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Heatmap: Cluster_20 (HCCA)

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Gene
GCGS0457,reduced ceftriaxone suscept
FA1090/H041,60min+PMN
FA1090,L-log,from bact
GCGS1095,reduced ceftriaxone suscept
from N. gon mtr mut mosiac transformant
WT,from L-log cell cultures
from lab,SP319,reduced ceftriaxone suscept
FA1090/H041,0min+PMN
from lab,SP316,reduced ceftriaxone suscept
FA1090cpxR::erm,L-log,from bact
FA1090 GCM77,strain+mut,untreated
GCGS1014,reduced ceftriaxone suscept
from urethra,test for azithromycin resist
FA1090/H041,60min
WT parent,FA19 WT,from p-log cells
WT,FA19,from p-L-log cells
overexp mtrCDE,FA19,from p-L-log cells
FA1090 GCM77,strain+mut,H2O2
FA1090cpxA::kan,L-log,from bact
from p-cells
AKP14102 (thrC)
 160.17 259.87 61.59 156.6 121.65 457.42 146.38 276.67 130.77 34.78 259.81 126.74 217.9 342.55 293.96 436.68 488.54 326.51 51.66 191.33
AKP14133 (pdxH)
 60.79 41.63 49.82 111.95 56.82 152.14 82.72 26.36 83.32 35.87 44.1 48.62 166.26 88.31 354.64 121.95 197.43 42.31 36.79 238.64
AKP14145 (clpX)
 339.64 187.13 183.24 354.6 345.44 344.86 312.37 158.61 357.21 116.37 177.82 325.8 462.55 224.58 603.13 360.63 321.25 211.52 120.76 311.89
AKP14188 (frmA_1)
 58.99 74.01 68.83 127.34 87.84 85.28 113.61 84.83 132.26 33.75 92.06 121.51 178.17 93.21 178.6 68.7 110.15 46.39 37.57 247.03
AKP14196 (clpP)
 585.34 367.7 347.44 417.2 389.13 705.2 424.93 378.11 466.98 591.98 805.55 393.48 275.94 421.31 1101.19 799.86 563.21 544.11 358.45 883.32
AKP14236 (WX61_00147)
 81.44 15.8 0.0 172.91 44.47 176.81 136.02 25.04 182.63 0.0 0.0 181.25 70.63 31.59 111.98 174.94 179.6 0.0 0.0 73.42
AKP14239 (dnaJ_1)
 100.36 70.56 105.67 122.29 140.82 133.91 91.4 52.37 113.88 76.02 181.52 95.14 181.56 100.64 180.82 124.85 147.5 187.68 83.28 147.84
AKP14318 (WX61_00229)
 123.2 8.21 0.0 76.82 0.13 83.36 69.31 13.61 71.94 0.0 0.0 81.19 95.35 7.28 9.51 54.58 126.53 0.0 0.0 0.4
AKP14335 (WX61_00247)
 20.41 16.84 0.35 34.47 30.28 153.71 41.25 18.5 41.8 4.4 10.36 66.38 7.87 31.89 278.65 178.94 115.87 15.11 3.39 58.86
AKP14371 (rpoZ)
 362.91 1297.38 126.6 423.83 405.14 2122.2 342.77 1472.4 348.96 152.43 640.98 268.38 392.45 1728.72 2662.43 2215.33 1982.47 940.89 83.57 1747.78
AKP14417 (sunS)
 149.67 84.37 79.87 131.56 154.87 65.81 113.43 115.33 123.36 47.73 87.4 129.59 216.09 74.61 219.15 69.2 60.73 87.35 59.98 55.44
AKP14422 (thyA)
 159.39 70.2 30.05 141.57 139.67 198.64 131.21 62.39 125.8 34.59 49.14 114.51 104.93 104.95 190.86 203.63 191.15 60.31 27.45 159.69
AKP14438 (WX61_00356)
 317.0 407.09 265.45 416.19 760.46 1202.15 312.73 289.72 280.11 600.19 295.8 383.06 587.37 1322.91 1470.03 961.98 1562.39 269.06 356.76 1103.41
AKP14468 (WX61_00386)
 82.88 42.88 30.01 83.23 83.83 90.24 69.85 49.61 73.39 19.92 37.79 66.54 133.94 69.6 95.48 85.54 97.33 42.04 20.77 51.75
AKP14477 (WX61_00395)
 29.94 23.21 5.45 54.87 53.63 57.4 40.82 31.45 43.19 3.69 26.62 57.82 74.64 66.37 106.81 52.92 64.12 10.51 4.19 189.44
AKP14486 (WX61_00404)
 176.6 50.34 7.5 115.42 60.35 55.78 141.88 50.19 236.08 1.21 49.31 244.29 283.82 38.31 215.18 48.47 66.75 56.27 6.43 1.56
AKP14505 (WX61_00423)
 10.37 4.79 2.09 13.79 7.66 5.82 15.91 6.26 17.74 0.92 2.83 14.42 22.01 5.91 15.2 4.37 8.0 3.9 1.91 3.79
AKP14507 (cmpB)
 11.45 8.78 11.52 23.81 11.96 15.95 22.53 7.22 34.01 4.28 0.8 19.8 42.19 8.89 34.96 15.35 16.84 0.86 10.81 17.36
AKP14588 (tsaC_1)
 304.71 194.64 160.85 219.33 327.64 347.47 211.16 186.0 180.11 115.67 416.94 200.2 416.98 313.61 626.07 364.89 321.33 498.89 144.99 351.56
AKP14615 (rsmH)
 492.48 301.94 228.87 605.39 698.8 584.8 572.61 248.92 565.19 91.63 190.41 521.81 527.77 258.45 852.65 573.26 602.1 280.02 136.17 232.49
AKP14668 (WX61_00589)
 47.43 122.41 94.5 132.92 49.68 252.09 57.76 98.14 56.83 74.97 16.58 151.34 232.62 151.52 239.18 260.27 239.8 18.64 82.2 137.14
AKP14682 (dus)
 237.33 150.26 38.84 345.27 204.99 260.53 322.27 131.49 275.02 35.11 246.74 299.56 568.43 162.72 371.16 230.52 305.54 245.96 26.3 216.81
AKP14712 (rusA_2)
 28.26 14.45 0.45 50.07 5.96 58.71 10.52 9.1 30.52 0.07 5.38 35.87 22.47 10.03 26.72 46.2 77.48 9.52 0.0 0.0
AKP14720 (WX61_00642)
 20.41 16.84 0.35 34.47 30.28 153.71 41.25 18.5 41.8 4.4 10.36 66.38 7.87 31.89 278.65 178.94 115.87 15.11 3.39 58.86
AKP14746 (WX61_00669)
 20.41 16.84 0.35 34.47 30.28 153.71 41.25 18.5 41.8 4.4 10.36 66.38 7.87 31.89 278.65 178.94 115.87 15.11 3.39 58.86
AKP14770 (lrgA)
 128.56 80.8 21.82 230.94 173.93 111.31 153.51 70.2 198.15 23.02 141.78 222.39 450.29 147.42 39.86 85.06 150.67 117.37 15.95 105.45
AKP14812 (epsE_1)
 904.41 730.22 1110.96 758.94 1048.6 1250.41 673.61 525.78 625.62 621.17 876.88 571.03 1166.73 934.18 1840.22 1284.1 1200.0 930.44 1104.53 1155.64
AKP14856 (dsbA_2)
 399.28 329.19 176.07 370.14 369.05 650.14 307.98 252.48 282.31 213.45 629.84 279.3 520.46 753.69 701.72 576.45 760.67 794.16 175.76 277.12
AKP14883 (nuoI)
 93.24 125.9 22.24 138.87 145.95 390.41 113.87 193.32 78.99 324.68 88.77 112.08 59.99 125.89 466.14 372.91 416.66 61.94 13.85 310.17
AKP14907 (thiB)
 167.04 292.37 69.63 187.33 174.16 691.44 131.21 197.49 104.29 113.68 351.84 102.77 177.2 581.42 622.37 662.99 734.11 441.53 105.02 287.43
AKP14990 (pyrH)
 236.92 82.07 51.14 157.17 97.77 141.7 163.69 72.84 141.88 44.75 103.07 153.3 204.55 107.5 68.15 121.3 172.3 125.93 47.29 66.18
AKP14991 (mafA1_3)
 153.43 197.85 0.57 708.21 1.59 322.36 135.11 237.02 175.8 0.7 56.54 505.08 799.76 320.71 367.65 296.89 360.55 74.14 0.55 1560.54
AKP15043 (pgk)
 354.94 313.63 30.28 212.17 226.86 791.4 210.6 253.91 190.57 87.38 509.36 214.44 116.15 649.38 1249.3 709.21 914.67 430.24 41.46 713.04
AKP15047 (waaA)
 44.12 76.72 30.1 115.77 136.32 137.1 76.51 71.87 59.81 19.19 43.09 80.5 348.5 65.47 85.29 141.15 131.01 72.28 53.35 68.66
AKP15060 (dnaJ_2)
 1183.36 377.85 119.54 508.73 604.94 668.53 570.26 446.54 888.01 269.72 357.6 661.38 400.77 553.66 1229.18 696.41 626.69 595.46 136.6 175.62
AKP15102 (rsmD)
 439.66 132.74 158.13 368.15 223.04 369.1 297.93 99.33 278.35 101.41 49.48 315.71 237.38 170.39 604.49 343.49 407.52 55.59 154.87 283.97
AKP15299 (gspA)
 195.19 170.12 20.84 299.11 199.98 292.51 266.17 148.78 259.57 28.65 60.09 207.6 178.26 119.7 389.9 286.43 301.63 58.92 21.95 316.93
AKP15300 (epsE_3)
 98.61 50.25 11.38 101.73 59.5 177.01 121.66 38.9 110.61 15.35 22.87 98.57 58.71 33.48 326.18 191.35 155.5 25.02 12.1 324.4
AKP15338 (pcm)
 191.63 140.49 103.26 212.79 103.01 343.26 158.74 101.59 132.13 117.67 35.59 148.91 332.98 312.63 552.1 335.95 354.2 44.34 108.1 175.58
AKP15469 (htrB_2)
 122.59 70.94 39.05 131.12 98.03 83.63 113.59 99.69 118.18 37.84 61.92 109.4 207.98 54.03 219.4 86.13 79.87 59.96 27.63 27.39
AKP15485 (rpsP)
 6516.2 7799.32 6935.6 4957.82 5002.67 13204.16 5598.92 6199.56 6584.74 7421.84 3428.89 6526.19 12366.5 6323.23 6996.76 12062.53 14916.5 2833.98 5371.12 5773.08
AKP15494 (tatB)
 261.65 221.12 105.0 318.39 313.78 320.78 307.37 183.39 233.83 124.5 132.33 245.39 581.08 187.79 323.94 319.65 322.47 137.96 81.07 215.89
AKP15558 (trpD)
 151.5 110.85 63.36 193.84 101.02 166.1 180.56 79.06 199.29 32.63 56.47 146.44 216.39 154.36 237.49 150.52 189.48 107.53 53.88 292.49
AKP15611 (ampD)
 76.91 67.0 20.49 164.79 101.78 135.44 120.97 63.2 133.16 10.23 121.2 119.67 241.86 110.69 126.32 103.7 183.06 130.26 15.67 76.21
AKP15612 (WX61_01573)
 164.98 90.55 43.61 179.94 146.89 121.7 122.59 119.7 133.21 49.02 55.52 152.29 289.98 79.27 249.05 126.18 114.99 65.3 40.77 65.93
AKP15656 (lptE)
 184.72 138.18 51.64 218.59 139.07 317.01 171.0 135.52 151.78 77.59 111.39 180.92 88.16 230.26 466.92 295.54 349.21 126.42 46.06 253.57
AKP15696 (ubiE)
 247.6 205.84 285.75 190.66 214.75 251.27 171.1 170.41 176.34 140.6 177.98 198.74 272.35 235.46 294.55 248.6 255.26 191.61 257.27 76.01
AKP15733 (WX61_01698)
 137.23 122.19 139.08 178.27 156.02 245.09 175.48 150.7 178.01 77.42 31.04 186.1 61.45 152.16 360.88 237.62 256.29 38.19 95.55 106.22
AKP15796 (WX61_01761)
 346.07 187.12 161.29 424.23 258.09 584.74 543.73 140.66 777.47 38.72 126.91 452.22 239.31 144.34 346.43 637.15 506.23 116.28 75.64 120.2
AKP15818 (ilvA)
 112.1 134.3 130.54 163.38 184.76 144.19 172.75 105.91 174.52 57.14 31.71 149.67 256.26 104.5 199.55 161.36 118.44 32.05 95.79 117.08
AKP15842 (WX61_01812)
 123.2 8.21 0.0 76.82 0.13 83.36 69.31 13.61 71.94 0.0 0.0 81.19 95.35 7.28 9.51 54.58 126.53 0.0 0.0 0.4
AKP15871 (WX61_01841)
 5.0 0.94 0.24 10.08 1.78 7.14 5.29 0.72 4.8 0.17 0.2 5.24 7.16 1.05 5.14 6.01 8.83 0.28 0.13 1.53
AKP15876 (WX61_01846)
 8.15 10.16 6.93 38.53 4.26 20.97 30.63 6.69 31.63 4.28 2.38 20.91 27.24 21.35 9.84 17.82 25.7 3.16 3.71 14.34
AKP15928 (WX61_01898)
 339.08 136.62 108.72 305.28 251.4 293.49 275.61 135.53 277.08 55.36 151.58 243.38 510.67 159.34 368.57 287.88 301.9 227.9 89.08 224.04
AKP15970 (cas1)
 108.06 10.35 0.0 106.03 5.26 86.88 110.5 23.84 108.65 0.0 0.0 90.35 73.07 17.5 184.87 83.97 91.25 0.0 0.0 132.02
AKP15996 (dnaQ)
 93.69 84.32 81.61 184.02 74.85 191.76 161.01 65.07 207.85 41.04 100.5 176.22 187.25 121.83 130.46 177.71 212.83 113.58 52.2 189.43
AKP16000 (yhcR)
 43.56 42.34 36.92 65.29 49.76 63.01 57.65 38.0 84.85 64.45 6.82 70.72 128.27 32.86 56.59 61.9 64.68 6.74 50.01 78.59
AKP16009 (WX61_01982)
 540.01 558.48 54.74 652.8 520.59 1260.33 593.43 328.76 493.47 98.65 243.74 372.97 742.51 1721.06 1639.9 1101.22 1498.97 275.24 53.84 2443.34
AKP16010 (rph)
 140.25 68.9 18.01 161.42 78.17 176.0 157.6 73.44 158.05 15.8 32.73 155.48 120.12 134.97 194.09 146.27 220.58 29.63 13.57 64.82
AKP16084 (ngoMIVR)
 241.1 148.13 15.2 208.09 175.35 318.28 232.19 165.05 265.29 89.56 123.59 220.3 96.75 101.46 310.39 340.29 285.25 115.1 10.12 137.42
AKP16103 (nudF)
 164.19 147.26 144.36 341.94 170.4 241.19 285.39 83.94 268.42 43.71 14.47 195.6 384.19 141.63 359.77 169.47 348.76 19.96 153.76 392.25
AKP16157 (WX61_02133)
 256.04 176.38 27.65 294.16 164.24 579.72 238.62 128.85 302.35 33.71 3.48 233.75 311.02 216.3 141.59 484.09 723.16 3.2 22.32 380.03
AKP16187 (ribC)
 185.42 113.56 98.95 170.42 146.73 206.17 147.38 106.36 145.66 72.06 97.37 151.51 210.51 158.9 264.39 193.45 225.24 99.99 72.63 156.16

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)