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Heatmap: Cluster_3 (HCCA)

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(Showing raw values)

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Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA48019 (VCV51_030116)
 15.57 11.6 4.46 7.2 10.71 9.37 11.31 9.64 15.42 11.96 24.88 21.5 12.47 11.68 17.29 21.93 26.39 9.78 11.22 13.73 18.74 19.0 15.65
KNA49512 (VCV51_030313)
 4.67 3.41 2.44 3.29 21.26 16.63 20.21 19.76 4.97 5.66 13.52 13.65 5.8 3.84 21.85 13.0 12.97 16.09 10.85 5.28 5.47 6.05 7.18
KNA49513 (VCV51_030314)
 4.25 2.63 1.34 3.54 49.96 33.84 43.63 32.53 4.69 17.8 85.94 201.95 14.46 2.8 289.42 10.61 15.58 7.91 7.89 4.81 4.81 5.1 5.14
KNA49655 (VCV51_030211)
 1.74 1.4 1.73 1.59 4.44 2.84 5.0 4.95 1.8 2.56 12.9 6.46 1.88 1.69 7.52 2.89 4.08 7.64 8.04 2.02 1.81 2.42 3.8
KNA49656 (VCV51_030212)
 3.73 3.64 2.45 2.6 118.09 50.15 95.32 127.32 4.14 5.59 188.54 32.75 3.9 3.77 23.29 8.99 9.66 9.25 9.34 5.15 4.57 5.16 6.4
KNA52473 (VCV51_030135)
 6.58 8.49 2.85 4.53 48.7 23.82 37.33 51.42 9.39 8.91 59.79 12.17 8.17 8.51 45.66 17.67 20.22 41.28 18.25 11.33 11.04 12.18 11.13
KNA52474 (VCV51_030136)
 4.39 13.82 1.95 3.6 280.39 95.4 128.99 324.16 11.29 4.22 245.98 24.25 3.52 14.18 269.07 8.77 8.28 85.3 22.64 14.91 10.53 16.39 4.18
KNA52475 (VCV51_030137)
 3.44 4.21 2.36 2.42 29.86 12.81 18.61 29.85 3.8 6.0 62.72 11.06 4.4 4.54 96.9 7.32 9.56 32.4 14.69 3.46 3.61 4.87 5.41
KNA52476 (VCV51_030138)
 1.62 2.73 1.27 1.35 32.89 14.26 21.4 35.57 2.06 3.98 38.29 6.39 3.11 2.83 51.89 5.92 6.05 17.55 8.34 2.34 2.36 3.16 2.02
KNA52477 (VCV51_030139)
 3.96 2.11 2.63 2.59 20.27 8.65 13.7 20.88 3.09 5.03 19.27 10.19 3.93 2.29 52.65 8.36 9.6 14.99 11.48 3.04 3.2 3.42 5.33
KNA52731 (VCV51_031545)
 3.84 1.14 17.32 3.78 4.53 2.32 2.4 4.2 3.48 2.59 0.5 42.04 2.42 0.99 40.69 2.29 2.39 4.85 4.53 2.74 2.79 2.54 9.35
KNA53592 (VCV51_030070)
 13.36 5.46 8.36 18.71 49.89 38.63 51.12 46.76 31.25 8.03 37.03 32.1 6.66 5.85 132.25 22.62 22.21 21.25 14.62 23.16 15.28 22.99 40.94
KNA54650 (VCV51_033221)
 11.08 42.04 2.63 5.46 2.11 2.47 2.41 1.68 27.2 13.48 35.45 22.75 15.5 33.39 24.09 8.64 6.7 5.39 6.2 16.98 64.56 37.8 18.71
KNA54892 (VCV51_033127)
 290.37 1463.38 446.9 275.09 823.72 678.78 696.98 743.51 577.68 396.93 1328.26 878.41 520.12 1661.08 933.4 800.24 979.58 1039.18 1018.15 556.98 453.91 543.53 490.51
KNA54960 (VCV51_031748)
 31.46 39.62 18.94 25.32 36.98 28.26 28.22 32.56 11.54 29.05 90.17 18.66 42.75 34.15 87.96 13.75 19.17 46.36 42.56 19.68 11.43 14.72 64.76
KNA55028 (VCV51_031712)
 135.39 276.65 104.31 90.26 225.32 214.62 220.42 217.6 196.83 144.15 256.99 232.22 143.11 268.61 218.7 248.7 205.86 301.28 316.1 184.57 210.51 192.21 222.82
KNA55047 (VCV51_033196)
 347.75 480.53 125.11 320.32 419.1 419.38 459.96 422.68 162.63 208.57 742.34 206.78 352.27 483.51 325.7 392.98 300.76 437.86 380.77 191.07 291.73 150.0 447.55
KNA55641 (VCV51_030958)
 95.98 65.25 7.95 68.14 39.04 38.67 46.98 34.94 81.92 38.76 113.1 82.23 71.04 63.63 79.05 91.7 100.76 60.11 53.3 69.89 37.91 72.37 51.41
KNA55656 (VCV51_033019)
 6.24 13.93 3.12 3.32 10.07 10.98 8.63 10.24 11.23 23.18 147.71 133.39 56.05 16.24 25.19 7.73 6.6 0.65 0.87 6.64 3.33 5.12 10.78
KNA55701 (VCV51_033028)
 44.5 28.18 14.37 37.74 29.96 23.79 28.12 29.49 51.75 32.33 34.03 57.68 23.39 25.18 109.29 30.05 24.78 47.24 52.36 43.35 43.38 45.99 62.03
KNA56005 (VCV51_033003)
 18.37 25.4 14.27 14.38 33.58 39.61 41.87 35.16 20.4 42.35 49.74 86.92 29.28 18.13 157.09 31.85 19.84 16.72 16.7 18.14 17.08 22.1 25.25
KNA56300 (VCV51_030620)
 40.13 272.77 13.87 51.74 10.26 13.18 13.09 7.27 43.16 86.98 649.88 183.94 42.53 251.64 4.9 48.94 51.24 16.94 18.14 35.99 27.07 33.53 38.94
KNA56301 (VCV51_030621)
 13.71 240.22 9.33 16.27 5.6 6.75 7.05 4.67 12.85 25.85 423.16 122.89 13.71 222.66 5.86 27.47 30.66 15.48 15.14 10.22 8.23 9.87 17.14
KNA56884 (VCV51_030519)
 5.1 3.32 2.59 3.95 19.74 11.28 18.55 12.84 5.08 3.9 7.3 7.31 3.38 2.98 6.53 7.52 8.24 10.53 10.56 5.28 5.33 6.24 5.8
KNA56891 (VCV51_030526)
 19.64 3.31 13.83 15.32 46.32 34.1 39.64 36.16 11.09 16.24 8.96 17.03 11.28 3.25 14.52 33.5 39.7 56.45 46.01 10.9 10.81 13.16 33.41
KNA57842 (VCV51_032812)
 4.3 5.44 1.96 2.97 3.7 3.09 3.27 3.5 4.89 3.29 7.52 19.06 2.7 7.15 1.7 5.43 4.71 10.29 10.81 4.18 4.59 5.03 6.78
KNA57843 (VCV51_032813)
 3.02 6.06 1.41 2.34 4.66 3.54 3.09 5.53 5.89 2.08 9.45 20.07 1.35 9.01 0.9 5.83 4.41 8.28 7.79 5.12 5.43 5.07 4.68
KNA57844 (VCV51_032814)
 19.89 76.98 11.12 11.87 211.76 128.71 81.63 254.66 42.65 25.25 210.99 407.65 18.1 128.38 0.0 60.16 39.04 87.22 82.84 37.2 45.96 43.21 99.04
KNA57845 (VCV51_032815)
 8.25 21.89 4.5 5.07 77.12 47.08 28.07 95.13 11.4 12.13 130.68 302.84 7.02 32.66 0.0 40.91 26.22 28.64 27.37 10.21 10.33 10.97 67.04
KNA57850 (VCV51_032774)
 13.12 6.81 8.68 9.9 3.28 3.02 2.95 2.59 29.07 11.32 95.37 36.27 11.68 16.78 19.16 39.88 16.95 4.76 4.6 23.9 18.41 28.96 28.43
KNA57851 (VCV51_032775)
 14.82 9.03 7.9 10.94 3.93 3.94 4.4 3.64 21.7 12.22 132.69 45.81 13.79 18.61 24.34 46.98 19.53 9.24 9.42 19.73 17.66 22.34 22.94
KNA57852 (VCV51_032776)
 18.16 7.9 13.13 15.17 9.28 9.21 9.59 8.77 22.85 12.5 71.55 33.2 12.52 14.79 14.04 47.54 27.17 10.92 11.81 22.99 21.61 22.74 24.96
KNA58561 (VCV51_032728)
 33.18 6.37 13.97 18.05 13.83 12.77 11.74 13.13 29.01 15.67 57.69 23.53 12.76 7.28 17.56 24.93 20.37 15.53 17.82 23.2 26.75 47.53 28.4
KNA58617 (VCV51_031094)
 0.0 0.03 0.0 0.02 0.0 0.0 0.0 0.0 0.01 0.0 0.03 0.05 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0
KNA59814 (VCV51_032497)
 5.07 10.16 1.77 3.72 21.95 19.2 23.94 16.88 6.17 24.19 16.95 24.4 22.87 9.83 99.52 15.19 21.98 7.15 8.39 6.47 5.52 5.33 15.89
KNA59826 (VCV51_032503)
 97.16 0.0 15.57 47.43 46.41 36.15 34.33 52.42 0.0 3.8 89.48 0.0 4.18 0.0 17.53 0.0 0.0 18.49 16.45 0.0 0.0 0.0 0.0
KNA60692 (VCV51_032131)
 24.18 14.78 4.45 21.13 21.53 22.63 24.23 20.04 19.84 32.27 38.81 22.62 19.64 16.91 32.87 9.72 12.17 30.91 24.59 21.93 21.16 23.74 12.11
KNA60719 (VCV51_032158)
 14.68 7.01 9.19 16.6 18.98 17.12 21.04 15.69 24.04 9.66 41.68 22.29 11.01 6.72 58.14 9.81 17.71 17.99 18.46 23.93 23.29 22.48 12.51
KNA60720 (VCV51_032159)
 2.79 1.3 1.3 2.41 6.0 3.31 5.66 5.14 2.66 4.47 31.21 15.3 4.32 1.3 17.7 3.07 4.64 6.86 7.31 3.05 2.43 2.9 2.59
KNA60721 (VCV51_032160)
 3.02 1.81 1.62 2.15 8.35 4.54 6.94 6.68 3.45 3.88 28.46 14.01 3.63 2.06 15.61 3.83 5.79 6.58 6.66 4.16 3.3 3.76 4.48
KNA60722 (VCV51_032161)
 4.63 1.24 2.29 4.39 9.61 5.59 8.12 7.82 4.99 3.83 38.23 18.26 2.96 1.6 22.97 2.78 4.23 6.04 5.83 4.74 4.15 5.11 5.94
KNA60835 (VCV51_032025)
 68.22 13.87 25.95 61.65 275.14 190.36 216.75 235.43 137.02 30.71 28.61 48.3 25.59 15.62 56.26 41.44 72.39 41.12 21.93 92.08 80.14 105.37 57.2
KNA60900 (VCV51_031874)
 0.79 0.0 1.36 0.0 1.32 1.13 2.69 1.62 0.0 0.43 4.13 0.0 1.08 0.0 1.27 0.0 0.0 1.31 0.85 0.15 0.0 0.0 0.0
KNA60951 (VCV51_031926)
 3.23 3.44 1.73 2.94 12.49 7.02 11.47 12.99 4.68 3.17 8.21 4.37 1.96 3.55 11.24 2.76 3.94 3.2 3.09 4.68 5.2 4.85 3.65
KNA60978 (VCV51_031953)
 8.82 2.39 2.42 7.56 3.79 4.56 4.33 3.07 10.82 15.73 53.7 8.88 7.15 2.07 107.94 3.52 5.06 4.16 4.72 10.88 13.66 12.15 18.04
KNA60980 (VCV51_031955)
 6.1 8.75 2.67 4.29 5.44 5.39 5.92 4.83 9.24 9.04 78.69 10.83 5.3 9.09 93.43 7.15 8.92 23.2 25.78 8.6 8.62 9.98 11.55
KNA60981 (VCV51_031956)
 11.52 7.08 18.71 9.76 10.08 11.88 11.93 8.13 10.81 41.93 54.54 22.76 22.48 6.78 81.63 12.13 14.95 15.08 15.16 11.11 11.46 13.73 26.88
KNA60992 (NapF)
 55.15 7.58 9.64 52.84 10.93 19.72 20.42 13.85 124.2 13.77 87.11 84.72 9.97 8.59 166.89 8.18 6.34 14.75 15.39 68.73 154.85 119.64 16.86
KNA60993 (VCV51_031968)
 60.64 22.79 6.71 42.0 14.85 16.95 18.29 14.35 154.12 12.67 76.05 80.91 11.2 25.82 80.55 16.46 15.3 21.79 20.73 80.96 155.8 133.98 7.8
KNA60994 (VCV51_031969)
 28.64 3.04 5.1 26.16 8.36 16.78 14.0 11.06 47.36 11.26 127.45 65.45 7.06 2.87 57.21 13.86 7.78 9.27 9.97 24.32 49.63 35.19 8.32
KNA60995 (VCV51_031970)
 30.33 5.14 6.05 33.66 10.78 18.76 16.84 14.62 38.6 10.41 187.13 56.3 9.09 4.88 56.33 9.66 10.42 12.12 12.7 27.39 46.33 34.65 6.41
KNA60996 (VCV51_031971)
 35.32 2.48 9.18 47.43 10.77 18.97 16.07 12.19 37.13 10.48 125.11 45.15 7.13 2.19 64.17 18.59 18.65 11.78 13.5 30.22 37.98 29.05 21.89
KNA61016 (VCV51_031991)
 1.02 0.0 0.0 2.15 5.67 2.58 1.44 2.57 0.0 3.65 10.33 0.0 0.0 0.0 5.79 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)