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(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | 0.02% arabinose,A1552 | 0.5mM indole,N16961 | 37C,C6706 | arabinose-,A1552 | E-exponential,5uM AI-2,C6706 | E-exponential,5uM CAI-1,C6706 | E-exponential,5uM DPO,C6706 | E-exponential,Water,C6706 | empty Tn | E-stationary,0.2% L-arabinose,C6706 | LB(2% NaCl),30C,N16961 | LB,C7258 | Log,0.2% L-arabinose,C6706 | Methanol,N16961 | O395 | Polymyxin,C6706 | Polymyxin,VC1639 | riboflavin-,N16961 | riboflavin+,N16961 | TnqstR | TntfoY | TntoX-strep | Water,Rich,N16961 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KNA44739 (VCV51_033941) | 1.36 | -0.74 | 0.27 | 0.44 | -1.43 | -1.35 | -1.36 | -2.37 | 1.22 | 0.1 | -0.41 | - | -0.28 | -0.64 | -4.41 | - | - | 0.05 | 0.02 | 0.92 | 1.55 | 1.68 | -2.39 |
KNA49227 (VCV51_030347) | -0.52 | -2.01 | -0.32 | -1.47 | 0.36 | 0.42 | 0.54 | 0.28 | -1.47 | 0.54 | -1.16 | 0.09 | 0.45 | -2.28 | -0.11 | -0.49 | -0.4 | -1.2 | -1.12 | 2.27 | -2.2 | -0.34 | 0.65 |
KNA49509 (VCV51_033794) | -0.56 | 0.32 | -1.68 | -0.76 | -0.15 | 0.07 | -0.14 | -0.14 | -0.7 | -0.56 | 0.16 | -0.05 | -0.34 | 0.41 | -1.95 | 0.56 | 0.46 | 0.1 | 0.18 | 1.61 | -0.63 | -0.78 | 0.41 |
KNA50226 (VCV51_033686) | -0.51 | -4.48 | -1.56 | -3.42 | -3.93 | -3.37 | -3.47 | -4.44 | -3.17 | -1.4 | -4.23 | -2.7 | -3.63 | -4.85 | -4.45 | -2.61 | -2.4 | -3.51 | -3.25 | 4.21 | -2.5 | 0.35 | -2.31 |
KNA51840 (VCV51_030376) | 0.38 | -0.42 | -0.59 | -0.99 | -0.22 | -0.25 | -0.26 | -0.25 | 0.21 | -0.62 | -0.28 | 0.04 | -0.44 | -0.5 | -0.19 | 0.49 | 0.71 | 0.06 | 0.21 | 0.04 | -0.09 | 0.86 | 0.49 |
KNA51911 (VCV51_033501) | 1.36 | -0.74 | 0.27 | 0.44 | -1.43 | -1.35 | -1.36 | -2.37 | 1.22 | 0.1 | -0.41 | - | -0.28 | -0.64 | -4.41 | - | - | 0.05 | 0.02 | 0.92 | 1.55 | 1.68 | -2.39 |
KNA53342 (VCV51_031633) | 2.99 | -2.79 | -0.64 | -2.57 | -2.54 | -2.27 | -2.27 | -2.69 | -2.6 | -1.25 | -2.65 | -1.33 | -1.44 | -2.82 | -2.86 | -0.31 | -1.06 | -1.41 | -1.25 | -2.22 | -1.74 | 3.12 | -1.92 |
KNA53343 (PilB) | 2.88 | -3.45 | -1.36 | -1.9 | -3.5 | -3.16 | -3.25 | -3.66 | -1.84 | -2.29 | -3.28 | -2.48 | -2.37 | -3.58 | -2.86 | -1.51 | -2.02 | -0.96 | -0.96 | -1.6 | -1.79 | 3.41 | -1.11 |
KNA53630 (VCV51_033305) | 1.41 | -1.09 | -0.16 | -0.74 | -1.26 | -1.05 | -1.05 | -1.29 | 0.07 | -0.51 | -0.35 | -0.12 | -0.38 | -1.05 | -0.59 | 0.52 | 0.6 | -0.82 | -0.54 | 0.01 | -0.03 | 2.06 | -0.26 |
KNA53675 (VCV51_030030) | 2.2 | -2.05 | 0.63 | -1.91 | -2.65 | -2.48 | -2.31 | -2.86 | -1.47 | -1.27 | -1.86 | -1.11 | -1.03 | -2.04 | -2.01 | -1.1 | -0.82 | -1.43 | -1.32 | 0.18 | -0.2 | 3.16 | -1.2 |
KNA53765 (VCV51_030016) | 1.38 | -3.6 | -0.39 | -0.85 | -2.44 | -2.24 | -2.24 | -2.63 | -1.11 | -1.56 | -2.95 | -1.73 | -2.31 | -3.33 | -2.63 | -1.2 | -0.98 | 0.04 | -0.02 | 2.96 | -1.25 | 2.26 | -0.77 |
KNA53908 (VCV51_030835) | 2.35 | -1.87 | -0.51 | -1.07 | -2.05 | -2.38 | -2.0 | -2.2 | -0.17 | -2.63 | -2.71 | -1.15 | -1.0 | -2.13 | -1.39 | -0.4 | -0.49 | -0.61 | -0.51 | -0.2 | -2.22 | 2.97 | 0.05 |
KNA54938 (PilM) | 2.38 | -1.77 | -0.82 | -1.22 | -0.98 | -0.78 | -0.87 | -1.16 | -1.74 | -0.76 | -2.18 | -1.07 | -0.37 | -1.95 | -3.99 | -0.07 | 0.05 | -1.02 | -1.14 | -1.37 | 0.12 | 2.79 | -1.22 |
KNA54939 (VCV51_033142) | 2.98 | -4.22 | -0.65 | -3.37 | -3.69 | -3.27 | -3.41 | -4.04 | -2.78 | -2.29 | -4.24 | -1.72 | -1.64 | -4.15 | -4.87 | -1.82 | -1.44 | -2.79 | -2.63 | -2.82 | 0.13 | 3.37 | -1.61 |
KNA54940 (VCV51_033143) | 2.77 | -4.1 | -0.75 | -3.28 | -3.32 | -3.17 | -3.25 | -3.89 | -2.36 | -2.22 | -3.95 | -1.75 | -1.94 | -3.73 | -4.25 | -1.78 | -1.46 | -2.33 | -2.46 | -2.63 | 0.57 | 3.45 | -1.89 |
KNA54941 (VCV51_033144) | 2.93 | -4.19 | -0.84 | -3.21 | -3.94 | -3.9 | -3.62 | -3.98 | -2.72 | -2.41 | -4.18 | -1.67 | -2.4 | -3.93 | -4.64 | -1.52 | -1.21 | -2.68 | -2.58 | -2.82 | 0.56 | 3.37 | -1.62 |
KNA54942 (PilQ) | 3.03 | -3.33 | -0.74 | -1.86 | -2.41 | -2.34 | -2.3 | -2.81 | -2.06 | -1.56 | -3.28 | -1.49 | -1.51 | -3.18 | -3.12 | -1.44 | -1.02 | -1.62 | -1.54 | -2.12 | 0.41 | 2.99 | -1.1 |
KNA55088 (VCV51_033112) | 1.7 | -1.48 | -0.58 | -1.42 | -1.11 | -1.11 | -0.98 | -1.32 | -0.47 | -0.47 | -1.03 | -0.22 | -0.02 | -1.07 | -1.51 | -0.72 | -0.47 | -1.43 | -1.24 | -0.39 | -0.41 | 2.85 | 0.1 |
KNA55239 (VCV51_031084) | 2.15 | -3.71 | 0.8 | -0.81 | -1.83 | -2.13 | -1.93 | -2.07 | -0.82 | -0.73 | -2.05 | -0.66 | -1.51 | -3.41 | -0.22 | -0.19 | -0.66 | -1.41 | -1.6 | 1.32 | -1.09 | 2.65 | -1.6 |
KNA55240 (VCV51_031085) | 1.78 | -1.93 | 0.2 | -0.61 | -0.6 | -0.56 | -0.55 | -0.62 | -0.3 | -0.45 | -2.0 | -0.71 | -0.82 | -1.94 | -1.04 | -0.05 | -0.26 | -0.82 | -0.72 | 1.18 | -0.44 | 2.03 | 0.02 |
KNA55297 (VCV51_033110) | 0.85 | -2.55 | -0.85 | 0.09 | -3.06 | -3.1 | -3.13 | -3.19 | -0.19 | -3.13 | -2.26 | -2.9 | -2.41 | -2.34 | -2.88 | -0.16 | -0.33 | -1.59 | -1.75 | 3.52 | -0.38 | 0.98 | -0.81 |
KNA55339 (PilW) | 2.0 | -3.96 | 0.39 | -0.39 | -3.83 | -3.63 | -3.67 | -3.74 | -0.06 | -2.61 | -3.57 | -1.76 | -2.1 | -3.85 | -3.1 | -0.29 | -0.42 | -2.72 | -2.68 | 0.03 | -0.36 | 3.3 | 0.1 |
KNA56408 (VCV51_030680) | 3.15 | -3.9 | 0.64 | -2.69 | -4.94 | -4.73 | -4.7 | -5.17 | -2.57 | -2.23 | -2.22 | -0.52 | -1.51 | -4.2 | -1.33 | -0.8 | -1.24 | -3.53 | -2.74 | -2.54 | -2.59 | 2.57 | 1.37 |
KNA56409 (VCV51_030681) | 1.43 | -0.72 | 0.07 | -1.56 | -0.77 | -0.76 | -0.79 | -0.89 | -0.61 | -0.84 | 0.18 | -0.47 | -0.29 | -0.89 | -1.91 | 1.15 | 0.68 | -1.32 | -1.33 | -0.79 | -0.6 | 1.52 | 1.38 |
KNA56881 (VCV51_030516) | 2.59 | -3.81 | -1.79 | -1.99 | -4.14 | -4.27 | -4.18 | -4.14 | -1.95 | -2.8 | -2.94 | -1.64 | -1.08 | -3.68 | -3.63 | -0.27 | 0.04 | -1.81 | -1.77 | -2.18 | 2.02 | 2.87 | -0.73 |
KNA56962 (VCV51_032888) | 2.33 | -3.49 | 0.33 | -1.12 | -2.32 | -1.38 | -1.43 | -3.0 | -0.35 | -0.83 | -2.78 | -1.18 | -0.76 | -4.22 | -3.97 | -0.1 | -0.19 | -3.12 | -2.75 | -0.28 | 1.31 | 2.59 | 0.07 |
KNA56964 (PilW) | 2.58 | -2.18 | 0.86 | -1.46 | -0.45 | 0.16 | 0.19 | -0.58 | 0.8 | -0.41 | -2.53 | -3.39 | -0.51 | -3.79 | -1.65 | -2.88 | -2.05 | -1.12 | -0.05 | 0.08 | 0.42 | 0.91 | 0.01 |
KNA56966 (PilV) | 3.19 | -4.41 | -1.17 | -1.94 | -1.87 | -2.06 | -1.6 | -3.69 | -2.43 | -1.09 | -3.62 | -0.49 | -1.22 | -4.85 | -2.65 | 0.38 | 0.07 | -3.34 | -2.21 | -2.39 | -0.27 | 2.6 | -1.27 |
KNA57811 (VCV51_032780) | 0.69 | -4.15 | -1.92 | -3.49 | -3.79 | -3.65 | -3.77 | -3.79 | -3.97 | 0.06 | -1.54 | -1.21 | -2.66 | -4.36 | -5.64 | -2.61 | -2.06 | -2.94 | -2.96 | 3.11 | 2.28 | 1.96 | -0.9 |
KNA57812 (VCV51_032781) | 0.19 | -1.3 | -1.58 | -1.51 | -2.14 | -2.3 | -1.97 | -2.4 | -1.33 | 0.55 | -1.2 | 0.88 | -0.69 | -1.65 | -1.5 | -0.4 | -0.51 | 0.36 | 0.54 | 2.14 | 1.05 | 1.56 | -0.3 |
KNA57820 (VCV51_032789) | -0.84 | 0.22 | -2.01 | -1.5 | 0.67 | 0.69 | 0.77 | 0.55 | -0.34 | 0.33 | -0.25 | 0.62 | 0.04 | 0.15 | -2.88 | -0.47 | -0.8 | -1.13 | -0.88 | 1.34 | -0.85 | -0.45 | 0.59 |
KNA57840 (VCV51_032809) | 0.77 | -1.32 | -0.69 | -0.49 | -0.15 | -0.06 | -0.01 | -0.15 | -0.12 | -0.12 | -1.24 | 0.5 | -0.2 | -1.18 | -1.11 | 1.08 | 0.83 | -0.37 | -0.4 | -0.13 | -0.06 | 0.69 | 0.53 |
KNA57855 (VCV51_032779) | 0.69 | -4.15 | -1.92 | -3.49 | -3.79 | -3.65 | -3.77 | -3.79 | -3.97 | 0.06 | -1.54 | -1.21 | -2.66 | -4.36 | -5.64 | -2.61 | -2.06 | -2.94 | -2.96 | 3.11 | 2.28 | 1.96 | -0.9 |
KNA59382 (VCV51_031307) | 0.77 | -0.8 | -1.56 | -1.81 | 0.18 | 0.14 | 0.21 | 0.18 | -0.45 | -0.79 | -0.76 | 0.21 | 0.31 | -0.79 | -0.6 | 0.88 | 0.68 | -1.14 | -1.18 | -0.47 | -0.67 | 1.6 | 0.4 |
KNA59405 (VCV51_032584) | 2.48 | -5.47 | 0.81 | -3.79 | -5.38 | -4.82 | -5.2 | -4.88 | -4.35 | -5.07 | -4.65 | -4.58 | -5.74 | -5.5 | -4.59 | -2.69 | -3.2 | -4.84 | -4.45 | 1.15 | -2.1 | 3.63 | -4.8 |
KNA59608 (VCV51_031392) | 1.21 | -1.2 | -0.31 | -0.46 | -0.7 | -0.73 | -0.71 | -0.8 | 0.25 | -0.72 | -1.87 | -0.22 | -0.52 | -1.31 | -0.57 | 1.01 | 0.79 | -0.59 | -0.45 | 0.57 | 0.21 | 1.35 | 0.37 |
KNA59785 (VCV51_032480) | 2.07 | -1.51 | -0.31 | 0.1 | -1.87 | -1.53 | -1.82 | -2.05 | 0.22 | -0.48 | -2.15 | -1.59 | -0.62 | -1.65 | -2.56 | -1.47 | -0.61 | -1.64 | -1.48 | 0.45 | 0.74 | 2.72 | -0.94 |
KNA60608 (VCV51_032197) | 0.32 | -1.77 | -1.14 | -1.29 | -2.17 | -1.69 | -1.93 | -2.0 | -0.95 | 0.86 | -1.17 | 0.83 | -0.42 | -1.74 | -1.28 | -0.77 | -0.44 | 0.1 | 0.19 | 2.03 | 1.16 | 1.47 | -0.13 |
KNA60609 (VCV51_032198) | 0.18 | -4.91 | -30.59 | -16.35 | -16.29 | -5.37 | -6.57 | -15.42 | -4.36 | -1.02 | -2.17 | -1.67 | -3.94 | -4.66 | -6.46 | -2.44 | -1.8 | -4.75 | -4.77 | 3.27 | 2.48 | 2.27 | -7.53 |
KNA60652 (VCV51_032091) | 2.94 | -6.23 | -1.9 | -2.57 | -6.25 | -6.06 | -6.15 | -6.52 | -2.42 | -2.97 | -5.51 | -1.61 | -3.71 | -6.37 | -5.66 | -3.74 | -3.04 | -3.27 | -3.35 | -2.76 | 1.63 | 3.37 | -3.75 |
KNA60666 (VCV51_032105) | 0.16 | -1.45 | 0.12 | -0.41 | -0.03 | 0.2 | -0.01 | -0.45 | -0.59 | 0.35 | -1.38 | 0.14 | -0.08 | -1.13 | -3.1 | -0.24 | 0.37 | 0.44 | 0.25 | 1.04 | 0.91 | 0.34 | -0.03 |
KNA60667 (VCV51_032106) | 0.05 | -0.86 | -0.66 | -0.82 | -0.85 | -0.9 | -0.95 | -1.58 | -0.36 | -0.19 | -0.96 | 0.23 | -0.6 | -0.73 | -2.28 | -0.32 | 0.22 | 0.56 | 0.55 | 1.68 | 1.26 | 1.04 | -0.18 |
KNA60668 (VCV51_032107) | 0.1 | -0.27 | -0.69 | -1.45 | -2.31 | -1.62 | -2.1 | -3.16 | -0.22 | -1.56 | -0.54 | 0.78 | -2.17 | -0.83 | -2.19 | -1.18 | -0.53 | -0.15 | -0.44 | 2.33 | 1.84 | 1.32 | -0.44 |
KNA60669 (VCV51_032108) | 0.31 | -1.67 | -0.21 | -0.73 | -2.04 | -2.01 | -2.0 | -2.63 | -0.67 | -0.23 | -1.0 | 0.39 | -1.29 | -1.49 | -2.89 | -1.48 | -1.04 | 0.01 | 0.09 | 2.29 | 1.75 | 1.57 | -0.4 |
KNA60670 (IcmF) | -0.07 | -2.07 | -0.52 | -1.41 | -1.91 | -1.35 | -1.73 | -2.29 | -1.04 | 0.87 | -0.62 | 1.33 | -1.33 | -1.99 | -2.63 | -0.8 | -0.47 | -0.35 | -0.3 | 2.09 | 1.57 | 1.31 | -0.52 |
KNA60671 (VCV51_032110) | -0.18 | -1.8 | -0.86 | -1.6 | -3.15 | -2.43 | -2.87 | -3.61 | -1.1 | 0.4 | -1.26 | 1.47 | -2.05 | -1.81 | -2.9 | -0.85 | -0.56 | -0.61 | -0.59 | 2.39 | 1.75 | 1.65 | -1.01 |
KNA60672 (VCV51_032111) | 0.24 | -2.58 | -0.59 | -1.32 | -3.34 | -2.6 | -2.96 | -3.23 | -2.0 | 1.32 | -1.25 | 2.22 | -1.52 | -2.66 | -2.13 | -0.45 | 0.03 | -0.29 | -0.35 | 1.63 | 1.17 | 0.95 | -0.16 |
KNA60673 (VCV51_032112) | 0.09 | -2.14 | -1.26 | -1.43 | -3.08 | -2.75 | -2.95 | -3.55 | -1.27 | 0.81 | -1.3 | 1.78 | -1.74 | -2.3 | -1.84 | -0.95 | -0.87 | -0.35 | -0.36 | 2.21 | 1.61 | 1.52 | -1.03 |
KNA60674 (VCV51_032113) | -0.22 | -1.63 | -1.46 | -1.76 | -3.16 | -2.56 | -2.87 | -3.78 | -1.52 | 1.03 | -0.59 | 1.98 | -1.64 | -1.68 | -2.39 | -1.08 | -0.89 | -0.25 | -0.22 | 2.06 | 1.52 | 1.46 | -1.49 |
KNA60675 (VCV51_032114) | -0.2 | -2.05 | -1.66 | -2.14 | -2.58 | -1.97 | -2.48 | -2.95 | -1.94 | 1.5 | -0.4 | 2.08 | -1.65 | -1.93 | -2.62 | -1.58 | -1.54 | -1.14 | -1.11 | 2.05 | 1.58 | 1.43 | -1.31 |
KNA60676 (VCV51_032115) | -0.18 | -2.34 | -1.5 | -1.89 | -3.19 | -2.2 | -2.57 | -3.28 | -1.44 | 1.34 | -0.24 | 1.91 | -1.85 | -2.15 | -1.49 | -1.29 | -1.28 | -0.98 | -0.99 | 2.09 | 1.63 | 1.47 | -1.37 |
KNA60677 (VCV51_032116) | -0.41 | -1.16 | -2.1 | -2.77 | -4.16 | -3.25 | -3.65 | -4.87 | -1.42 | -0.26 | -0.75 | 0.46 | -3.39 | -0.99 | -3.18 | -2.19 | -2.13 | -1.89 | -2.0 | 2.76 | 2.37 | 2.05 | -2.48 |
KNA60678 (VCV51_032117) | -0.33 | -1.7 | -1.24 | -2.5 | -3.38 | -2.58 | -3.04 | -3.76 | -1.66 | 1.2 | -0.22 | 1.52 | -2.17 | -1.59 | -2.99 | -1.55 | -1.62 | -0.91 | -1.09 | 2.31 | 1.82 | 1.75 | -1.81 |
KNA60679 (VCV51_032118) | 0.43 | -2.07 | -0.14 | -1.29 | -3.09 | -2.44 | -2.86 | -3.94 | -1.49 | 1.08 | -0.93 | 2.03 | -2.45 | -1.64 | -1.66 | -0.89 | -0.86 | -1.63 | -1.47 | 1.96 | 1.6 | 1.2 | -0.49 |
KNA60680 (VCV51_032119) | -0.24 | -2.41 | -1.17 | -2.28 | -2.46 | -1.68 | -2.16 | -2.68 | -1.41 | 0.9 | -0.84 | 1.58 | -2.24 | -2.14 | -1.48 | -0.96 | -0.88 | -1.26 | -1.25 | 2.35 | 1.89 | 1.37 | -0.82 |
KNA60681 (VCV51_032120) | -0.11 | -2.37 | -0.82 | -2.49 | -3.63 | -2.09 | -3.05 | -4.05 | -1.6 | 0.64 | -0.67 | 1.14 | -2.94 | -2.05 | -1.55 | -1.12 | -0.93 | -2.28 | -2.2 | 2.55 | 2.27 | 1.46 | -1.51 |
KNA60682 (VCV51_032121) | -0.42 | -2.02 | -1.02 | -2.73 | -2.89 | -1.34 | -2.23 | -3.56 | -1.96 | 1.75 | 0.01 | 1.92 | -2.36 | -1.9 | -0.45 | -0.78 | -0.8 | -2.0 | -1.95 | 1.9 | 1.67 | 0.99 | -1.47 |
KNA60683 (VCV51_032122) | -0.06 | -2.22 | -0.08 | -2.35 | -3.05 | -1.42 | -2.27 | -3.67 | -2.1 | 1.82 | 0.46 | 1.55 | -2.14 | -1.93 | 1.28 | -1.1 | -1.21 | -1.64 | -1.82 | 1.59 | 1.2 | 0.62 | -0.86 |
KNA60684 (VCV51_032123) | 0.24 | -1.52 | -1.25 | -1.01 | -1.29 | -1.17 | -1.28 | -1.85 | -0.78 | 0.93 | 0.26 | 1.0 | -0.61 | -1.42 | -2.28 | 0.01 | 0.45 | -0.05 | -0.11 | 1.4 | 0.68 | 0.37 | 1.2 |
KNA60749 (VCV51_032189) | 2.67 | -4.03 | 0.3 | -2.36 | -3.08 | -3.07 | -3.22 | -3.42 | -2.4 | -1.24 | -3.9 | -1.09 | -1.6 | -3.87 | -3.01 | -1.44 | -0.92 | -1.91 | -1.92 | -2.66 | -0.05 | 3.33 | -1.21 |
KNA60806 (VCV51_032068) | 2.64 | -2.06 | 0.14 | -1.43 | -3.49 | -2.38 | -2.25 | -3.99 | -0.84 | -0.1 | -3.39 | -0.18 | -0.77 | -2.75 | -4.43 | -0.82 | -0.26 | -2.63 | -2.22 | -0.67 | -1.04 | 2.8 | 0.49 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.