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Heatmap: Cluster_9 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA48024 (VCV51_033859)
 -0.45 -0.19 -1.8 -0.93 0.38 0.86 0.65 0.05 -0.04 0.28 0.56 -0.25 -1.19 1.03 -0.56 0.25 0.22 -0.57 -0.46 -0.43 -0.28 -0.14 -0.02
KNA48530 (VCV51_030200)
 -0.31 -0.47 -1.85 -1.09 -0.49 0.03 -0.06 -0.72 -0.98 1.31 -0.05 0.4 1.24 -0.23 -0.52 0.83 0.99 -0.33 -0.12 -0.89 -0.61 -0.4 -0.31
KNA49504 (VCV51_033792)
 -0.36 -0.13 -1.24 -0.42 -1.72 -1.17 -1.53 -1.45 -0.09 -0.25 -0.32 0.62 -0.11 0.14 -1.03 0.91 1.05 1.38 1.24 -0.19 -0.66 -0.22 -0.44
KNA49505 (VCV51_033793)
 -0.0 -0.29 -2.02 0.13 -0.85 -0.41 -0.5 -0.88 0.5 0.11 0.06 -0.49 0.13 0.02 -0.41 -0.0 0.25 1.09 0.99 0.12 -0.12 0.25 -0.58
KNA49506 (VCV51_030308)
 0.25 -1.14 -1.19 0.49 -1.1 -0.51 -0.71 -0.98 0.13 0.59 -0.1 0.03 0.33 -0.87 -1.25 0.13 0.34 1.23 1.11 -0.2 -0.4 0.03 -0.08
KNA49507 (VCV51_030309)
 -0.97 0.19 -2.61 -1.56 -0.5 0.06 -0.17 -0.43 -0.14 0.85 0.53 0.37 0.64 0.31 -0.26 0.27 0.35 0.52 0.5 -0.47 -0.35 -0.1 -0.69
KNA51817 (VCV51_030368)
 -1.33 -0.23 -2.07 -1.44 -0.95 -0.43 -0.55 -0.88 -1.01 0.66 0.22 0.51 0.34 0.18 -0.18 0.69 0.73 1.58 1.34 -1.14 -1.2 -1.12 -0.79
KNA51844 (VCV51_033528)
 -1.38 -1.03 -3.55 -2.02 0.49 1.37 1.1 0.63 -1.04 1.11 0.23 0.05 1.06 -0.35 -0.74 0.07 0.17 0.07 -0.06 -1.31 -1.31 -1.1 -1.56
KNA51845 (VCV51_033529)
 -0.77 -0.32 -2.43 -1.7 0.51 1.23 0.93 0.51 -0.75 0.99 0.08 0.03 0.9 0.43 -1.14 -0.72 -0.56 0.24 0.15 -1.02 -1.03 -0.61 -1.01
KNA52464 (VCV51_030128)
 -1.17 -1.54 -2.37 -1.59 0.06 0.77 0.53 0.16 -1.54 1.55 0.12 0.23 1.26 -1.01 -0.84 0.36 0.35 0.84 0.68 -1.72 -1.74 -1.2 -1.31
KNA53293 (VCV51_031610)
 -0.29 0.13 -0.83 -1.03 -0.45 -0.0 -0.17 -0.44 -0.39 0.01 0.61 -0.07 0.12 0.31 -0.09 0.22 -0.57 1.0 0.9 -0.49 -0.01 -0.12 -0.23
KNA53795 (VCV51_031857)
 0.03 -1.22 0.07 -0.13 -0.16 -0.12 0.0 -0.16 -0.54 1.26 -0.36 0.98 0.57 -1.53 0.11 -0.23 0.05 -0.05 -0.09 -0.3 0.03 -0.3 -0.54
KNA53796 (VCV51_031858)
 -0.4 0.13 -1.21 -0.86 -0.68 -0.44 -0.28 -0.65 -0.43 1.08 0.19 0.98 0.68 -0.02 0.27 0.06 0.2 0.42 0.43 -0.45 -0.44 -0.32 -1.27
KNA53797 (VCV51_031859)
 -0.84 0.83 -1.63 -1.41 -0.33 -0.18 -0.05 -0.28 -0.6 0.85 0.28 0.79 0.61 0.82 0.44 0.09 0.24 -0.05 -0.09 -0.61 -0.67 -0.46 -1.8
KNA53798 (VCV51_031860)
 -0.87 -0.12 -1.32 -1.36 -0.18 0.03 0.18 -0.12 -1.11 1.32 0.26 0.87 0.91 -0.29 0.55 0.28 0.43 0.2 0.26 -1.17 -1.2 -1.03 -1.43
KNA53799 (VCV51_031861)
 -1.03 0.33 -1.11 -1.51 0.16 0.18 0.31 0.15 -0.59 0.98 0.32 0.33 0.72 0.28 0.27 -0.05 0.18 -0.01 0.08 -0.68 -0.72 -0.51 -0.86
KNA53800 (VCV51_031862)
 -0.75 0.54 -1.1 -1.29 0.17 0.22 0.35 0.18 -0.23 0.7 0.34 0.23 0.6 0.59 -0.3 -0.27 -0.37 -0.06 0.01 -0.22 -0.27 -0.14 -1.09
KNA53801 (VCV51_031863)
 -0.86 -1.0 -1.14 -1.2 0.79 0.85 0.96 0.77 -1.55 1.6 -0.13 0.12 1.31 -1.18 -0.82 0.2 -0.13 -0.44 -0.25 -1.56 -1.56 -1.43 -1.69
KNA53802 (VCV51_031864)
 -0.04 -0.63 -0.86 -0.53 0.09 0.22 0.42 0.02 -0.5 1.02 0.32 0.42 0.99 -0.66 -0.66 0.18 -0.1 -0.1 -0.02 -0.59 -0.54 -0.37 -0.19
KNA53803 (VCV51_031865)
 -0.63 -1.2 0.09 -1.12 0.06 0.17 0.33 -0.08 -0.89 1.27 -0.48 0.76 0.89 -1.27 -0.83 0.86 0.64 -0.4 -0.28 -0.74 -0.72 -0.61 0.02
KNA53806 (VCV51_031868)
 -0.78 0.71 0.05 -1.15 0.17 0.07 0.26 -0.0 -0.78 0.18 0.14 0.87 -0.03 0.68 1.09 -0.32 -0.67 -0.46 -0.03 -0.66 -0.59 -0.88 -0.76
KNA53807 (GidA)
 -1.56 0.91 -0.66 -2.02 0.01 0.16 0.27 -0.02 -0.93 0.37 0.48 1.07 0.11 0.78 0.95 -0.27 -0.51 -0.23 0.1 -1.24 -1.33 -1.11 -0.29
KNA53845 (VCV51_030786)
 -0.45 -2.19 -0.99 -0.96 -0.06 0.41 0.23 -0.09 -0.47 1.45 -2.23 0.23 0.44 -2.38 -1.63 1.55 1.22 -0.2 -0.21 -0.46 -0.53 -0.36 -0.46
KNA54902 (VCV51_033130)
 -1.43 -0.8 -3.01 -1.84 0.33 0.99 0.73 0.39 -0.62 1.7 0.15 -0.1 1.16 -0.34 -1.11 -0.69 -0.53 0.45 0.26 -0.68 -0.81 -0.61 -1.75
KNA54903 (VCV51_031793)
 -1.06 -0.15 -2.41 -1.36 -0.64 0.06 -0.23 -0.52 -0.93 1.02 0.3 0.46 0.88 0.45 -0.02 -0.14 0.05 1.33 1.2 -1.11 -1.35 -0.91 -1.71
KNA54912 (VCV51_033135)
 -2.73 -1.52 -4.88 -3.09 0.96 1.68 1.44 0.81 -1.84 2.04 -0.8 -0.74 1.78 -1.07 -0.04 -1.08 -0.95 -1.87 -2.09 -1.91 -2.13 -2.02 -4.07
KNA54913 (GroL)
 -2.77 -1.67 -3.7 -2.93 0.46 1.34 1.14 0.23 -2.59 2.15 -1.07 0.43 1.81 -1.31 0.4 -0.09 -0.05 -0.96 -1.22 -2.92 -3.05 -2.75 -3.05
KNA54922 (VCV51_033138)
 0.06 0.18 -1.78 -0.86 0.11 0.44 0.37 0.14 -0.11 0.33 0.47 0.15 0.29 0.08 -0.78 0.19 0.5 -0.91 -0.82 -0.08 -0.31 0.32 -0.09
KNA54923 (SecB)
 -0.18 -0.84 -1.59 -1.26 0.43 0.79 0.54 0.51 -0.89 0.76 0.85 0.36 0.61 -0.78 0.34 -0.25 -0.08 -0.98 -0.96 -0.87 -0.77 0.0 0.29
KNA54959 (VCV51_031749)
 -0.04 -2.28 -0.65 -0.55 -0.57 -0.13 -0.14 -0.49 -0.87 1.82 0.13 0.66 0.69 -2.1 1.34 -1.17 -0.8 -1.04 -0.86 -1.15 -1.0 -0.95 1.41
KNA55097 (VCV51_031839)
 -0.44 0.01 -2.04 -0.88 -0.57 -0.03 -0.09 -0.49 -1.1 1.29 0.67 0.89 0.75 0.12 1.51 -0.69 -0.73 -0.17 -0.21 -1.37 -1.06 -0.91 -0.28
KNA55098 (VCV51_031838)
 -0.44 0.99 -2.26 -1.2 0.11 0.33 0.26 0.13 -0.18 0.47 0.34 0.26 0.12 0.95 0.26 -0.21 0.01 -0.67 -0.79 -0.41 -0.11 0.06 -1.97
KNA55680 (VCV51_033023)
 -0.04 -3.29 -0.23 -0.54 0.21 0.5 0.17 0.26 -0.58 1.02 -1.05 -0.14 0.32 -3.19 -2.06 1.36 1.16 0.02 -0.03 -0.45 -0.42 -0.38 -0.39
KNA55695 (VCV51_031006)
 -0.63 0.58 -1.2 -1.0 -0.89 -0.57 -0.71 -0.91 -0.37 0.37 -0.25 0.59 0.18 0.47 -2.37 0.68 0.42 1.28 0.99 -0.43 -0.6 -0.26 -0.22
KNA55696 (VCV51_031007)
 -1.28 0.97 -2.05 -1.53 -0.05 0.43 0.2 0.11 -1.36 0.93 0.56 1.46 0.37 1.02 -2.26 -0.03 -0.55 0.15 0.3 -1.59 -1.89 -1.41 -1.08
KNA55697 (VCV51_031008)
 -1.9 0.6 -2.75 -2.48 0.75 1.19 0.98 0.93 -1.78 0.64 0.44 0.84 0.34 0.71 0.36 -0.3 -0.73 -0.95 -0.99 -1.98 -2.1 -1.9 -0.53
KNA55700 (VCV51_033027)
 -0.78 -1.52 -0.98 -1.06 -0.04 0.8 0.51 0.09 0.25 1.1 -0.9 -0.05 0.37 -1.55 -0.29 -0.33 -0.55 0.83 0.82 -0.03 -0.17 -0.03 -0.47
KNA55705 (VCV51_031013)
 -0.61 -0.7 -0.05 -0.77 0.09 0.42 0.24 -0.0 -1.21 0.4 -0.17 0.44 0.31 -0.67 0.4 0.05 -0.18 1.17 1.0 -0.87 -0.92 -1.07 -0.53
KNA56145 (VCV51_032985)
 0.06 -1.75 -1.83 -0.27 -0.82 -0.13 -0.41 -0.86 -0.17 1.23 -0.62 0.21 0.76 -1.36 -0.2 0.92 0.76 0.27 0.16 -0.28 -0.72 0.05 0.48
KNA56277 (VCV51_032900)
 -1.01 -0.42 -1.89 -1.34 0.32 0.53 0.28 0.34 -0.57 0.33 -0.38 0.16 -0.27 0.43 -0.67 1.1 0.93 0.13 0.09 -0.56 -0.62 -0.26 -0.12
KNA56278 (VCV51_030596)
 -1.85 -1.62 -3.74 -2.32 0.44 1.22 0.99 0.48 -1.16 1.51 -0.54 0.04 0.96 -0.97 -1.32 1.35 0.42 -0.59 -0.59 -1.35 -1.38 -0.8 -0.68
KNA56413 (VCV51_030684)
 -0.57 -0.71 -3.81 -0.71 0.43 0.7 0.53 0.15 -0.02 1.22 0.55 -1.02 1.05 -0.2 -2.07 0.27 -0.02 0.14 -0.09 -0.15 -0.41 -0.45 -1.22
KNA56420 (VCV51_030689)
 -2.92 -1.03 -4.13 -3.21 1.18 1.84 1.59 1.01 -2.8 1.16 -1.17 -0.26 1.09 -0.36 -0.01 0.04 -0.4 -0.4 -0.49 -2.92 -2.94 -3.1 -3.01
KNA56847 (VCV51_032859)
 -1.67 -0.53 -0.95 -1.96 0.45 0.5 0.53 0.43 -1.4 0.34 -0.29 -0.17 0.23 -0.62 -0.81 0.57 0.71 1.16 1.27 -1.41 -1.35 -1.67 0.07
KNA56854 (VCV51_030491)
 -0.08 0.17 -1.35 -0.88 0.63 0.82 0.6 0.56 -1.34 0.76 0.38 -0.1 0.56 0.16 -0.95 0.4 0.43 -1.37 -1.27 -1.11 -0.54 -0.61 -0.02
KNA56912 (VCV51_032867)
 -0.1 -2.32 -0.75 -0.27 -2.25 -1.94 -1.83 -2.54 0.29 1.38 -1.1 0.16 1.15 -1.85 -1.31 0.89 1.09 -1.35 -1.53 0.32 0.47 0.52 1.27
KNA56954 (VCV51_030577)
 -0.86 -0.48 -1.45 -1.26 1.24 0.86 1.08 0.91 -0.31 0.42 -0.82 0.39 0.16 -0.56 0.94 -1.52 -1.74 -0.55 -0.35 -0.64 -0.54 -0.43 -0.19
KNA56955 (VCV51_030578)
 -0.26 -1.41 -1.26 -0.41 1.05 0.83 0.95 0.67 -0.84 1.04 -0.68 -0.15 0.68 -1.57 0.67 -0.61 -0.87 -0.26 -0.22 -0.76 -0.86 -0.86 -0.02
KNA56959 (GrpE)
 -2.16 -1.06 -3.16 -2.48 1.29 1.67 1.45 1.24 -1.66 1.15 -0.5 -0.43 0.74 -0.75 -0.86 -0.24 -0.6 -0.33 -0.45 -1.57 -1.74 -1.68 -1.05
KNA56960 (DnaK)
 -1.26 -0.79 -3.55 -1.52 -0.09 0.78 0.47 0.01 -0.81 1.21 -0.16 -0.21 1.05 -0.19 -0.41 0.22 -0.08 1.3 0.9 -0.91 -1.05 -0.85 -2.59
KNA56961 (DnaJ)
 -0.96 -0.72 -2.28 -1.3 -0.15 0.32 0.19 -0.33 -2.02 1.06 -0.03 0.47 1.06 -0.04 -0.1 0.14 -0.29 1.54 1.33 -1.93 -1.99 -1.57 -1.75
KNA57481 (ClpB)
 -1.4 -1.82 -3.02 -1.3 -0.48 0.38 0.1 -0.49 -1.74 1.41 -1.26 -0.25 1.34 -1.27 -1.5 0.48 0.6 1.88 1.51 -1.76 -1.94 -1.74 -2.42
KNA59402 (VCV51_032581)
 -1.29 -0.38 -2.51 -1.71 0.36 0.86 0.66 0.28 -1.3 1.15 0.22 0.47 0.8 0.18 0.0 0.46 0.08 0.25 0.22 -1.47 -1.63 -1.18 -1.04
KNA59420 (VCV51_031285)
 -0.87 -0.45 -2.9 -1.17 -0.2 0.15 -0.08 -0.11 -0.59 1.4 0.5 0.28 1.16 0.08 -1.01 0.97 0.72 -0.12 -0.36 -0.72 -0.92 -0.76 -0.92
KNA59763 (VCV51_032458)
 -3.07 -6.15 -1.55 -3.0 0.66 1.63 1.49 0.1 -3.93 1.95 -5.5 -2.11 1.89 -5.1 0.39 0.83 0.66 -1.01 -1.4 -3.66 -3.91 -3.81 -2.63
KNA59764 (GroL)
 -4.43 -2.83 -4.56 -4.56 -0.21 1.12 1.07 -0.67 -4.05 2.38 -4.87 -0.97 2.22 -2.12 1.51 0.37 0.52 -1.93 -2.3 -4.07 -4.03 -3.96 -3.75
KNA59765 (VCV51_032460)
 -4.44 -2.1 -4.42 -4.87 0.2 1.34 1.27 -0.22 -3.8 2.23 -4.53 -1.64 2.14 -1.11 1.86 -0.56 -0.37 -2.31 -2.61 -3.84 -4.21 -3.88 -4.15
KNA59817 (VCV51_032499)
 -2.1 -1.61 -3.47 -2.34 1.26 1.99 1.46 1.45 -1.16 0.86 -0.91 -0.45 0.5 -1.35 -0.51 -0.91 -0.8 -0.14 -0.62 -1.18 -1.33 -1.27 -1.62
KNA59902 (VCV51_032313)
 -1.21 -0.76 -1.17 -1.96 1.0 1.07 1.01 1.12 -0.6 0.36 -1.08 0.6 0.45 -0.91 1.0 -1.42 -0.83 -0.17 -0.18 -0.8 -0.9 -0.72 -0.44
KNA60001 (VCV51_032413)
 -1.13 -1.15 -3.01 -1.46 -3.47 -3.05 -3.05 -3.4 -0.57 2.35 0.42 0.3 1.78 -1.43 1.74 -1.19 -1.19 -2.51 -2.59 -0.46 -0.32 -0.09 1.0
KNA60002 (VCV51_032414)
 -0.66 -2.11 -2.11 -0.73 -10.25 -8.97 -8.6 -8.77 -0.53 2.4 0.22 0.16 1.78 -2.49 1.34 -1.18 -1.18 -2.09 -2.28 -0.43 -0.31 -0.15 1.64
KNA60782 (VCV51_032044)
 -0.68 -0.11 -2.52 -0.93 -0.48 -0.63 -0.69 -0.56 -0.55 -0.31 1.32 0.47 -0.26 -0.39 -0.35 -0.84 -0.25 1.74 1.25 -0.68 -0.66 -0.42 0.28
KNA60937 (VCV51_031911)
 -1.43 -0.69 -0.21 -1.47 0.26 0.11 -0.14 0.18 -1.3 2.19 0.09 0.25 1.18 -0.44 0.01 -0.29 -0.08 -1.25 -1.21 -1.31 -1.61 -1.41 0.58

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.