 -0.97 -1.37 -1.71 -2.33 -1.68 -1.82 -1.72 3.22 -0.86 -1.3 1.52 -1.19 -0.92 -0.1 -0.2 -0.71 0.33 -0.51 -0.7 -1.16 -0.78 -0.81 0.69 -2.48
CCL17797 (kdpC)
0.39 -1.7 0.07 0.28 -0.68 -0.01 -0.54 -0.69 -1.46 -4.06 -0.97 -1.33 2.92 0.17 -1.81 1.0 -0.9 -0.46 -0.38 0.26 -0.78 -1.06 -0.16 -0.22 -0.77 -0.32 -0.53 0.52 -1.61
CCL17831 (vanG)
-0.36 -2.01 -0.2 0.31 -0.12 -0.15 -0.07 -3.19 0.03 0.54 0.17 0.13 2.41 -1.05 -1.51 0.75 -0.53 -1.07 0.18 -0.49 -1.05 0.13 0.14 -0.22 1.25 -1.37 -1.48 - -0.39
CCL17832 (vanY)
-0.12 -0.66 -0.24 0.67 -0.47 -0.54 0.56 -1.85 -0.53 1.15 0.39 0.62 2.02 -1.14 -1.3 0.68 -0.59 -0.81 0.05 -0.32 -0.81 -0.44 0.22 -0.47 0.72 -0.51 -2.55 - -0.34
CCL18028 (BN171_2030014)
-0.78 -0.16 -0.85 0.38 -1.01 -0.35 0.15 -1.43 -0.04 -0.65 0.39 0.63 0.63 -2.09 -0.94 0.35 -0.72 -1.38 0.09 -1.17 -0.93 -0.65 1.18 0.88 -0.17 -1.89 0.76 1.6 0.28
CCL18029 (BN171_2030015)
-1.63 -0.51 -1.11 -0.23 -0.79 -0.57 1.31 -1.53 -0.23 0.78 -0.14 0.22 0.78 -0.64 -0.49 0.33 -0.09 -1.04 -0.15 -0.71 -0.64 -1.1 0.36 1.14 -0.22 -2.04 1.03 1.05 -0.22
CCL18305 (BN171_2210005)
-0.54 -3.55 0.53 0.39 -0.57 -1.12 0.44 -3.29 1.48 1.1 0.63 0.68 1.47 -0.73 -2.19 1.01 -0.17 -1.32 -0.99 -1.64 -1.85 -1.95 0.06 0.73 0.86 -3.01 -0.96 - 0.49
CCL18477 (trxB)
-0.46 -0.07 -0.01 -0.08 -0.52 -2.5 1.13 -0.63 -1.09 0.8 1.1 1.39 -0.3 -2.42 -0.46 -1.88 -0.09 -0.77 -0.16 -2.02 -2.27 -1.73 1.42 0.45 -2.72 -3.17 -1.06 1.02 1.45
CCL18554 (BN171_2420021)
0.72 -0.76 0.16 1.25 0.21 -0.34 0.82 -1.29 -2.08 -0.35 0.15 -0.37 1.14 0.87 -0.66 0.74 -1.19 -0.29 -0.74 0.4 -0.66 -0.11 0.23 -1.23 -0.85 -1.54 0.49 -0.96 -0.38
CCL18635 (BN171_2480010)
-0.84 -0.03 1.51 2.81 1.11 -1.31 -2.14 -1.97 -0.45 -2.05 -0.98 -1.0 1.23 -0.06 0.63 -0.7 -2.19 -0.45 -1.02 -0.73 -0.06 0.17 -1.38 -2.25 -1.67 -1.76 -2.17 0.24 -1.49
CCL18636 (BN171_2480011)
-0.96 -0.88 0.65 2.28 0.43 -2.68 -0.72 -3.09 -2.3 -2.1 -0.7 -0.82 0.61 0.2 -0.11 -2.03 -2.01 -0.84 -0.91 -1.29 0.25 -0.5 -2.55 -2.85 -2.1 -3.34 -0.77 3.08 -1.01
CCL18637 (BN171_2480012)
-1.32 0.04 0.37 2.54 0.75 -4.08 -1.12 -2.63 -4.11 -2.27 -1.63 -2.11 0.82 -0.12 0.8 -3.15 -2.69 -0.18 -0.38 -1.71 0.1 -0.26 -4.12 -2.92 -1.77 -3.12 0.1 2.78 -2.39
CCL18638 (nanA)
-1.56 -0.13 0.09 2.29 0.38 -3.16 -0.53 -2.58 -3.22 -0.39 -0.69 -1.33 1.25 -0.07 0.5 -2.55 -2.18 -0.3 -0.46 -2.17 -0.26 -0.12 -4.11 -2.96 -1.4 -3.53 -0.08 2.74 -0.57
CCL18639 (nanE)
-0.7 0.51 1.11 2.78 1.11 -2.66 -2.12 -1.55 -2.92 -2.08 -2.34 -3.31 0.86 0.78 1.39 -2.13 -2.54 0.55 -0.72 -1.71 0.13 0.01 -4.27 -3.68 -2.29 -2.73 -1.92 1.26 -2.24
CCL18674 (BN171_2480049)
0.25 -0.58 0.38 0.36 0.05 -0.83 0.36 0.01 -1.7 -0.45 0.44 -0.49 0.28 -0.07 -0.61 0.96 -0.22 -0.07 -0.11 0.07 -1.22 -0.21 0.85 -0.02 -0.51 -1.02 0.35 1.05 -1.43
CCL18802 (BN171_2640001)
-0.1 -0.4 0.26 0.33 0.69 0.07 -1.95 -0.34 -1.5 -0.44 -0.42 -0.18 1.15 -0.09 -0.62 -0.26 -0.26 -0.12 -0.41 -0.12 -1.18 1.88 -1.09 0.58 0.46 -0.24 -2.79 0.62 -1.51
CCL18906 (BN171_2720006)
-1.1 -2.03 -0.56 -0.35 -0.73 0.02 0.7 -1.8 -0.25 0.73 0.55 0.61 0.41 -1.15 -1.89 0.41 -0.01 -0.79 0.29 -0.57 -1.14 -2.52 1.29 0.4 -0.37 -1.77 -0.02 1.72 0.3
CCL18907 (BN171_2720007)
-0.64 -0.58 -0.28 0.01 -0.64 0.41 -0.26 -0.78 -0.2 0.3 -0.32 0.23 0.65 -0.61 -1.07 0.62 -0.1 -0.18 0.35 -0.2 -0.78 -0.59 0.91 -1.28 -0.83 -0.72 -0.06 1.88 -0.25
CCL18908 (BN171_2720008)
-2.06 -2.25 -2.47 -1.28 -1.92 0.44 0.41 -0.87 -0.85 -1.47 -0.78 -0.81 0.22 -1.68 -1.68 -0.67 0.02 0.21 0.83 -1.31 -1.59 0.2 1.15 -0.78 -0.58 -1.37 1.67 2.64 -0.16
CCL18909 (BN171_2720009)
-1.47 -0.75 -1.17 -0.36 -1.09 1.05 0.87 -0.12 -0.84 -1.54 -0.75 -0.24 -0.21 -0.62 -0.74 -1.21 0.04 0.88 0.83 -0.56 -1.15 -0.03 0.84 -0.67 -0.78 -0.11 0.95 1.51 0.25
CCL18910 (BN171_2720010)
-1.88 -0.94 -2.03 -0.44 -2.04 0.81 0.15 -0.69 -1.01 -0.68 0.4 1.08 0.27 -1.11 -1.55 -0.91 0.01 0.18 0.88 -0.67 -1.83 0.09 1.14 -0.78 -1.1 -1.25 1.08 1.6 0.69
CCL18911 (BN171_2720011)
-2.59 -2.36 -2.03 -1.15 -2.16 0.07 1.26 -2.77 -0.47 0.59 0.7 1.19 0.44 -1.2 -2.14 -2.02 -0.68 -1.12 0.62 -0.66 -2.06 -2.41 1.26 0.36 -1.14 -2.18 1.07 1.87 0.96
CCL18912 (BN171_2720012)
-1.85 -1.42 -0.83 -0.56 -1.51 -0.27 0.89 -1.11 -2.26 1.07 0.85 0.97 0.46 -1.29 -1.86 -0.61 -0.58 -0.53 0.25 -0.87 -1.88 -1.9 1.64 0.19 -1.45 -1.73 -0.03 1.74 0.96
CCL19237 (BN171_300003)
-1.71 -1.73 -0.78 1.34 0.8 -0.42 - 0.15 - - - -0.29 0.39 -2.02 0.64 - -0.69 0.24 0.35 - - 2.87 0.44 0.3 -0.31 -0.26 1.65 - -
CCL19446 (BN171_3150009)
-0.15 0.52 -0.14 0.32 -0.36 -2.77 0.41 -0.1 -1.93 0.58 1.19 1.44 -0.14 -2.17 -0.1 -1.59 -1.15 -0.26 -0.07 -1.57 -1.54 -3.98 0.72 0.76 -1.77 -2.23 -1.07 1.04 1.49
CCL19468 (trxA)
-5.47 -4.97 -6.31 -5.21 -6.78 -6.54 1.08 -5.71 -2.73 0.8 1.92 2.1 -0.84 -6.55 -6.25 -2.51 -1.37 -5.68 0.64 -5.49 -5.12 -4.65 2.16 -1.53 -3.59 -6.87 -2.55 1.49 2.6
CCL19562 (bglG)
-3.44 -5.4 -1.5 -2.28 -1.39 -0.31 0.11 -3.35 -2.07 0.93 0.7 0.84 1.77 1.33 -2.36 0.71 -1.74 0.82 1.19 0.48 -2.36 -0.29 -0.34 -0.6 0.3 -1.02 -2.51 -0.05 0.65
CCL19605 (BN171_3290018)
- - 2.24 1.24 1.02 - - -0.98 - - - - 3.9 -0.98 -0.37 - 1.66 - - - - - - - - - - - -
CCL19606 (BN171_3290019)
0.31 0.96 1.14 2.23 0.59 - 1.29 0.47 -2.45 1.38 0.33 0.06 1.44 -0.2 0.68 -1.33 -0.26 0.15 -5.22 - - - - - - - - - -0.05
CCL19607 (BN171_3290020)
- - - 0.37 0.77 - 0.55 -1.02 - - 0.8 2.6 3.33 0.81 - 0.87 1.37 - - - - - - - - - - - -
CCL19743 (phoU)
-0.16 -2.2 0.39 -1.34 -1.37 -1.68 -0.23 -1.6 -1.85 -2.17 -1.27 -0.78 1.15 1.99 -2.13 -0.7 -1.16 -1.84 1.49 2.06 -1.93 -0.56 1.79 -1.0 -2.37 -1.48 -0.91 0.78 -1.56
CCL19744 (pstB)
0.19 -1.11 0.43 -1.0 -1.46 -2.99 -0.79 -1.28 -0.98 -1.46 -0.47 -1.46 1.49 1.7 -1.28 -1.07 -0.92 -1.12 1.48 1.94 -2.09 -0.92 1.66 -0.71 -2.56 -1.69 -0.51 0.51 -1.28
CCL19745 (pstA)
0.04 -2.38 0.81 -1.05 -1.69 -3.43 -1.24 -2.14 -0.87 -0.56 -1.85 -2.44 1.53 1.95 -2.39 -0.49 -1.35 -1.7 1.03 2.15 -1.53 -0.69 1.26 -0.83 -1.79 -1.98 -0.09 1.12 -1.38
CCL19834 (BN171_3530001)
0.3 -0.87 -0.14 1.01 -0.04 -0.13 -1.55 -1.34 -2.84 -1.1 -0.53 -0.46 1.62 -0.57 -0.66 1.59 -0.7 -0.49 0.42 -0.88 -1.28 -1.03 -0.05 -0.54 1.01 -1.05 -1.7 1.8 -2.38
CCL19835 (BN171_3530002)
0.55 -0.21 0.23 1.53 0.68 -0.99 -1.18 -1.51 -2.05 -1.19 -1.37 -2.23 1.28 -1.19 -0.2 1.24 -1.06 -0.29 0.38 -1.42 -1.29 -0.56 -0.43 -0.23 1.19 -1.29 -3.9 1.68 -0.46
CCL20199 (BN171_3780005)
- - - - - - - - - - - - - - - - - - - - - - - - - - 1.97 4.65 -
CCL20221 (BN171_3800001)
- - 0.33 - - - - - - - - - 3.8 - - - - - - - - - - 3.17 -1.41 - 0.65 1.54 -
CCL20222 (BN171_3800002)
- - - - - 2.87 - - - - - - 4.14 - - - - - -1.82 - - - - 1.24 - - -0.05 -1.29 -
CCL20223 (BN171_3800003)
- - - - - - - - - - - - 3.9 - - - - - - - - - - 3.25 - - -0.56 1.93 -
CCL20224 (BN171_3800004)
- - - - - - - - - - - - 3.27 - - - -2.33 - - - - - - 4.16 -1.08 - -1.14 -1.73 -
CCL20233 (BN171_3840001)
- - - - - - - - - - - - 4.18 - - - 3.44 - - - - - - - - - - - -
CCL20237 (BN171_3860004)
-1.82 -0.19 -0.85 0.74 0.13 0.29 -1.0 -2.07 - - 0.06 0.58 1.6 0.96 2.55 - 0.33 1.77 -2.42 1.06 -1.46 - - -2.0 -1.59 0.13 -1.97 - -
CCL20245 (BN171_3890001)
-0.2 0.91 - 0.26 - - - 0.61 - - - - 2.57 - 2.51 3.28 -3.13 1.06 - - - - - - - - - - -
CCL20271 (REP)
- - - - - - - - - - - - 4.28 - - - -0.13 - 1.81 1.68 - - 1.01 - - - - - -
CCL20318 (BN171_4140001)
- -1.15 - -0.57 - -1.75 2.46 - - 0.72 2.32 2.28 2.95 -2.01 - - 0.39 -1.04 -2.41 - - - - -3.24 -2.83 - -1.45 - -
CCL20364 (BN171_4240003)
- - - - - - - - - - - - 4.86 - - - - - - - - - - - - - - - -
CCL20423 (BN171_4410001)
0.07 0.9 1.27 2.63 -1.32 - - -0.36 - - - - 2.0 0.85 0.84 2.7 -0.08 0.37 - - - - - - - - - - -
CCL20477 (BN171_540002)
-0.17 -1.19 -0.22 0.7 0.36 -2.55 0.29 -1.35 -1.76 0.21 0.15 0.39 1.02 0.06 -0.96 1.14 0.22 0.58 0.5 -2.08 -1.69 -1.71 0.86 -2.56 -0.83 -1.29 -2.99 1.82 -0.1
CCL20478 (BN171_540003)
-1.58 -3.65 0.06 0.4 -0.28 -2.84 0.37 -3.51 -1.02 0.82 0.04 0.41 1.42 -0.46 -2.73 0.94 0.44 -1.22 0.44 -2.56 -2.56 -5.67 1.47 -2.54 -0.99 -4.61 -4.41 2.34 0.77
CCL20627 (BN171_770004)
- - - - - 2.54 - - - - - - 3.43 - - - 2.33 - 2.73 - - - - - - - -0.38 - -
CCL20660 (BN171_870001)
0.42 -1.65 -0.11 -0.77 0.48 0.38 -1.8 0.44 -2.26 -1.06 -0.99 -1.47 0.43 0.46 -1.22 0.94 -0.29 0.6 0.31 0.58 -1.22 -2.54 0.51 0.79 1.34 0.35 -2.92 0.59 -0.7
CCL20662 (BN171_870003)
-1.56 -4.13 -1.07 -1.34 -0.72 0.03 1.29 -2.97 -2.04 1.32 1.44 1.14 1.08 -1.08 -2.63 0.94 -0.33 -1.23 0.2 -1.26 -2.57 -1.43 0.4 -1.19 0.49 -2.14 -0.35 1.17 0.53
CCL20663 (BN171_870004)
-0.24 -0.27 -0.07 0.34 -1.02 -0.89 0.45 -1.93 -0.55 -0.07 -0.74 0.04 1.59 -0.22 0.31 0.19 -0.27 -1.36 0.79 -0.53 0.78 -2.02 0.94 -0.4 -0.17 -1.45 0.57 0.34 -0.63
CCL20664 (BN171_870005)
-0.26 -0.16 -0.38 0.1 -0.47 0.54 0.63 -1.18 -0.9 0.43 -0.38 -0.53 1.89 0.14 0.28 0.48 -0.46 -1.2 0.59 -0.65 1.0 - 0.47 -0.75 -0.36 -1.82 -0.99 0.01 -0.66
CCL20665 (BN171_880001)
0.58 0.19 0.72 1.86 1.08 - 0.63 -0.17 -0.07 1.04 -1.55 0.76 1.35 0.14 1.26 1.26 0.32 0.18 -5.77 - - - - - - - - - -0.6
CCL20666 (BN171_880002)
1.04 0.63 0.44 1.4 0.55 - 1.26 0.23 0.44 0.89 -0.03 -0.21 1.39 0.42 1.09 1.61 0.19 0.07 - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.