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Heatmap: Cluster_21 (HCCA)

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(Showing raw values)

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Gene
GCGS0457,reduced ceftriaxone suscept
FA1090/H041,60min+PMN
FA1090,L-log,from bact
GCGS1095,reduced ceftriaxone suscept
from N. gon mtr mut mosiac transformant
WT,from L-log cell cultures
from lab,SP319,reduced ceftriaxone suscept
FA1090/H041,0min+PMN
from lab,SP316,reduced ceftriaxone suscept
FA1090cpxR::erm,L-log,from bact
FA1090 GCM77,strain+mut,untreated
GCGS1014,reduced ceftriaxone suscept
from urethra,test for azithromycin resist
FA1090/H041,60min
WT parent,FA19 WT,from p-log cells
WT,FA19,from p-L-log cells
overexp mtrCDE,FA19,from p-L-log cells
FA1090 GCM77,strain+mut,H2O2
FA1090cpxA::kan,L-log,from bact
from p-cells
AKP14162 (WX61_00073)
 144.24 58.85 26.49 149.02 113.94 64.59 145.54 54.89 136.92 19.74 192.42 131.27 281.58 56.46 60.6 60.06 71.38 185.05 16.27 27.16
AKP14259 (WX61_00170)
 20.88 17.28 5.09 31.32 27.72 20.95 25.58 17.67 34.64 9.61 36.49 39.16 63.13 15.32 21.02 16.92 27.0 34.84 4.06 4.05
AKP14281 (WX61_00192)
 246.2 114.0 65.47 389.36 262.45 258.25 262.6 96.93 167.45 18.98 593.09 225.67 958.7 138.56 257.83 226.93 305.23 666.29 47.9 44.61
AKP14373 (apt)
 477.01 211.35 54.41 400.89 352.41 148.37 362.73 245.32 384.7 35.01 384.73 440.66 608.9 248.55 236.09 127.81 179.19 412.34 43.24 131.04
AKP14393 (trmA)
 167.04 142.21 145.37 194.35 205.01 144.48 182.62 175.77 242.71 71.14 216.16 225.92 430.69 119.59 162.65 154.07 130.09 198.94 110.0 59.33
AKP14394 (aroC)
 140.74 76.63 114.4 133.77 115.73 77.14 137.9 71.22 145.37 46.89 305.54 125.85 417.74 82.2 50.97 68.33 90.36 284.2 71.38 62.49
AKP14430 (mtrR)
 334.9 25.1 71.39 243.71 131.08 47.24 279.09 23.81 426.33 28.58 399.77 331.72 509.59 23.49 50.92 50.23 42.77 341.5 88.33 116.68
AKP14771 (yohK)
 91.96 43.47 23.65 160.92 78.28 69.14 124.75 36.98 116.45 11.65 239.48 154.65 445.63 59.96 60.3 59.25 83.98 257.12 17.25 91.95
AKP14775 (hrpB)
 143.58 37.46 62.31 117.79 62.14 43.27 109.59 41.54 107.94 30.03 168.9 104.29 290.43 47.37 47.79 43.19 43.37 156.49 36.89 27.94
AKP14840 (WX61_00773)
 607.92 626.7 390.19 1440.44 571.81 466.66 1180.01 640.58 1046.0 139.13 958.72 1127.29 2163.08 794.17 202.87 356.89 631.32 827.29 308.7 700.55
AKP14908 (yieH)
 55.18 29.03 17.97 56.11 30.15 46.61 39.68 30.72 36.22 11.39 115.59 41.96 97.96 37.63 60.37 47.23 45.67 86.96 15.04 13.37
AKP14928 (ptsI)
 151.6 76.99 32.28 155.21 218.91 172.05 158.39 75.87 119.16 24.01 236.78 140.71 395.61 71.41 128.8 156.93 194.72 200.81 28.0 70.03
AKP15002 (argG)
 227.36 124.42 121.4 287.53 163.19 297.92 254.4 83.8 226.55 96.02 606.8 217.45 811.22 193.24 235.65 267.82 343.06 575.38 97.13 193.8
AKP15011 (dtpT)
 66.57 100.67 20.19 227.35 73.25 29.48 133.93 85.47 108.18 23.3 66.05 281.48 266.12 85.86 26.79 29.53 29.41 73.93 17.28 81.15
AKP15033 (mutS)
 67.58 60.14 21.76 78.04 79.1 80.06 65.76 58.47 63.43 18.11 123.6 52.99 159.2 48.26 91.6 84.52 73.36 101.45 23.07 36.8
AKP15173 (yeeA)
 47.19 21.9 40.48 75.52 57.31 46.89 72.29 24.83 28.01 11.12 62.9 47.36 148.4 32.54 37.44 44.63 50.27 108.45 24.44 15.34
AKP15177 (rnhB)
 58.56 52.45 23.68 60.54 38.49 42.19 71.25 54.2 58.88 22.46 43.05 58.68 107.84 24.58 20.24 49.42 31.36 38.1 20.42 21.1
AKP15213 (WX61_01164)
 557.92 155.5 157.13 386.0 217.84 140.38 324.39 141.27 463.45 94.13 427.11 443.3 813.69 152.59 140.0 130.02 155.91 450.49 154.12 101.44
AKP15217 (mtr)
 62.22 61.61 21.7 122.35 81.68 49.04 76.48 45.31 72.71 18.77 192.08 104.96 337.0 59.09 47.18 43.79 56.92 163.56 26.5 35.26
AKP15220 (gntK)
 77.7 95.49 26.45 281.99 49.22 69.02 180.14 111.24 133.58 19.54 35.28 206.72 247.84 102.54 26.39 65.42 74.42 44.44 21.72 180.12
AKP15234 (WX61_01185)
 30.4 45.98 3.05 82.03 40.47 23.13 58.31 35.91 48.78 1.58 14.08 79.35 127.05 48.74 22.01 21.67 25.32 17.84 2.71 5.65
AKP15268 (fadM)
 155.9 89.74 40.49 187.26 115.54 103.79 173.19 74.42 126.5 34.55 329.51 118.77 338.27 99.44 76.64 93.67 118.96 252.78 43.59 45.39
AKP15388 (ppaX)
 75.81 69.82 105.62 78.14 56.35 77.83 63.22 68.97 69.38 49.62 157.79 46.69 211.84 73.03 46.5 81.8 71.86 164.51 61.13 27.6
AKP15453 (mucD)
 242.71 110.11 96.15 311.88 185.61 214.36 273.12 110.52 255.6 108.17 404.16 247.81 547.06 156.48 257.31 185.24 258.03 434.08 62.18 230.71
AKP15480 (mntB)
 106.75 23.02 8.67 68.93 100.16 18.16 101.35 10.52 102.57 9.18 117.22 62.73 197.59 23.41 19.36 19.63 15.94 106.03 4.24 23.3
AKP15481 (znuC)
 174.65 111.46 15.64 132.59 164.29 47.03 156.32 50.82 161.46 14.54 236.33 111.6 565.76 139.43 58.3 37.75 60.94 233.26 9.6 61.45
AKP15503 (zraR)
 38.54 32.79 11.7 83.08 30.34 27.31 61.0 30.63 68.77 13.03 83.25 73.04 144.78 28.12 21.37 24.64 31.31 60.77 7.07 18.43
AKP15556 (WX61_01516)
 32.62 32.24 6.27 27.98 36.92 8.37 32.41 15.85 48.22 6.72 46.8 19.89 50.09 18.89 14.07 8.66 7.94 32.42 3.45 10.23
AKP15588 (cysW_2)
 121.15 115.08 30.65 148.32 112.36 35.77 141.93 84.68 131.21 21.21 128.25 118.04 239.01 57.05 49.34 33.62 38.98 177.4 21.51 29.25
AKP15624 (WX61_01586)
 139.47 124.39 72.23 228.37 125.45 57.86 199.9 66.48 200.66 90.88 344.68 175.73 631.59 209.61 82.61 56.22 60.33 441.43 47.53 83.8
AKP15648 (WX61_01610)
 13.79 12.47 12.32 28.45 9.91 13.71 24.39 15.56 24.2 3.88 3.1 29.07 31.09 14.05 13.3 12.43 15.64 4.79 8.67 16.24
AKP15663 (rpoH)
 2253.14 950.18 317.4 2138.36 1474.42 619.35 1713.81 1501.73 1493.87 264.52 2712.12 1718.28 3446.15 1329.49 909.27 556.75 713.23 3153.75 417.94 1761.04
AKP15694 (mnmC)
 18.65 12.22 21.13 34.77 13.38 6.1 29.53 8.31 28.11 7.13 54.2 19.25 57.02 11.3 6.02 4.94 7.83 48.49 13.0 7.97
AKP15703 (pbpG)
 190.59 77.28 166.91 211.18 123.91 69.47 218.35 52.44 229.43 69.39 381.97 159.29 613.55 93.63 77.21 64.39 77.1 307.03 100.36 56.91
AKP15767 (WX61_01732)
 197.35 182.83 275.97 180.84 141.35 172.51 161.32 159.27 133.43 114.0 318.95 105.76 326.09 183.13 149.5 153.48 201.04 361.88 152.06 78.14
AKP15778 (hldD)
 183.65 153.05 58.77 272.08 227.48 152.09 224.14 129.38 205.7 56.09 347.68 232.92 563.1 140.7 129.06 148.29 157.78 326.48 38.82 231.43
AKP15915 (nlpD)
 394.01 240.12 94.62 452.07 559.79 506.53 411.72 182.7 403.25 55.44 918.87 343.17 1717.82 318.76 594.52 432.23 617.98 1026.98 76.64 400.13
AKP15979 (WX61_01951)
 59.81 60.16 28.13 89.83 38.96 47.85 90.62 74.53 81.3 9.62 54.37 110.13 126.88 48.15 47.52 46.66 49.63 55.64 15.22 35.28
AKP16017 (dapA)
 702.8 328.38 241.94 625.81 456.33 472.74 793.62 274.01 734.87 176.67 815.71 462.39 1222.06 234.87 272.47 463.98 485.88 862.45 142.02 180.61
AKP16059 (hsrA)
 98.35 37.68 17.23 89.21 43.41 24.06 78.01 46.54 77.7 9.24 40.49 78.54 113.9 41.52 27.67 20.34 29.65 44.21 12.16 23.21
AKP16089 (yqjA)
 158.47 82.1 25.41 143.89 95.7 51.76 144.97 122.02 127.95 10.99 86.26 146.45 173.12 76.72 51.17 48.17 57.15 95.14 14.51 35.66
AKP16101 (plsY)
 616.85 211.34 256.98 418.45 550.4 255.39 408.77 213.58 370.52 46.12 661.9 368.02 883.94 228.47 366.59 245.86 269.69 981.43 203.65 112.75
AKP16156 (lipB)
 193.41 98.89 77.16 205.48 144.82 179.74 174.38 77.64 284.8 53.09 339.42 283.67 383.58 108.07 114.67 162.81 205.14 379.96 58.24 110.17
AKP16195 (WX61_02171)
 118.21 70.95 175.54 91.47 127.71 106.5 85.72 73.0 76.86 50.83 295.76 66.76 358.76 78.81 86.37 103.17 111.49 259.13 127.27 21.0
AKP16198 (mutL)
 57.22 41.17 20.14 62.06 26.27 29.82 54.53 35.12 59.64 9.14 101.47 40.65 162.87 28.38 29.21 27.95 32.63 111.51 12.67 9.52

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)