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Heatmap: Cluster_22 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
GCGS0457,reduced ceftriaxone suscept
FA1090/H041,60min+PMN
FA1090,L-log,from bact
GCGS1095,reduced ceftriaxone suscept
from N. gon mtr mut mosiac transformant
WT,from L-log cell cultures
from lab,SP319,reduced ceftriaxone suscept
FA1090/H041,0min+PMN
from lab,SP316,reduced ceftriaxone suscept
FA1090cpxR::erm,L-log,from bact
FA1090 GCM77,strain+mut,untreated
GCGS1014,reduced ceftriaxone suscept
from urethra,test for azithromycin resist
FA1090/H041,60min
WT parent,FA19 WT,from p-log cells
WT,FA19,from p-L-log cells
overexp mtrCDE,FA19,from p-L-log cells
FA1090 GCM77,strain+mut,H2O2
FA1090cpxA::kan,L-log,from bact
from p-cells
AKP14103 (WX61_00014)
 0.3 0.4 -1.43 -0.15 -0.0 0.24 0.11 0.55 -0.07 -2.45 -0.41 -0.31 0.74 0.45 0.2 0.26 0.21 -0.12 -1.81 0.0
AKP14109 (WX61_00020)
 -0.6 0.46 -0.53 0.42 -0.57 0.46 0.33 0.39 -0.1 -1.39 -0.44 -0.35 1.17 -0.12 -0.38 0.5 0.4 -0.51 -1.4 -0.44
AKP14165 (mfd)
 0.33 -0.05 -1.9 0.01 0.07 0.32 -0.05 0.44 -0.23 -3.05 0.05 -0.38 1.4 -0.14 0.26 0.22 0.46 0.19 -2.51 -1.0
AKP14217 (ctpB)
 -0.04 0.16 -1.66 0.4 0.34 0.37 0.14 0.37 -0.06 -1.21 -0.59 -0.23 0.51 0.2 0.64 0.42 0.29 -0.5 -1.93 -0.41
AKP14241 (yabJ)
 0.75 0.16 -2.1 0.44 0.03 0.04 0.52 -0.05 0.53 -2.71 -1.23 0.29 0.74 0.04 0.7 0.14 -0.13 -0.89 -2.54 -0.18
AKP14370 (spoT)
 0.29 0.24 -0.38 0.13 0.26 -0.39 0.06 0.59 -0.06 -0.95 0.05 -0.12 0.45 0.07 0.48 -0.39 -0.39 0.57 -0.93 -1.14
AKP14385 (tag)
 1.05 0.52 -2.38 0.56 0.51 -1.06 0.7 0.88 0.66 -2.41 0.46 0.49 0.44 -0.44 -1.89 -0.89 -1.36 0.43 -3.42 -2.64
AKP14571 (rlmL)
 0.06 -0.0 -2.74 0.24 0.13 0.48 0.17 0.24 -0.08 -3.02 0.19 0.04 1.11 -0.23 0.29 0.43 0.55 0.06 -3.03 -1.38
AKP14605 (ftsW)
 -0.05 0.3 -1.48 0.52 0.09 0.18 0.35 0.43 0.53 -1.39 -1.77 0.21 0.64 0.09 0.84 0.24 0.09 -1.63 -1.58 -0.76
AKP14638 (WX61_00559)
 -0.21 0.65 -2.39 0.82 -0.26 -0.68 0.57 0.6 1.14 -3.61 -2.48 0.95 0.88 0.52 0.5 -1.18 -0.15 -1.88 -3.07 -1.62
AKP14639 (WX61_00560)
 -0.52 0.21 -3.11 0.99 -1.0 -0.27 0.92 0.18 0.75 -4.61 -2.11 1.15 1.08 0.19 1.05 -0.6 0.11 -2.91 -3.5 -2.09
AKP14774 (WX61_00701)
 0.46 0.06 -3.13 1.15 -0.41 0.08 0.76 -0.06 0.62 -2.32 -0.22 0.78 0.7 -0.29 -0.33 0.11 0.03 -0.21 -3.89 -2.25
AKP14855 (WX61_00788)
 0.64 0.15 -2.51 0.62 0.57 -0.17 0.41 0.41 -0.08 -2.24 -0.56 0.31 0.46 0.3 0.35 -0.11 -0.26 -0.55 -2.38 -0.0
AKP14915 (mltA)
 -0.06 0.47 -1.84 -0.04 -1.33 0.49 -0.29 0.58 -0.35 -2.1 0.24 -0.45 0.67 0.44 0.22 0.49 0.5 0.43 -1.89 -0.31
AKP14930 (manX)
 0.27 -0.26 -1.0 0.3 0.47 -0.44 0.2 -0.11 0.23 -1.65 -0.28 0.32 0.77 0.03 0.26 -0.36 -0.55 -0.26 -1.18 0.86
AKP14955 (WX61_00889)
 0.37 0.25 -1.7 0.25 -0.1 0.37 -0.08 0.33 -0.23 -2.66 -0.33 -0.13 1.36 0.04 -0.1 0.32 0.46 -0.07 -1.83 -1.07
AKP15006 (WX61_00943)
 0.42 -0.58 -3.58 -0.14 1.27 -2.33 0.44 0.37 -0.79 -5.15 -2.57 0.33 2.16 -0.58 -0.03 -1.94 -3.23 -1.69 -3.06 1.47
AKP15009 (tamA)
 -0.42 0.39 -1.43 0.48 -0.42 -0.24 0.17 0.42 -0.13 -1.62 0.43 0.06 1.47 -0.12 -0.36 -0.3 -0.15 0.64 -1.29 -1.58
AKP15167 (cdsA)
 0.4 0.28 -2.38 0.4 0.58 0.25 0.36 0.25 0.19 -2.95 -0.74 0.27 0.79 -0.17 0.4 0.36 0.06 -0.6 -2.21 -0.77
AKP15180 (pdxA1)
 -0.07 0.25 -2.06 0.46 -0.08 -0.08 0.28 0.43 -0.06 -2.4 0.63 0.25 0.84 -0.3 0.29 -0.04 -0.14 0.42 -2.13 -0.64
AKP15255 (WX61_01206)
 0.03 0.96 -2.43 0.18 0.22 0.02 -0.0 0.57 -0.03 -3.07 0.11 -0.05 0.62 0.7 0.25 0.02 0.01 0.28 -2.77 -2.45
AKP15335 (secG)
 0.66 -0.16 -1.12 0.61 0.78 -1.18 0.7 0.71 0.8 -1.7 0.19 1.03 0.29 -0.8 -1.02 -1.25 -1.09 0.1 -1.45 -1.86
AKP15354 (dxs)
 0.04 0.22 -1.1 0.28 -0.35 0.28 0.05 0.36 -0.27 -1.86 0.14 -0.18 0.91 -0.03 0.26 0.26 0.31 0.35 -1.37 -0.79
AKP15548 (fadD)
 0.36 -0.14 -1.77 -0.4 0.09 0.31 -0.4 0.15 -0.26 -2.77 0.67 -0.28 1.12 -0.11 0.37 0.32 0.31 0.75 -2.13 -1.37
AKP15562 (WX61_01522)
 0.26 0.43 -1.84 0.07 0.47 0.37 0.2 0.58 0.02 -1.19 -0.88 0.04 0.07 -0.0 0.69 0.29 0.49 -0.8 -1.88 -0.6
AKP15629 (pyrC)
 -0.33 0.11 -0.38 0.16 -0.24 0.44 -0.11 0.27 -0.56 -1.29 0.11 -0.42 1.46 -0.3 -0.13 0.48 0.36 -0.11 -0.95 -1.41
AKP15655 (yfiH)
 -0.35 -0.05 -0.85 0.29 -0.16 0.31 0.26 0.03 0.42 -1.71 -0.09 0.03 1.08 -0.08 0.27 0.19 0.47 -0.09 -1.65 -1.17
AKP15712 (WX61_01677)
 -0.31 0.34 -0.03 0.25 -0.29 0.38 -0.08 0.33 0.1 -2.22 0.24 -0.08 1.2 -0.23 -0.68 0.24 0.57 -0.23 -0.86 -2.5
AKP15724 (ycfH)
 0.6 0.36 -1.54 0.13 0.59 -0.07 0.04 0.47 -0.15 -1.53 -0.19 -0.29 0.34 0.11 0.45 -0.04 -0.12 -0.03 -1.71 0.08
AKP15735 (hemX)
 0.21 0.06 -0.75 0.31 -0.13 0.18 0.22 0.25 0.09 -1.36 -0.52 -0.09 0.77 0.26 0.24 0.09 0.29 -0.37 -1.37 -0.09
AKP15756 (pasI)
 -0.04 0.0 -1.35 0.64 -0.12 0.04 0.75 0.25 0.38 -0.72 -2.63 0.39 1.14 -0.65 0.92 0.07 -0.02 -2.28 -0.95 -1.33
AKP15791 (pcnB)
 0.25 0.41 -0.81 0.27 -0.14 0.22 0.03 0.69 -0.23 -1.37 -0.81 -0.23 0.5 -0.07 1.16 0.28 0.11 -0.88 -1.07 -1.22
AKP15793 (ybeZ)
 0.26 0.23 -0.41 0.36 0.07 -0.22 0.34 0.2 0.35 -0.82 -0.71 -0.01 0.92 0.08 0.56 -0.13 -0.37 -0.65 -0.8 -0.97
AKP15810 (panB)
 0.4 0.55 -0.9 0.29 0.66 0.03 -0.19 0.66 -0.11 -1.03 -0.56 -0.43 0.51 0.26 0.25 0.15 -0.18 -0.47 -1.11 -0.77
AKP15811 (panC)
 0.34 0.66 -1.83 0.05 -0.08 0.13 -0.14 0.71 0.23 -2.41 -1.18 0.09 0.64 0.48 1.16 0.31 -0.17 -1.03 -1.78 -1.79
AKP15815 (prs)
 0.08 0.31 -1.34 -0.32 0.42 0.29 -0.33 0.56 -0.37 -1.99 0.07 -0.49 0.81 -0.03 0.38 0.24 0.36 -0.05 -1.4 0.07
AKP15974 (dnaG)
 1.32 0.25 -3.42 0.31 0.66 -0.43 0.49 0.69 0.8 -1.72 -0.62 0.6 -0.5 -0.19 0.05 -0.41 -0.45 -0.1 -4.07 -1.57
AKP16008 (tcdA)
 0.67 0.07 -1.67 0.07 0.48 -0.35 0.03 0.62 -0.03 -2.59 0.43 -0.09 0.89 -0.11 0.34 -0.3 -0.42 0.54 -2.18 -0.88
AKP16069 (WX61_02042)
 -0.2 0.45 -1.02 0.04 -0.88 0.17 0.07 0.24 0.32 -3.05 0.57 -0.19 1.15 -0.14 -0.26 0.14 0.22 0.37 -1.75 -0.38
AKP16133 (rlmB_2)
 -0.48 0.5 -0.48 0.44 -0.75 0.02 0.19 0.4 0.17 -1.37 -1.51 0.56 0.67 0.23 0.84 0.09 -0.11 -1.35 -1.03 -0.06
AKP16142 (cysI_2)
 -1.6 0.06 -0.24 0.31 -0.39 -0.1 0.76 0.4 -0.61 -2.22 -0.19 0.36 1.48 0.52 0.01 0.16 -0.61 0.15 -1.24 -1.96
AKP16144 (cysJ_2)
 -0.66 0.13 -3.02 0.75 -0.34 0.29 0.05 0.53 0.48 -4.1 -1.46 0.21 1.51 0.23 0.53 0.38 0.14 -1.24 -3.57 -0.67
AKP16186 (WX61_02162)
 0.06 -0.26 -1.2 1.03 -0.02 0.07 0.79 0.03 0.46 -1.91 -1.34 0.37 0.61 -0.43 0.62 0.1 0.04 -1.24 -1.93 -0.11
AKP16202 (aroD)
 -0.13 0.24 -1.3 0.22 -0.12 0.11 0.06 0.63 -0.16 -3.08 0.15 0.16 1.12 -0.14 0.62 0.16 0.04 0.22 -1.78 -1.89
AKP16234 (mutY)
 -0.31 -0.15 -0.99 0.43 -0.35 0.04 0.31 0.25 -0.14 -2.88 0.46 -0.21 1.38 -0.18 -0.17 0.01 0.09 0.61 -1.55 -0.73

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.