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(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | BHI | Basal Medium | CD196,BHI | CD196,Basal Medium | CD196,Log,BHI | ClnR mutant | LB-CD16 | Log,BHI | LuxS KO | ND-CD12 | ND-CD13 | ND-CD17 | R20291 | R20291,BHI | R20291,Basal Medium | R20291,Heme+ | R20291,Log | R20291,Log,BHI | Strain 630 | Strain 630,BHI | Strain 630,Basal Medium | Strain 630,Faecal water+ | Strain 630,HPUra+ | Strain 630,Lag | Strain 630,Log | Strain 630,Log,BHI | Strain 630,Sporulating | TW11 | UK1 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CCL17594 (BN171_160010) | -1.81 | -1.48 | -1.55 | -0.46 | -1.51 | -3.31 | 2.17 | -2.47 | -0.83 | 1.88 | -0.0 | 1.86 | -0.55 | -2.65 | -1.92 | -0.74 | -1.04 | -2.31 | 1.1 | -2.5 | -0.4 | -2.73 | -0.36 | 2.07 | -1.38 | -3.28 | 0.56 | - | -0.52 |
CCL17595 (BN171_160011) | -2.06 | -2.04 | -1.76 | -0.92 | -1.47 | -3.11 | 1.97 | -1.67 | -3.26 | 1.64 | -0.34 | 1.26 | -1.32 | -3.0 | -2.12 | -1.14 | -0.09 | -2.1 | 1.58 | -1.01 | -0.47 | -4.33 | -0.42 | 2.38 | -1.62 | -2.34 | 1.66 | - | -1.7 |
CCL17777 (BN171_180001) | -3.27 | -1.32 | -1.89 | -1.24 | -1.8 | -1.42 | -0.19 | -2.87 | -1.73 | 1.61 | 2.31 | 1.08 | 0.56 | -1.78 | -0.95 | -0.38 | -1.13 | -1.81 | 1.29 | -3.69 | -0.58 | 0.61 | -0.23 | -1.44 | -0.26 | -2.05 | -2.37 | - | 2.24 |
CCL18281 (BN171_220033) | 0.28 | 0.8 | 0.23 | 0.26 | -0.84 | -0.96 | 0.09 | -0.89 | 0.14 | 0.06 | -0.18 | 0.05 | 0.58 | -0.45 | 0.22 | 0.85 | -0.82 | -0.55 | 0.7 | 0.06 | 0.0 | -0.69 | 0.47 | 0.08 | -0.31 | -1.61 | 0.25 | -0.26 | -0.73 |
CCL18282 (splB) | 0.18 | 1.02 | -0.06 | 0.23 | -0.66 | -0.84 | 0.4 | -0.63 | -0.15 | 0.43 | 0.05 | 0.31 | 0.5 | -0.91 | 0.29 | 0.78 | -0.94 | -0.68 | 0.44 | -0.03 | -0.22 | -0.86 | 0.27 | -0.03 | -0.36 | -1.63 | 0.44 | -0.1 | -0.55 |
CCL18473 (BN171_2380004) | -2.33 | -0.93 | -1.51 | -0.09 | -0.86 | -2.79 | 2.53 | -2.09 | -0.66 | 1.0 | 0.71 | 1.39 | -0.22 | -2.61 | -1.34 | -1.52 | -0.83 | -1.92 | 0.94 | -2.73 | -3.08 | -0.16 | 0.94 | -0.51 | -2.1 | -3.26 | 1.5 | -1.72 | 0.7 |
CCL18501 (BN171_240006) | -0.06 | 0.17 | -0.02 | -0.19 | -0.47 | -1.28 | 1.12 | -0.25 | -1.52 | 0.74 | 0.53 | 0.92 | 0.27 | -0.51 | -0.16 | 0.99 | -0.68 | -0.06 | 0.33 | -0.2 | -0.56 | 1.2 | -1.44 | -1.61 | -0.21 | -1.39 | -1.13 | -1.18 | 0.31 |
CCL18877 (ppiB) | 0.24 | -0.38 | 0.17 | -0.28 | 0.28 | -1.07 | 0.41 | -0.28 | -1.2 | 0.29 | 0.22 | 0.25 | 0.04 | 0.15 | -0.31 | 0.51 | -0.47 | 0.24 | 0.04 | 0.73 | -0.23 | 0.56 | -0.65 | -0.54 | 0.66 | -0.64 | -0.65 | -0.66 | 0.21 |
CCL19017 (ldhA) | -1.73 | -0.84 | -2.2 | -0.53 | -2.07 | -1.55 | -0.65 | -2.05 | 1.12 | -0.17 | 0.32 | -0.46 | 0.61 | -2.53 | 0.46 | -0.07 | -0.4 | -0.67 | 1.26 | -1.86 | 0.1 | 0.22 | 1.2 | 0.35 | 0.1 | -1.64 | 1.32 | 0.5 | 0.61 |
CCL19472 (BN171_3170006) | -1.31 | -4.29 | -0.84 | -2.23 | -1.54 | -0.58 | 1.85 | -5.11 | 0.35 | 1.11 | 0.36 | 0.66 | 1.48 | -0.94 | -3.09 | -0.21 | -0.07 | -2.39 | 1.37 | -1.17 | -2.0 | -2.99 | 0.61 | -0.38 | -0.19 | -2.88 | -0.26 | 1.43 | 0.19 |
CCL19504 (xynC) | -1.36 | -1.4 | -0.97 | -0.62 | -0.77 | -0.04 | 0.81 | -1.09 | -2.28 | 0.98 | 1.33 | 1.5 | -0.04 | -0.79 | 0.01 | 0.61 | -0.33 | -0.02 | 0.61 | -1.3 | -0.69 | -0.75 | -0.61 | -0.16 | 0.03 | -1.12 | 0.18 | -0.06 | 0.72 |
CCL19505 (BN171_3180029) | -1.27 | -1.32 | -0.71 | -0.24 | -1.07 | -0.68 | 1.07 | -1.4 | -0.8 | 1.37 | 1.29 | 1.35 | 0.3 | -0.22 | 0.26 | -0.01 | -0.65 | -0.35 | 0.64 | -1.13 | -0.79 | -1.0 | -1.08 | -0.17 | -0.47 | -2.29 | -0.12 | 0.05 | 0.96 |
CCL19568 (BN171_3270006) | 0.54 | -0.61 | 0.45 | -0.12 | -0.14 | -0.65 | 0.5 | -1.08 | 0.48 | 0.26 | -0.13 | -0.43 | 0.45 | -0.01 | -0.51 | -0.06 | -0.35 | -0.31 | 0.85 | 0.05 | -1.15 | -0.99 | 0.46 | -0.15 | 0.39 | -1.1 | 0.58 | 0.52 | -0.89 |
CCL19569 (BN171_3270007) | 0.21 | -1.71 | -0.07 | -0.89 | -1.2 | -0.45 | 1.13 | -2.22 | 0.54 | 0.16 | -0.18 | 0.27 | 0.81 | -0.47 | -1.19 | 0.04 | -0.78 | -0.61 | 1.01 | -0.08 | -1.46 | -0.13 | 1.08 | -0.25 | 0.82 | -1.7 | 0.81 | 0.24 | -1.21 |
CCL19577 (BN171_3270015) | -1.12 | -0.29 | -1.36 | -0.23 | -0.88 | 0.44 | 1.43 | -0.71 | -1.42 | 0.78 | 0.64 | 0.73 | 0.47 | -0.96 | -0.29 | 1.12 | -0.72 | -0.38 | 0.83 | -0.84 | 0.46 | -3.33 | 0.76 | -0.77 | -0.2 | -1.13 | -0.65 | -1.57 | 0.4 |
CCL19623 (BN171_3310003) | -3.13 | -4.82 | -2.17 | -1.63 | -2.55 | -2.13 | 2.05 | -4.42 | -1.9 | 1.94 | 1.39 | 1.59 | 0.61 | -2.91 | -3.61 | 0.58 | -0.56 | -3.89 | 1.29 | -2.7 | -1.81 | -1.93 | 0.92 | -1.38 | -0.61 | -3.81 | -0.83 | 0.8 | 0.61 |
CCL19624 (BN171_3310004) | -0.13 | -0.58 | -0.37 | 0.34 | 0.09 | -2.5 | 1.74 | -0.92 | -1.75 | 1.71 | 1.21 | 1.19 | 0.15 | -0.73 | -1.1 | -0.32 | -0.96 | -0.17 | 0.72 | -0.72 | -0.33 | -2.37 | 0.33 | -2.34 | -1.44 | -0.65 | -1.9 | -2.11 | 0.61 |
CCL19625 (BN171_3310005) | -1.11 | -0.64 | -1.5 | -0.32 | -0.81 | -1.97 | 2.0 | -1.53 | -1.29 | 1.91 | 1.16 | 1.32 | 0.47 | -2.12 | -1.06 | 0.18 | -1.12 | -0.83 | 1.15 | -1.02 | -0.35 | -1.7 | 0.68 | -1.66 | -0.83 | -1.41 | -2.11 | - | 0.63 |
CCL19626 (BN171_3310006) | -0.06 | -0.43 | -0.07 | -0.12 | -0.48 | -0.39 | 1.08 | -1.13 | -1.13 | 0.88 | 0.8 | 1.07 | -0.4 | -0.66 | -0.75 | -0.17 | -0.7 | -0.47 | 0.83 | 0.47 | 0.24 | -4.8 | 0.61 | -1.1 | -0.22 | -0.43 | -1.34 | 0.36 | 0.46 |
CCL19636 (BN171_3340003) | -0.36 | -0.52 | -0.47 | -0.7 | -0.39 | -1.18 | 1.81 | -0.43 | -0.89 | 1.52 | 1.0 | 1.03 | -0.32 | -0.84 | -0.5 | -0.17 | -0.09 | -0.15 | 0.51 | -0.69 | -1.23 | 0.01 | 0.34 | -1.6 | -1.39 | -1.11 | -2.68 | -0.22 | 0.62 |
CCL19637 (BN171_3340004) | -0.49 | -0.47 | -0.52 | -1.16 | -0.03 | -1.56 | 1.84 | -0.23 | -0.38 | 1.54 | 1.03 | 1.28 | 0.06 | -0.84 | -0.52 | 0.33 | -0.31 | -0.06 | 0.29 | -0.79 | -2.1 | -1.01 | 0.09 | -1.93 | -1.36 | -1.28 | -2.75 | 0.0 | 0.47 |
CCL19638 (BN171_3340005) | -1.36 | -1.47 | -1.33 | -1.71 | -1.3 | -1.93 | 2.08 | -1.3 | -0.48 | 1.99 | 1.49 | 1.56 | 0.17 | -1.59 | -1.39 | 0.22 | -0.54 | -1.06 | 0.25 | -1.81 | -2.56 | -0.6 | -0.15 | -2.37 | -1.18 | -2.1 | -3.03 | -0.09 | 1.33 |
CCL19714 (BN171_3420002) | -1.86 | -2.22 | -1.04 | -1.54 | -1.29 | -0.33 | 2.41 | -2.0 | -1.22 | 0.8 | 0.48 | 0.81 | 0.85 | -1.6 | -1.97 | 1.17 | -1.16 | -1.19 | 0.14 | -0.65 | -0.44 | -0.8 | -0.25 | -1.64 | 0.12 | -1.28 | 0.73 | 0.25 | 0.62 |
CCL19725 (prdR) | -0.6 | -0.33 | -0.4 | -0.3 | -0.22 | -0.59 | 0.66 | -1.12 | 0.09 | 0.21 | -0.05 | 0.13 | 0.57 | -0.23 | 0.16 | 0.85 | -1.34 | -0.29 | 0.23 | 0.52 | 0.84 | 0.32 | -0.11 | -0.26 | -0.55 | -0.4 | -0.05 | 0.05 | -0.31 |
CCL19775 (BN171_3470013) | -4.25 | -4.26 | -4.26 | -4.91 | -6.49 | -2.52 | 2.95 | -3.84 | -3.32 | 2.08 | 1.47 | 1.77 | 1.01 | -5.36 | -4.8 | -0.5 | -2.01 | -3.98 | 0.5 | -6.42 | -6.35 | - | 0.92 | -3.59 | -4.86 | -6.68 | -3.71 | -1.29 | 1.72 |
CCL19776 (BN171_3470014) | -0.43 | -1.01 | -0.39 | -0.5 | -0.58 | -3.32 | 1.93 | -0.01 | 0.09 | 0.94 | -0.07 | -0.34 | 0.33 | -0.85 | -0.68 | -0.63 | -1.06 | -0.1 | 0.05 | -0.25 | -0.03 | 1.66 | -1.15 | -0.31 | 0.17 | -1.17 | -0.31 | 0.11 | -0.36 |
CCL19777 (BN171_3470015) | -2.09 | -3.43 | -0.97 | -1.49 | -1.14 | -1.65 | 2.34 | -3.58 | 0.19 | 1.28 | 0.09 | 0.37 | 1.02 | -0.56 | -2.18 | 0.41 | -0.88 | -1.64 | 1.01 | -0.37 | -0.39 | -0.44 | -0.01 | -0.4 | 0.02 | -1.7 | -0.61 | 0.75 | 0.18 |
CCL19778 (BN171_3470016) | -0.47 | -1.13 | -0.62 | -0.91 | -0.94 | -0.48 | 1.55 | -1.5 | 1.13 | 0.36 | -0.13 | -0.22 | 0.42 | -0.52 | -0.94 | 0.28 | -1.09 | -1.1 | 1.04 | -0.1 | -0.46 | 0.75 | 0.34 | -0.05 | 0.04 | -0.8 | 0.16 | -0.06 | -0.21 |
CCL19779 (BN171_3470017) | -0.66 | -1.8 | -0.11 | -0.76 | -0.54 | -0.75 | 2.03 | -2.01 | 0.71 | 0.64 | -0.1 | -0.15 | 0.41 | 0.2 | -1.38 | -0.03 | -0.99 | -1.47 | 0.74 | 0.79 | -0.35 | -1.74 | -0.03 | -0.54 | -0.3 | -0.33 | 0.87 | -0.55 | -0.1 |
CCL19808 (BN171_350002) | -0.44 | 1.09 | -0.7 | 0.57 | -0.48 | -1.07 | 1.37 | -0.1 | -2.0 | 0.35 | 0.27 | 0.13 | -0.08 | -0.77 | 0.71 | -0.67 | -1.23 | -0.46 | 0.62 | -0.27 | 1.22 | -2.36 | -0.06 | 0.3 | -1.13 | -0.76 | 0.05 | - | 0.47 |
CCL19853 (BN171_3570002) | -1.19 | 0.6 | -1.66 | 0.55 | -1.15 | -1.41 | 2.17 | -1.51 | -1.59 | 1.56 | 0.38 | -0.27 | -0.35 | -1.27 | 0.14 | -0.33 | -0.77 | -0.38 | 1.07 | -0.86 | 0.34 | 0.27 | -0.06 | -1.05 | 0.02 | -1.37 | -1.23 | -0.81 | -0.4 |
CCL19854 (BN171_3570003) | -2.74 | -1.01 | -3.58 | -0.89 | -3.23 | -2.04 | 2.6 | -3.47 | -2.8 | 2.0 | 0.85 | 0.03 | 0.15 | -3.1 | -1.32 | 0.27 | -0.82 | -1.8 | 1.18 | -2.83 | -0.87 | 1.2 | 0.0 | -0.85 | 0.31 | -3.39 | -0.41 | -0.89 | 0.17 |
CCL19855 (BN171_3570004) | -2.25 | -0.72 | -2.99 | -0.5 | -2.74 | -1.69 | 2.6 | -3.0 | -3.74 | 1.97 | 0.76 | 0.07 | 0.01 | -2.49 | -0.96 | 0.12 | -0.68 | -1.46 | 1.13 | -2.36 | -0.51 | 1.04 | 0.03 | -1.68 | 0.08 | -2.84 | -0.29 | -0.69 | 0.11 |
CCL19924 (BN171_3600002) | -0.97 | -1.3 | -0.58 | -0.85 | -1.56 | -1.41 | 1.71 | -3.13 | -0.16 | 0.56 | 0.18 | -0.18 | 0.5 | -0.49 | -0.63 | -0.61 | -0.04 | -1.39 | 1.52 | 0.04 | 0.75 | 0.1 | 0.51 | 0.49 | -0.58 | -1.71 | 0.7 | -0.44 | -0.4 |
CCL19929 (EndoA) | -1.84 | -0.52 | -2.04 | -0.65 | -2.58 | -2.16 | 0.78 | -2.62 | 2.0 | -0.13 | -0.09 | -0.47 | 0.77 | -2.93 | -1.82 | 0.31 | -0.71 | -2.32 | 0.72 | -1.85 | -0.34 | -0.19 | 0.48 | 1.53 | 0.11 | -2.91 | 1.87 | -0.44 | -0.7 |
CCL19930 (BN171_3600008) | -0.14 | 0.26 | -0.46 | 0.29 | -0.46 | -1.39 | 0.64 | -0.72 | 0.97 | -0.09 | -0.06 | -0.44 | 0.13 | -0.31 | -0.2 | -0.63 | -1.21 | -0.34 | -0.17 | 0.28 | 0.82 | 0.75 | -0.56 | 0.84 | -0.57 | -0.76 | 1.04 | -1.17 | -0.61 |
CCL19931 (alr) | -1.66 | 0.49 | -1.58 | 0.4 | -1.51 | -1.38 | 1.27 | -2.28 | 1.82 | 0.7 | 0.33 | -0.08 | 0.6 | -2.62 | -1.26 | -0.44 | -1.74 | -2.45 | 0.46 | -1.15 | 0.22 | 0.71 | 0.02 | 0.8 | -1.02 | -1.89 | 1.35 | -1.9 | -0.66 |
CCL19932 (BN171_3600010) | -1.49 | 0.03 | -1.57 | 0.38 | -1.21 | -2.02 | 1.24 | -2.25 | 1.59 | 0.53 | 0.0 | -0.35 | 1.05 | -2.33 | -1.45 | -0.13 | -1.5 | -2.48 | 0.86 | -0.83 | 0.18 | 0.26 | 0.54 | 0.47 | -0.77 | -1.91 | 1.66 | -1.47 | -1.03 |
CCL19933 (BN171_3600011) | -1.93 | -1.75 | -1.35 | 0.13 | -1.35 | -2.15 | 1.45 | -4.77 | 1.97 | 0.95 | 0.47 | 0.14 | 0.42 | -2.76 | -2.19 | -0.11 | -1.32 | -3.05 | 1.17 | -0.72 | 0.23 | -1.25 | 0.97 | 0.63 | -0.49 | -2.0 | 0.9 | -1.1 | -0.28 |
CCL19934 (acpS) | -2.36 | -1.65 | -1.8 | -0.51 | -1.97 | -0.84 | 0.98 | -3.74 | 1.45 | 1.37 | 1.36 | 0.75 | -0.04 | -2.79 | -2.96 | -0.3 | -0.94 | -3.77 | 1.19 | -1.01 | -0.04 | -0.97 | 1.07 | 0.29 | -0.07 | -2.45 | 0.76 | -0.78 | 0.51 |
CCL19990 (BN171_3610033) | -0.74 | -0.48 | -1.0 | -1.29 | -0.55 | -0.71 | 1.9 | -0.55 | -0.88 | 1.07 | 0.88 | 0.99 | 0.09 | -1.09 | -0.67 | 0.01 | -0.76 | -0.15 | 0.5 | -0.5 | -0.31 | 0.03 | -0.29 | -0.09 | -1.5 | -1.39 | 0.42 | -1.09 | 0.77 |
CCL20083 (BN171_3690027) | -0.46 | -1.58 | -1.03 | -0.73 | -0.95 | -2.54 | 3.23 | -2.4 | 0.22 | 1.39 | 0.92 | 0.06 | 0.3 | -1.08 | -0.54 | -0.11 | -0.37 | -1.75 | 0.27 | -1.97 | -0.54 | -2.82 | -1.24 | -2.14 | -1.57 | -2.48 | -3.09 | -1.37 | 0.63 |
CCL20084 (BN171_3690028) | 0.11 | -0.67 | -0.88 | -0.17 | -0.28 | -3.0 | 2.88 | -1.46 | -0.1 | 1.2 | 0.56 | -0.53 | 0.58 | -0.71 | 0.43 | 0.51 | -0.39 | -0.72 | 0.27 | -1.82 | -0.26 | -2.29 | -1.33 | -2.07 | -0.95 | -2.32 | -3.55 | -1.09 | 0.13 |
CCL20156 (BN171_3720001) | 0.11 | 1.1 | -0.07 | 0.58 | -0.38 | -0.8 | 0.48 | -0.27 | -0.9 | 0.16 | -0.17 | 0.07 | 0.16 | -0.43 | 0.4 | -0.19 | -0.77 | -0.4 | 0.64 | -0.04 | 0.14 | 0.65 | 0.22 | -0.05 | -0.54 | -0.86 | 0.06 | -1.26 | -0.41 |
CCL20429 (BN171_450005) | -3.0 | -3.19 | -0.75 | -0.45 | -1.22 | 0.14 | 1.78 | -3.74 | -1.33 | 0.76 | -1.04 | 0.89 | 1.38 | -2.52 | -2.64 | 0.81 | -0.71 | -2.04 | 0.92 | -1.24 | -0.69 | -1.85 | 1.0 | 0.04 | 0.78 | -1.69 | 0.86 | -0.63 | 0.75 |
CCL20430 (BN171_450006) | -0.52 | -0.78 | -0.73 | -1.18 | -0.79 | -0.31 | 0.82 | -0.75 | -1.04 | 0.9 | 0.74 | 0.86 | 0.11 | -0.91 | -0.89 | 0.11 | -0.63 | -0.42 | 0.78 | -0.28 | -0.79 | 1.71 | -0.09 | 0.4 | -0.54 | -1.44 | -0.16 | -1.07 | 0.49 |
CCL20440 (BN171_460004) | -0.4 | -0.59 | -0.15 | -0.73 | -0.52 | -0.34 | 1.74 | -0.68 | -2.0 | 1.41 | 0.4 | 1.15 | 0.23 | -0.83 | -0.92 | 0.33 | -1.31 | -0.41 | 0.36 | -0.02 | -0.88 | 1.02 | 0.42 | -1.18 | -1.21 | -1.12 | -2.08 | -0.86 | 0.26 |
CCL20441 (sip) | -0.26 | -0.09 | -0.15 | -0.58 | -0.15 | -0.47 | 1.62 | -0.11 | -2.73 | 1.2 | -0.18 | 0.66 | -0.55 | -0.86 | -0.48 | -0.7 | -1.68 | -0.16 | -0.07 | 0.18 | -0.66 | 2.14 | -0.15 | -0.92 | -1.06 | -0.31 | -1.74 | -1.19 | -0.33 |
CCL20442 (sip) | -0.67 | -0.61 | -0.08 | -0.67 | -0.23 | -0.97 | 2.06 | -0.58 | -3.71 | 1.32 | 0.28 | 1.01 | -0.36 | -0.76 | -0.86 | -0.39 | -1.54 | -0.75 | -0.02 | 0.09 | -0.73 | 1.77 | -0.01 | -0.97 | -1.09 | -0.41 | -1.44 | -1.33 | -0.06 |
CCL20443 (BN171_460007) | -1.35 | -1.36 | -0.26 | -0.72 | -0.78 | -0.42 | 2.22 | -1.59 | -3.89 | 1.47 | 0.43 | 1.04 | 0.58 | -0.94 | -1.3 | 0.01 | -1.35 | -1.41 | 0.11 | -0.23 | -0.31 | 0.8 | 0.17 | -0.88 | -0.63 | -1.02 | -0.04 | -0.57 | 0.11 |
CCL20471 (BN171_510003) | -0.42 | -0.89 | -0.0 | -0.55 | -0.46 | 0.36 | 1.72 | -1.16 | -0.2 | 0.24 | -0.25 | 0.16 | 0.67 | -0.24 | -0.95 | 0.85 | -1.19 | -0.87 | 0.03 | 0.65 | 0.08 | 0.28 | 0.05 | -0.48 | -0.13 | -0.49 | -0.12 | -0.58 | -0.53 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.