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(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | GCGS0457,reduced ceftriaxone suscept | FA1090/H041,60min+PMN | FA1090,L-log,from bact | GCGS1095,reduced ceftriaxone suscept | from N. gon mtr mut mosiac transformant | WT,from L-log cell cultures | from lab,SP319,reduced ceftriaxone suscept | FA1090/H041,0min+PMN | from lab,SP316,reduced ceftriaxone suscept | FA1090cpxR::erm,L-log,from bact | FA1090 GCM77,strain+mut,untreated | GCGS1014,reduced ceftriaxone suscept | from urethra,test for azithromycin resist | FA1090/H041,60min | WT parent,FA19 WT,from p-log cells | WT,FA19,from p-L-log cells | overexp mtrCDE,FA19,from p-L-log cells | FA1090 GCM77,strain+mut,H2O2 | FA1090cpxA::kan,L-log,from bact | from p-cells |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AKP14102 (thrC) | -0.5 | 0.19 | -1.88 | -0.54 | -0.9 | 1.01 | -0.63 | 0.28 | -0.8 | -2.71 | 0.19 | -0.84 | -0.06 | 0.59 | 0.37 | 0.94 | 1.11 | 0.52 | -2.14 | -0.25 |
AKP14133 (pdxH) | -0.75 | -1.29 | -1.03 | 0.13 | -0.84 | 0.58 | -0.3 | -1.95 | -0.29 | -1.51 | -1.21 | -1.07 | 0.7 | -0.21 | 1.8 | 0.26 | 0.95 | -1.27 | -1.47 | 1.23 |
AKP14145 (clpX) | 0.22 | -0.64 | -0.67 | 0.29 | 0.25 | 0.25 | 0.1 | -0.88 | 0.3 | -1.32 | -0.71 | 0.16 | 0.67 | -0.37 | 1.05 | 0.31 | 0.14 | -0.46 | -1.27 | 0.1 |
AKP14188 (frmA_1) | -0.79 | -0.46 | -0.57 | 0.32 | -0.22 | -0.26 | 0.16 | -0.27 | 0.37 | -1.6 | -0.15 | 0.25 | 0.8 | -0.13 | 0.81 | -0.57 | 0.11 | -1.14 | -1.44 | 1.28 |
AKP14196 (clpP) | 0.11 | -0.56 | -0.64 | -0.37 | -0.48 | 0.38 | -0.35 | -0.52 | -0.21 | 0.13 | 0.57 | -0.46 | -0.97 | -0.36 | 1.03 | 0.56 | 0.06 | 0.01 | -0.59 | 0.71 |
AKP14236 (WX61_00147) | -0.03 | -2.39 | - | 1.06 | -0.9 | 1.09 | 0.71 | -1.73 | 1.14 | - | - | 1.13 | -0.23 | -1.39 | 0.43 | 1.08 | 1.11 | - | - | -0.18 |
AKP14239 (dnaJ_1) | -0.28 | -0.79 | -0.21 | 0.0 | 0.21 | 0.14 | -0.42 | -1.22 | -0.1 | -0.68 | 0.57 | -0.36 | 0.57 | -0.28 | 0.57 | 0.03 | 0.27 | 0.62 | -0.55 | 0.28 |
AKP14318 (WX61_00229) | 1.58 | -2.32 | - | 0.9 | -8.3 | 1.02 | 0.75 | -1.59 | 0.81 | - | -20.67 | 0.98 | 1.22 | -2.5 | -2.11 | 0.41 | 1.62 | -17.68 | - | -6.69 |
AKP14335 (WX61_00247) | -1.47 | -1.75 | -7.35 | -0.71 | -0.9 | 1.44 | -0.45 | -1.61 | -0.43 | -3.68 | -2.45 | 0.23 | -2.84 | -0.82 | 2.3 | 1.66 | 1.04 | -1.9 | -4.06 | 0.06 |
AKP14371 (rpoZ) | -1.44 | 0.4 | -2.96 | -1.22 | -1.28 | 1.11 | -1.52 | 0.58 | -1.5 | -2.69 | -0.62 | -1.88 | -1.33 | 0.81 | 1.43 | 1.17 | 1.01 | -0.07 | -3.56 | 0.83 |
AKP14417 (sunS) | 0.49 | -0.33 | -0.41 | 0.31 | 0.54 | -0.69 | 0.09 | 0.12 | 0.22 | -1.15 | -0.28 | 0.29 | 1.02 | -0.51 | 1.04 | -0.62 | -0.81 | -0.28 | -0.83 | -0.94 |
AKP14422 (thyA) | 0.47 | -0.71 | -1.94 | 0.3 | 0.28 | 0.79 | 0.19 | -0.88 | 0.13 | -1.73 | -1.23 | -0.01 | -0.13 | -0.13 | 0.73 | 0.82 | 0.73 | -0.93 | -2.07 | 0.47 |
AKP14438 (WX61_00356) | -1.05 | -0.69 | -1.31 | -0.66 | 0.21 | 0.87 | -1.07 | -1.18 | -1.23 | -0.13 | -1.15 | -0.78 | -0.16 | 1.01 | 1.16 | 0.55 | 1.25 | -1.29 | -0.88 | 0.75 |
AKP14468 (WX61_00386) | 0.32 | -0.63 | -1.14 | 0.33 | 0.34 | 0.44 | 0.07 | -0.42 | 0.15 | -1.74 | -0.81 | 0.0 | 1.01 | 0.07 | 0.53 | 0.37 | 0.55 | -0.66 | -1.67 | -0.36 |
AKP14477 (WX61_00395) | -0.74 | -1.1 | -3.19 | 0.14 | 0.11 | 0.2 | -0.29 | -0.66 | -0.21 | -3.75 | -0.91 | 0.21 | 0.58 | 0.41 | 1.1 | 0.09 | 0.36 | -2.25 | -3.57 | 1.93 |
AKP14486 (WX61_00404) | 0.89 | -0.92 | -3.67 | 0.28 | -0.66 | -0.77 | 0.57 | -0.92 | 1.31 | -6.3 | -0.95 | 1.36 | 1.57 | -1.31 | 1.18 | -0.98 | -0.51 | -0.76 | -3.89 | -5.93 |
AKP14505 (WX61_00423) | 0.31 | -0.81 | -2.0 | 0.72 | -0.13 | -0.53 | 0.92 | -0.42 | 1.08 | -3.18 | -1.57 | 0.78 | 1.39 | -0.5 | 0.86 | -0.94 | -0.07 | -1.1 | -2.13 | -1.14 |
AKP14507 (cmpB) | -0.48 | -0.86 | -0.47 | 0.58 | -0.42 | -0.0 | 0.5 | -1.15 | 1.09 | -1.9 | -4.33 | 0.31 | 1.4 | -0.85 | 1.13 | -0.06 | 0.08 | -4.21 | -0.56 | 0.12 |
AKP14588 (tsaC_1) | 0.05 | -0.6 | -0.88 | -0.43 | 0.15 | 0.24 | -0.48 | -0.67 | -0.71 | -1.35 | 0.5 | -0.56 | 0.5 | 0.09 | 1.08 | 0.31 | 0.12 | 0.76 | -1.03 | 0.25 |
AKP14615 (rsmH) | 0.2 | -0.5 | -0.9 | 0.5 | 0.71 | 0.45 | 0.42 | -0.78 | 0.4 | -2.22 | -1.17 | 0.28 | 0.3 | -0.73 | 0.99 | 0.42 | 0.49 | -0.61 | -1.65 | -0.88 |
AKP14668 (WX61_00589) | -1.41 | -0.04 | -0.41 | 0.08 | -1.34 | 1.0 | -1.12 | -0.36 | -1.15 | -0.75 | -2.92 | 0.27 | 0.89 | 0.27 | 0.93 | 1.05 | 0.93 | -2.76 | -0.61 | 0.12 |
AKP14682 (dus) | 0.02 | -0.64 | -2.59 | 0.56 | -0.19 | 0.16 | 0.46 | -0.83 | 0.23 | -2.73 | 0.08 | 0.36 | 1.28 | -0.52 | 0.67 | -0.02 | 0.39 | 0.07 | -3.15 | -0.11 |
AKP14712 (rusA_2) | 0.36 | -0.61 | -5.61 | 1.18 | -1.89 | 1.41 | -1.07 | -1.28 | 0.47 | -8.25 | -2.04 | 0.7 | 0.02 | -1.14 | 0.27 | 1.06 | 1.81 | -1.21 | - | - |
AKP14720 (WX61_00642) | -1.47 | -1.75 | -7.35 | -0.71 | -0.9 | 1.44 | -0.45 | -1.61 | -0.43 | -3.68 | -2.45 | 0.23 | -2.84 | -0.82 | 2.3 | 1.66 | 1.04 | -1.9 | -4.06 | 0.06 |
AKP14746 (WX61_00669) | -1.47 | -1.75 | -7.35 | -0.71 | -0.9 | 1.44 | -0.45 | -1.61 | -0.43 | -3.68 | -2.45 | 0.23 | -2.84 | -0.82 | 2.3 | 1.66 | 1.04 | -1.9 | -4.06 | 0.06 |
AKP14770 (lrgA) | -0.05 | -0.72 | -2.61 | 0.79 | 0.38 | -0.26 | 0.2 | -0.93 | 0.57 | -2.54 | 0.09 | 0.74 | 1.75 | 0.14 | -1.74 | -0.65 | 0.18 | -0.18 | -3.06 | -0.34 |
AKP14812 (epsE_1) | -0.09 | -0.4 | 0.2 | -0.35 | 0.12 | 0.37 | -0.52 | -0.88 | -0.63 | -0.64 | -0.14 | -0.76 | 0.27 | -0.05 | 0.93 | 0.41 | 0.31 | -0.05 | 0.19 | 0.26 |
AKP14856 (dsbA_2) | -0.14 | -0.42 | -1.32 | -0.25 | -0.26 | 0.56 | -0.52 | -0.8 | -0.64 | -1.05 | 0.51 | -0.66 | 0.24 | 0.77 | 0.67 | 0.39 | 0.79 | 0.85 | -1.33 | -0.67 |
AKP14883 (nuoI) | -0.97 | -0.54 | -3.04 | -0.4 | -0.32 | 1.09 | -0.68 | 0.08 | -1.21 | 0.83 | -1.04 | -0.71 | -1.61 | -0.54 | 1.35 | 1.03 | 1.19 | -1.56 | -3.72 | 0.76 |
AKP14907 (thiB) | -0.89 | -0.08 | -2.15 | -0.73 | -0.83 | 1.16 | -1.24 | -0.65 | -1.57 | -1.45 | 0.18 | -1.59 | -0.81 | 0.91 | 1.01 | 1.1 | 1.24 | 0.51 | -1.56 | -0.11 |
AKP14990 (pyrH) | 1.01 | -0.52 | -1.21 | 0.41 | -0.27 | 0.26 | 0.47 | -0.7 | 0.27 | -1.4 | -0.19 | 0.38 | 0.79 | -0.13 | -0.79 | 0.04 | 0.55 | 0.09 | -1.32 | -0.83 |
AKP14991 (mafA1_3) | -1.03 | -0.67 | -9.12 | 1.17 | -7.63 | 0.04 | -1.22 | -0.4 | -0.84 | -8.81 | -2.47 | 0.69 | 1.35 | 0.03 | 0.23 | -0.08 | 0.2 | -2.08 | -9.15 | 2.31 |
AKP15043 (pgk) | -0.21 | -0.39 | -3.76 | -0.95 | -0.86 | 0.95 | -0.96 | -0.69 | -1.11 | -2.23 | 0.31 | -0.94 | -1.82 | 0.66 | 1.6 | 0.79 | 1.15 | 0.07 | -3.31 | 0.8 |
AKP15047 (waaA) | -1.07 | -0.28 | -1.63 | 0.32 | 0.55 | 0.56 | -0.28 | -0.37 | -0.63 | -2.27 | -1.11 | -0.21 | 1.91 | -0.5 | -0.12 | 0.6 | 0.5 | -0.36 | -0.8 | -0.44 |
AKP15060 (dnaJ_2) | 1.1 | -0.55 | -2.21 | -0.12 | 0.13 | 0.27 | 0.04 | -0.31 | 0.68 | -1.04 | -0.63 | 0.26 | -0.47 | 0.0 | 1.15 | 0.33 | 0.18 | 0.11 | -2.02 | -1.66 |
AKP15102 (rsmD) | 0.79 | -0.94 | -0.69 | 0.53 | -0.19 | 0.54 | 0.23 | -1.36 | 0.13 | -1.33 | -2.36 | 0.31 | -0.1 | -0.58 | 1.25 | 0.43 | 0.68 | -2.19 | -0.72 | 0.16 |
AKP15299 (gspA) | 0.03 | -0.17 | -3.2 | 0.65 | 0.07 | 0.61 | 0.48 | -0.36 | 0.44 | -2.74 | -1.67 | 0.12 | -0.1 | -0.68 | 1.03 | 0.58 | 0.66 | -1.7 | -3.12 | 0.73 |
AKP15300 (epsE_3) | -0.04 | -1.02 | -3.16 | 0.0 | -0.77 | 0.8 | 0.26 | -1.39 | 0.12 | -2.73 | -2.15 | -0.04 | -0.79 | -1.6 | 1.68 | 0.91 | 0.61 | -2.02 | -3.07 | 1.67 |
AKP15338 (pcm) | -0.06 | -0.51 | -0.96 | 0.09 | -0.96 | 0.78 | -0.34 | -0.98 | -0.6 | -0.77 | -2.49 | -0.43 | 0.73 | 0.64 | 1.46 | 0.75 | 0.82 | -2.18 | -0.89 | -0.19 |
AKP15469 (htrB_2) | 0.41 | -0.38 | -1.24 | 0.5 | 0.09 | -0.14 | 0.3 | 0.11 | 0.35 | -1.29 | -0.58 | 0.24 | 1.17 | -0.77 | 1.25 | -0.1 | -0.21 | -0.62 | -1.74 | -1.75 |
AKP15485 (rpsP) | -0.17 | 0.09 | -0.08 | -0.57 | -0.55 | 0.85 | -0.39 | -0.24 | -0.16 | 0.02 | -1.1 | -0.17 | 0.75 | -0.22 | -0.07 | 0.72 | 1.02 | -1.37 | -0.45 | -0.35 |
AKP15494 (tatB) | 0.08 | -0.16 | -1.23 | 0.37 | 0.35 | 0.38 | 0.32 | -0.43 | -0.08 | -0.99 | -0.9 | -0.01 | 1.23 | -0.39 | 0.39 | 0.37 | 0.39 | -0.84 | -1.61 | -0.19 |
AKP15558 (trpD) | 0.07 | -0.38 | -1.19 | 0.43 | -0.51 | 0.2 | 0.32 | -0.87 | 0.47 | -2.14 | -1.35 | 0.02 | 0.59 | 0.1 | 0.72 | 0.06 | 0.39 | -0.42 | -1.42 | 1.02 |
AKP15611 (ampD) | -0.46 | -0.66 | -2.37 | 0.63 | -0.06 | 0.35 | 0.19 | -0.75 | 0.33 | -3.37 | 0.19 | 0.17 | 1.19 | 0.06 | 0.25 | -0.03 | 0.79 | 0.3 | -2.76 | -0.48 |
AKP15612 (WX61_01573) | 0.45 | -0.41 | -1.47 | 0.58 | 0.28 | 0.01 | 0.02 | -0.01 | 0.14 | -1.3 | -1.12 | 0.34 | 1.27 | -0.61 | 1.05 | 0.07 | -0.07 | -0.88 | -1.56 | -0.87 |
AKP15656 (lptE) | -0.02 | -0.43 | -1.85 | 0.23 | -0.42 | 0.76 | -0.13 | -0.46 | -0.3 | -1.27 | -0.74 | -0.05 | -1.08 | 0.3 | 1.32 | 0.66 | 0.9 | -0.56 | -2.02 | 0.44 |
AKP15696 (ubiE) | 0.22 | -0.05 | 0.42 | -0.16 | 0.01 | 0.24 | -0.32 | -0.32 | -0.27 | -0.6 | -0.26 | -0.1 | 0.35 | 0.14 | 0.47 | 0.22 | 0.26 | -0.15 | 0.27 | -1.49 |
AKP15733 (WX61_01698) | -0.17 | -0.34 | -0.15 | 0.21 | 0.02 | 0.67 | 0.19 | -0.03 | 0.21 | -0.99 | -2.31 | 0.27 | -1.33 | -0.02 | 1.23 | 0.62 | 0.73 | -2.01 | -0.69 | -0.54 |
AKP15796 (WX61_01761) | 0.15 | -0.73 | -0.95 | 0.45 | -0.27 | 0.91 | 0.8 | -1.15 | 1.32 | -3.01 | -1.29 | 0.54 | -0.38 | -1.11 | 0.15 | 1.03 | 0.7 | -1.42 | -2.04 | -1.37 |
AKP15818 (ilvA) | -0.24 | 0.02 | -0.02 | 0.3 | 0.48 | 0.12 | 0.38 | -0.32 | 0.4 | -1.21 | -2.06 | 0.18 | 0.95 | -0.34 | 0.59 | 0.29 | -0.16 | -2.05 | -0.47 | -0.18 |
AKP15842 (WX61_01812) | 1.58 | -2.32 | - | 0.9 | -8.3 | 1.02 | 0.75 | -1.59 | 0.81 | - | -20.67 | 0.98 | 1.22 | -2.5 | -2.11 | 0.41 | 1.62 | -17.68 | - | -6.69 |
AKP15871 (WX61_01841) | 0.48 | -1.93 | -3.9 | 1.49 | -1.01 | 0.99 | 0.56 | -2.32 | 0.42 | -4.36 | -4.14 | 0.55 | 1.0 | -1.77 | 0.52 | 0.74 | 1.3 | -3.69 | -4.84 | -1.23 |
AKP15876 (WX61_01846) | -0.92 | -0.6 | -1.16 | 1.32 | -1.86 | 0.44 | 0.99 | -1.21 | 1.04 | -1.85 | -2.7 | 0.44 | 0.82 | 0.47 | -0.65 | 0.21 | 0.74 | -2.29 | -2.06 | -0.11 |
AKP15928 (WX61_01898) | 0.52 | -0.8 | -1.12 | 0.36 | 0.08 | 0.31 | 0.22 | -0.81 | 0.22 | -2.1 | -0.65 | 0.04 | 1.11 | -0.57 | 0.64 | 0.28 | 0.35 | -0.06 | -1.41 | -0.08 |
AKP15970 (cas1) | 0.81 | -2.57 | - | 0.78 | -3.55 | 0.5 | 0.84 | -1.37 | 0.82 | - | - | 0.55 | 0.25 | -1.82 | 1.58 | 0.45 | 0.57 | - | - | 1.1 |
AKP15996 (dnaQ) | -0.5 | -0.65 | -0.7 | 0.48 | -0.82 | 0.53 | 0.28 | -1.02 | 0.65 | -1.69 | -0.4 | 0.41 | 0.5 | -0.12 | -0.02 | 0.43 | 0.69 | -0.22 | -1.34 | 0.52 |
AKP16000 (yhcR) | -0.34 | -0.38 | -0.58 | 0.24 | -0.15 | 0.19 | 0.06 | -0.54 | 0.62 | 0.22 | -3.02 | 0.36 | 1.22 | -0.75 | 0.04 | 0.17 | 0.23 | -3.03 | -0.14 | 0.51 |
AKP16009 (WX61_01982) | -0.49 | -0.44 | -3.79 | -0.22 | -0.55 | 0.73 | -0.36 | -1.21 | -0.62 | -2.95 | -1.64 | -1.03 | -0.03 | 1.18 | 1.11 | 0.54 | 0.98 | -1.46 | -3.82 | 1.69 |
AKP16010 (rph) | 0.38 | -0.65 | -2.58 | 0.58 | -0.47 | 0.7 | 0.55 | -0.56 | 0.55 | -2.77 | -1.72 | 0.53 | 0.15 | 0.32 | 0.85 | 0.44 | 1.03 | -1.87 | -2.99 | -0.74 |
AKP16084 (ngoMIVR) | 0.42 | -0.28 | -3.57 | 0.21 | -0.04 | 0.82 | 0.37 | -0.12 | 0.56 | -1.01 | -0.54 | 0.29 | -0.9 | -0.83 | 0.79 | 0.92 | 0.66 | -0.64 | -4.15 | -0.39 |
AKP16103 (nudF) | -0.31 | -0.47 | -0.5 | 0.75 | -0.26 | 0.24 | 0.49 | -1.28 | 0.4 | -2.22 | -3.81 | -0.06 | 0.92 | -0.52 | 0.82 | -0.26 | 0.78 | -3.35 | -0.4 | 0.95 |
AKP16157 (WX61_02133) | 0.12 | -0.42 | -3.09 | 0.32 | -0.52 | 1.3 | 0.02 | -0.87 | 0.36 | -2.81 | -6.08 | -0.01 | 0.4 | -0.13 | -0.74 | 1.04 | 1.62 | -6.2 | -3.4 | 0.69 |
AKP16187 (ribC) | 0.29 | -0.41 | -0.61 | 0.17 | -0.04 | 0.45 | -0.04 | -0.51 | -0.05 | -1.07 | -0.63 | 0.0 | 0.48 | 0.07 | 0.81 | 0.36 | 0.58 | -0.6 | -1.06 | 0.05 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.