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View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | 0.02% arabinose,A1552 | 0.5mM indole,N16961 | 37C,C6706 | arabinose-,A1552 | E-exponential,5uM AI-2,C6706 | E-exponential,5uM CAI-1,C6706 | E-exponential,5uM DPO,C6706 | E-exponential,Water,C6706 | empty Tn | E-stationary,0.2% L-arabinose,C6706 | LB(2% NaCl),30C,N16961 | LB,C7258 | Log,0.2% L-arabinose,C6706 | Methanol,N16961 | O395 | Polymyxin,C6706 | Polymyxin,VC1639 | riboflavin-,N16961 | riboflavin+,N16961 | TnqstR | TntfoY | TntoX-strep | Water,Rich,N16961 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KNA47629 (VCV51_033875) | -4.31 | 3.03 | -3.94 | -2.45 | -11.15 | -17.27 | -17.91 | - | -4.95 | -29.91 | -20.3 | 0.38 | -15.83 | 3.69 | -2.3 | -7.54 | -19.82 | -32.58 | -28.9 | -18.58 | -3.85 | -12.41 | - |
KNA47894 (VCV51_033874) | -4.03 | 2.1 | -2.19 | -4.87 | -3.23 | -5.09 | -5.21 | -3.25 | -0.27 | -7.5 | 0.13 | -0.9 | -6.48 | 1.8 | -1.09 | 1.74 | 2.0 | -0.3 | -0.38 | -0.34 | -0.46 | -0.35 | -1.15 |
KNA49490 (VCV51_030298) | -1.55 | 0.24 | -2.24 | -2.37 | 0.55 | 0.63 | 0.64 | 0.6 | -1.08 | -0.6 | 0.67 | 0.78 | -0.62 | 0.03 | 0.8 | -0.65 | -0.69 | 1.28 | 0.68 | -1.21 | -1.06 | -0.96 | -1.23 |
KNA49652 (VCV51_030208) | -5.18 | 3.76 | -5.27 | -5.33 | -4.81 | -4.83 | -4.88 | -4.84 | -5.1 | -4.27 | -4.81 | -4.28 | -4.59 | 3.0 | -4.18 | -3.79 | -3.46 | -3.72 | -3.51 | -5.18 | -5.09 | -5.21 | -0.86 |
KNA49653 (VCV51_030209) | -6.69 | 3.78 | -7.76 | -7.4 | -7.38 | -7.26 | -7.08 | -7.7 | -6.57 | -6.45 | -6.57 | -6.56 | -6.87 | 3.16 | -4.97 | -5.55 | -5.44 | -5.34 | -5.31 | -6.61 | -6.53 | -6.67 | -4.91 |
KNA51532 (VCV51_033572) | -0.02 | 2.53 | -1.95 | 0.04 | -2.02 | -1.0 | -1.61 | -1.67 | -0.44 | -0.51 | -0.36 | -0.66 | -1.28 | 1.86 | 0.88 | -2.09 | -1.5 | -0.38 | -0.39 | -0.48 | -0.73 | -0.69 | -0.42 |
KNA52279 (VCV51_033445) | -0.37 | -0.02 | -1.15 | -0.51 | -0.54 | -0.34 | -0.34 | -0.29 | 0.38 | -0.7 | -0.2 | 0.37 | -0.77 | 0.02 | 1.55 | -0.58 | -0.36 | 0.33 | 0.31 | 0.14 | -0.06 | 0.49 | -0.03 |
KNA53608 (VCV51_033300) | -0.41 | 1.15 | -0.17 | -0.6 | -0.7 | -0.69 | -0.64 | -0.74 | -0.13 | -0.8 | 0.64 | 0.44 | -0.97 | 1.25 | 0.6 | 0.04 | 0.26 | 0.1 | -0.07 | -0.61 | -0.88 | -0.07 | -0.34 |
KNA53859 (VCV51_030796) | -0.85 | 1.72 | -2.31 | -1.1 | 0.72 | -0.09 | 0.48 | 0.81 | 0.32 | -1.01 | -0.62 | -0.45 | -1.66 | 1.62 | -0.72 | -1.03 | -1.17 | -0.54 | -0.55 | -0.05 | -0.35 | 0.16 | -1.17 |
KNA55084 (VCV51_031849) | -1.39 | 2.41 | -3.28 | -1.59 | -1.55 | -1.71 | -1.41 | -1.53 | -0.76 | -0.72 | 0.58 | 0.76 | -0.26 | 2.22 | -0.15 | -0.97 | -0.57 | -0.89 | -0.82 | -0.93 | -0.62 | -0.89 | -0.48 |
KNA55289 (VCV51_033102) | -1.05 | 1.71 | -0.98 | -1.79 | -0.41 | -0.46 | -0.45 | -0.41 | -0.72 | -2.13 | 0.17 | -0.12 | -1.76 | 1.98 | -0.77 | 0.74 | 0.38 | 0.14 | 0.26 | -0.74 | -0.62 | -0.59 | -0.76 |
KNA55993 (VCV51_030911) | -1.5 | -0.57 | -1.96 | -2.19 | 1.06 | 0.94 | 1.09 | 1.05 | -1.3 | -2.06 | 1.04 | 1.18 | -2.43 | -0.89 | 1.52 | -0.84 | -1.33 | 0.43 | -0.07 | -1.57 | -1.57 | -1.27 | -1.29 |
KNA56275 (VCV51_032898) | -1.65 | 1.71 | -2.98 | -2.49 | 0.04 | -0.43 | -0.11 | -0.12 | -0.09 | -0.59 | 0.83 | 0.07 | -0.53 | 2.01 | -0.81 | -0.63 | -1.13 | -0.55 | -0.35 | -0.38 | -0.29 | 0.14 | -1.01 |
KNA56859 (IscR) | -0.98 | 0.54 | 0.72 | -1.57 | 0.46 | 0.22 | 0.47 | 0.11 | 0.88 | -1.56 | -1.04 | 0.37 | -2.12 | 0.34 | -0.4 | -1.01 | -0.82 | -0.04 | 0.04 | 0.3 | 0.09 | 0.79 | -0.42 |
KNA56860 (IscS) | -1.63 | -0.09 | -0.02 | -2.12 | 0.76 | 0.87 | 1.06 | 0.74 | -0.14 | -0.57 | -0.56 | 0.63 | -1.1 | -0.35 | 0.74 | -1.03 | -0.99 | 0.51 | 0.35 | -0.54 | -0.67 | -0.23 | -0.59 |
KNA56861 (VCV51_030498) | -1.32 | -0.82 | 0.48 | -1.69 | 0.94 | 0.96 | 1.07 | 0.92 | -0.69 | -0.56 | -0.56 | 0.15 | -1.05 | -1.11 | 0.63 | -0.9 | -0.77 | 1.07 | 0.46 | -0.78 | -0.77 | -0.72 | -0.95 |
KNA56862 (IscA) | -0.55 | 0.17 | 0.52 | -0.82 | 0.62 | 0.64 | 0.66 | 0.61 | 0.03 | -0.52 | -1.08 | -0.5 | -1.05 | 0.25 | -0.4 | -0.59 | -0.47 | 0.88 | 0.16 | 0.0 | -0.03 | 0.03 | -1.68 |
KNA56863 (HscB) | -1.89 | 0.56 | -0.31 | -2.27 | -0.24 | -0.13 | -0.02 | -0.29 | -2.34 | 0.08 | -0.08 | 0.87 | -0.32 | 0.63 | 0.74 | 0.71 | 0.73 | 1.2 | 0.74 | -2.18 | -2.22 | -2.17 | -0.53 |
KNA56864 (HscA) | -1.98 | 0.51 | -0.38 | -2.47 | -0.02 | 0.12 | 0.3 | 0.06 | -1.5 | 0.02 | 0.07 | 0.68 | -0.47 | 0.44 | 0.98 | 0.38 | 0.39 | 1.23 | 0.55 | -1.52 | -1.58 | -1.49 | -1.01 |
KNA56865 (VCV51_032862) | -0.82 | 0.72 | 0.01 | -1.64 | 0.54 | 0.41 | 0.44 | 0.54 | -0.68 | -0.54 | -0.04 | -0.16 | -1.04 | 0.77 | 0.49 | -0.5 | -0.45 | 1.09 | 0.33 | -0.76 | -0.75 | -0.43 | -1.5 |
KNA56933 (VCV51_030557) | -1.99 | 2.75 | -4.72 | -2.47 | -4.04 | -3.72 | -4.06 | -4.41 | -1.83 | -4.19 | -4.11 | 1.03 | -4.49 | 3.41 | -1.04 | -1.56 | -1.18 | -3.49 | -3.43 | -2.08 | -2.15 | -1.84 | -2.12 |
KNA56937 (TcpB) | -5.27 | 2.96 | -7.52 | -5.91 | -5.73 | -5.7 | -5.68 | -6.2 | -4.96 | -5.39 | -4.6 | 0.55 | -5.42 | 3.66 | -0.7 | -4.99 | -4.71 | -4.25 | -4.08 | -5.29 | -5.37 | -4.99 | -4.59 |
KNA56938 (VCV51_032881) | -5.54 | 2.82 | -7.52 | -6.01 | -4.83 | -4.56 | -4.79 | -5.39 | -5.77 | -5.06 | -4.05 | 1.55 | -5.15 | 3.54 | -0.25 | -4.64 | -4.32 | -5.04 | -4.68 | -6.09 | -5.69 | -6.1 | -5.12 |
KNA56939 (VCV51_030562) | -4.68 | 2.78 | -7.16 | -5.34 | -4.62 | -4.49 | -4.62 | -5.11 | -4.86 | -4.74 | -3.92 | 1.43 | -4.66 | 3.59 | -0.9 | -3.23 | -2.97 | -4.21 | -4.02 | -5.17 | -5.07 | -4.82 | -4.78 |
KNA56940 (VCV51_030563) | -6.26 | 2.79 | -8.09 | -6.71 | -5.75 | -5.64 | -5.88 | -5.79 | -6.83 | -6.32 | -4.76 | 0.86 | -6.0 | 3.77 | -2.31 | -3.21 | -2.9 | -5.91 | -6.21 | -6.78 | -7.09 | -6.4 | -6.43 |
KNA56945 (VCV51_030569) | -6.65 | 2.9 | -7.16 | -7.11 | -4.45 | -4.36 | -4.42 | -4.81 | -6.8 | -5.51 | -3.95 | 1.4 | -5.36 | 3.54 | -0.62 | -3.72 | -3.53 | -5.09 | -5.09 | -7.29 | -7.31 | -7.02 | -4.43 |
KNA56946 (VCV51_030570) | -5.83 | 3.04 | -6.8 | -6.4 | -3.7 | -3.73 | -3.62 | -3.68 | -5.68 | -4.15 | -3.32 | 1.47 | -4.89 | 3.34 | 0.04 | -4.1 | -4.19 | -5.6 | -5.33 | -5.7 | -6.42 | -5.84 | -3.81 |
KNA56947 (AcfB) | -5.37 | 3.07 | -6.71 | -6.14 | -4.39 | -4.32 | -4.25 | -4.67 | -5.1 | -4.76 | -3.78 | 0.46 | -5.1 | 3.52 | -0.11 | -3.49 | -3.57 | -4.72 | -4.56 | -5.55 | -5.55 | -5.16 | -3.68 |
KNA58257 (NspC) | -2.78 | 1.83 | -2.64 | -2.43 | 0.17 | 0.19 | -0.61 | -0.01 | -4.56 | -0.08 | -4.33 | -3.83 | -0.47 | 2.41 | 2.26 | -3.18 | -3.46 | -0.14 | -0.33 | -2.04 | -2.02 | -2.03 | -1.08 |
KNA59392 (VCV51_031300) | -0.74 | -1.21 | 0.03 | -1.22 | 1.03 | 1.01 | 1.05 | 0.99 | 0.46 | -0.3 | -0.09 | 0.27 | -1.33 | -1.41 | -0.39 | -0.98 | -1.12 | 0.08 | -0.06 | -0.08 | -0.14 | 0.3 | -1.11 |
KNA59777 (VCV51_032472) | -0.84 | 0.95 | -1.62 | -1.35 | 0.07 | -0.08 | -0.05 | 0.09 | -0.11 | -1.47 | 1.12 | 0.82 | -0.7 | 0.87 | 0.73 | -0.83 | -0.46 | -0.2 | 0.08 | -0.49 | -0.53 | -0.18 | -0.1 |
KNA59778 (VCV51_032473) | -1.24 | 1.26 | -0.36 | -1.19 | -0.84 | -0.92 | -0.92 | -0.69 | 0.9 | -2.49 | 1.15 | 0.72 | -3.44 | 1.28 | 2.02 | -2.09 | -1.51 | -1.35 | -1.34 | -0.25 | -0.68 | 0.04 | -1.37 |
KNA59781 (VCV51_032476) | -2.06 | 1.87 | -1.16 | -1.89 | -0.7 | -1.14 | -0.96 | -0.6 | -0.44 | -2.43 | 1.05 | 0.66 | -2.75 | 1.77 | 1.82 | -1.8 | -1.16 | -0.24 | -0.08 | -1.13 | -1.59 | -1.39 | -0.37 |
KNA59794 (VCV51_032490) | -1.15 | -0.45 | -1.68 | -1.61 | 0.38 | 0.27 | 0.4 | 0.35 | -1.0 | -0.79 | 0.79 | 1.55 | -1.22 | -0.64 | 1.06 | -1.64 | -1.26 | 1.27 | 0.85 | -1.31 | -1.25 | -0.81 | -0.22 |
KNA59815 (VCV51_032498) | -0.66 | -0.43 | -2.02 | -1.2 | -1.53 | -1.22 | -1.27 | -1.43 | 0.95 | -1.16 | -0.56 | 0.88 | -1.3 | -0.46 | 1.78 | -0.38 | 0.28 | 0.13 | -0.11 | 0.76 | 0.24 | 0.94 | 0.17 |
KNA59869 (VCV51_032280) | -0.61 | 0.77 | -1.04 | -0.88 | -0.53 | -0.41 | -0.42 | -0.91 | 0.77 | -1.22 | -1.32 | 1.21 | -1.02 | 1.37 | -1.31 | -0.42 | -0.12 | -0.01 | 0.13 | 0.48 | 0.18 | 0.62 | -0.45 |
KNA59880 (VCV51_032291) | -1.2 | 0.44 | -2.03 | -0.36 | -2.38 | -2.3 | -2.32 | -2.78 | 1.59 | -1.02 | 0.15 | 1.66 | -1.6 | 0.17 | 0.17 | -0.61 | 0.29 | -0.74 | -0.64 | 1.01 | 0.7 | 0.12 | 0.31 |
KNA59907 (VCV51_032318) | -0.68 | 1.06 | -0.88 | -0.7 | -1.29 | -0.8 | -0.71 | -0.7 | 0.35 | 0.13 | -0.2 | 1.15 | -0.81 | 0.47 | 0.75 | -0.68 | 0.28 | -0.95 | -0.99 | 0.41 | -0.05 | 0.26 | 0.57 |
KNA59915 (VCV51_032326) | -0.47 | 0.77 | -1.17 | -0.54 | -0.84 | -0.81 | -0.8 | -0.92 | 0.34 | -0.21 | -0.15 | 0.91 | -0.62 | 0.63 | 0.84 | -0.43 | -0.05 | 0.23 | 0.33 | 0.09 | -0.21 | 0.24 | 0.09 |
KNA59991 (VCV51_032403) | -1.77 | 0.66 | -2.21 | -2.37 | 0.09 | -0.36 | -0.05 | -0.02 | -0.95 | -1.42 | -0.22 | 0.51 | -1.41 | 0.82 | 0.71 | -1.98 | -1.83 | 2.17 | 1.75 | -1.26 | -1.14 | -0.99 | -2.33 |
KNA59992 (VCV51_032404) | -1.68 | 0.11 | -2.23 | -2.1 | -0.05 | -0.19 | -0.0 | 0.04 | -1.04 | -1.31 | 0.04 | 0.67 | -1.26 | 0.14 | 1.44 | -1.93 | -1.47 | 1.97 | 1.75 | -1.43 | -1.26 | -1.06 | -1.38 |
KNA59998 (VCV51_032410) | - | - | - | 1.96 | - | - | - | - | - | 1.01 | 1.17 | 2.75 | 1.99 | - | - | - | - | - | - | 0.93 | - | - | 1.17 |
KNA60015 (VCV51_032427) | -0.33 | -0.32 | -1.97 | -1.23 | 0.01 | 0.05 | 0.18 | 0.1 | -0.19 | 1.29 | 0.75 | 1.21 | 0.13 | -0.09 | -0.42 | -1.27 | -0.75 | 0.04 | 0.11 | -0.01 | -0.42 | -0.1 | -0.74 |
KNA60016 (VCV51_032428) | -0.61 | -0.38 | -1.4 | -1.02 | -0.17 | -0.13 | -0.01 | -0.12 | 0.05 | 1.35 | 1.0 | 1.66 | 0.51 | -0.07 | -0.26 | -1.53 | -1.23 | -0.63 | -0.61 | -0.17 | -0.87 | -0.22 | -0.58 |
KNA60686 (VCV51_032125) | -0.85 | 0.86 | -1.36 | -1.1 | -0.83 | -0.86 | -0.67 | -0.95 | 0.39 | -0.93 | -0.19 | 0.69 | -1.01 | 0.8 | 0.93 | 0.07 | 0.54 | -0.43 | -0.16 | 0.42 | -0.12 | 0.21 | 0.59 |
KNA60724 (VCV51_032163) | -0.87 | 0.83 | -0.81 | -0.81 | -0.3 | -0.22 | -0.11 | -0.34 | -0.1 | -0.19 | 0.42 | 0.61 | -0.82 | 0.92 | 1.09 | -0.44 | 0.03 | 0.04 | 0.19 | -0.54 | -0.95 | -0.55 | 0.08 |
KNA60794 (VCV51_032056) | -1.15 | 1.74 | -2.75 | -1.26 | -1.78 | -1.71 | -1.97 | -2.12 | -1.1 | -1.51 | 2.08 | 1.39 | -2.42 | 1.73 | 1.37 | -1.3 | -0.92 | -0.72 | -0.7 | -1.13 | -1.16 | -1.14 | -1.68 |
KNA60928 (VCV51_031902) | 0.01 | 1.24 | -1.42 | -0.34 | -1.78 | -1.75 | -1.77 | -1.81 | 0.2 | -0.93 | 0.8 | 0.68 | -1.47 | 0.99 | 0.54 | -0.5 | 0.01 | 0.18 | 0.25 | 0.08 | -0.11 | 0.22 | 0.36 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.