Heatmap: Cluster_21 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
GCGS0457,reduced ceftriaxone suscept
FA1090/H041,60min+PMN
FA1090,L-log,from bact
GCGS1095,reduced ceftriaxone suscept
from N. gon mtr mut mosiac transformant
WT,from L-log cell cultures
from lab,SP319,reduced ceftriaxone suscept
FA1090/H041,0min+PMN
from lab,SP316,reduced ceftriaxone suscept
FA1090cpxR::erm,L-log,from bact
FA1090 GCM77,strain+mut,untreated
GCGS1014,reduced ceftriaxone suscept
from urethra,test for azithromycin resist
FA1090/H041,60min
WT parent,FA19 WT,from p-log cells
WT,FA19,from p-L-log cells
overexp mtrCDE,FA19,from p-L-log cells
FA1090 GCM77,strain+mut,H2O2
FA1090cpxA::kan,L-log,from bact
from p-cells
AKP14162 (WX61_00073)
0.53 -0.76 -1.91 0.58 0.19 -0.63 0.54 -0.86 0.46 -2.34 0.95 0.4 1.5 -0.82 -0.72 -0.73 -0.48 0.89 -2.62 -1.88
AKP14259 (WX61_00170)
-0.18 -0.45 -2.22 0.41 0.23 -0.17 0.11 -0.42 0.55 -1.3 0.63 0.73 1.42 -0.63 -0.17 -0.48 0.19 0.56 -2.54 -2.54
AKP14281 (WX61_00192)
-0.12 -1.23 -2.03 0.54 -0.03 -0.05 -0.03 -1.46 -0.67 -3.82 1.15 -0.24 1.84 -0.95 -0.05 -0.24 0.19 1.32 -2.48 -2.58
AKP14373 (apt)
0.8 -0.38 -2.33 0.55 0.36 -0.89 0.4 -0.16 0.49 -2.97 0.49 0.68 1.15 -0.14 -0.22 -1.1 -0.61 0.59 -2.67 -1.07
AKP14393 (trmA)
-0.06 -0.29 -0.26 0.16 0.24 -0.27 0.07 0.02 0.48 -1.29 0.31 0.38 1.31 -0.54 -0.1 -0.17 -0.42 0.19 -0.66 -1.55
AKP14394 (aroC)
0.1 -0.77 -0.19 0.03 -0.18 -0.76 0.07 -0.88 0.15 -1.48 1.22 -0.06 1.67 -0.67 -1.36 -0.94 -0.54 1.12 -0.88 -1.07
AKP14430 (mtrR)
0.91 -2.83 -1.32 0.45 -0.44 -1.92 0.65 -2.9 1.26 -2.64 1.16 0.9 1.51 -2.92 -1.81 -1.83 -2.06 0.94 -1.01 -0.61
AKP14771 (yohK)
-0.28 -1.36 -2.24 0.53 -0.51 -0.69 0.16 -1.59 0.06 -3.26 1.1 0.47 2.0 -0.89 -0.88 -0.91 -0.41 1.21 -2.69 -0.28
AKP14775 (hrpB)
0.74 -1.2 -0.47 0.45 -0.47 -0.99 0.35 -1.05 0.33 -1.52 0.97 0.28 1.75 -0.86 -0.85 -1.0 -0.99 0.86 -1.22 -1.62
AKP14840 (WX61_00773)
-0.32 -0.28 -0.96 0.92 -0.41 -0.7 0.64 -0.24 0.46 -2.45 0.34 0.57 1.51 0.07 -1.9 -1.09 -0.27 0.12 -1.3 -0.12
AKP14908 (yieH)
0.27 -0.66 -1.35 0.29 -0.6 0.03 -0.21 -0.57 -0.34 -2.01 1.34 -0.12 1.1 -0.28 0.4 0.05 -0.0 0.93 -1.6 -1.77
AKP14928 (ptsI)
0.11 -0.87 -2.12 0.14 0.64 0.29 0.17 -0.89 -0.24 -2.55 0.75 0.0 1.49 -0.98 -0.12 0.16 0.47 0.52 -2.33 -1.0
AKP15002 (argG)
-0.25 -1.12 -1.16 0.08 -0.73 0.14 -0.09 -1.69 -0.26 -1.5 1.16 -0.32 1.58 -0.49 -0.2 -0.02 0.34 1.09 -1.48 -0.48
AKP15011 (dtpT)
-0.46 0.14 -2.18 1.32 -0.32 -1.63 0.55 -0.1 0.24 -1.97 -0.47 1.62 1.54 -0.09 -1.77 -1.63 -1.63 -0.3 -2.4 -0.17
AKP15033 (mutS)
-0.04 -0.21 -1.67 0.17 0.19 0.21 -0.08 -0.25 -0.13 -1.94 0.83 -0.39 1.2 -0.52 0.4 0.29 0.08 0.55 -1.59 -0.91
AKP15173 (yeeA)
-0.08 -1.19 -0.3 0.6 0.2 -0.09 0.54 -1.01 -0.83 -2.17 0.33 -0.07 1.57 -0.62 -0.41 -0.16 0.01 1.12 -1.03 -1.7
AKP15177 (rnhB)
0.38 0.22 -0.92 0.43 -0.22 -0.09 0.67 0.27 0.39 -1.0 -0.06 0.39 1.26 -0.87 -1.15 0.14 -0.52 -0.24 -1.14 -1.09
AKP15213 (WX61_01164)
0.99 -0.85 -0.84 0.46 -0.36 -1.0 0.21 -0.99 0.73 -1.57 0.61 0.66 1.54 -0.88 -1.0 -1.11 -0.85 0.68 -0.86 -1.47
AKP15217 (mtr)
-0.43 -0.45 -1.95 0.54 -0.04 -0.77 -0.13 -0.89 -0.21 -2.16 1.19 0.32 2.01 -0.51 -0.83 -0.94 -0.56 0.96 -1.66 -1.25
AKP15220 (gntK)
-0.4 -0.1 -1.95 1.46 -1.06 -0.57 0.81 0.12 0.38 -2.39 -1.54 1.01 1.27 0.0 -1.96 -0.65 -0.46 -1.21 -2.24 0.81
AKP15234 (WX61_01185)
-0.27 0.33 -3.59 1.16 0.14 -0.67 0.67 -0.03 0.41 -4.54 -1.38 1.11 1.79 0.41 -0.74 -0.76 -0.54 -1.04 -3.76 -2.7
AKP15268 (fadM)
0.25 -0.54 -1.69 0.52 -0.18 -0.34 0.4 -0.81 -0.05 -1.92 1.33 -0.14 1.37 -0.4 -0.77 -0.48 -0.14 0.95 -1.59 -1.53
AKP15388 (ppaX)
-0.13 -0.25 0.35 -0.08 -0.56 -0.09 -0.39 -0.26 -0.26 -0.74 0.93 -0.83 1.35 -0.18 -0.83 -0.02 -0.21 0.99 -0.44 -1.59
AKP15453 (mucD)
0.05 -1.09 -1.29 0.41 -0.34 -0.13 0.22 -1.09 0.12 -1.12 0.78 0.08 1.22 -0.58 0.13 -0.34 0.14 0.89 -1.92 -0.02
AKP15480 (mntB)
0.91 -1.31 -2.71 0.28 0.81 -1.65 0.83 -2.44 0.85 -2.63 1.04 0.14 1.8 -1.28 -1.56 -1.54 -1.84 0.9 -3.75 -1.29
AKP15481 (znuC)
0.46 -0.19 -3.02 0.06 0.37 -1.44 0.3 -1.32 0.34 -3.13 0.89 -0.19 2.15 0.13 -1.13 -1.75 -1.06 0.88 -3.73 -1.05
AKP15503 (zraR)
-0.21 -0.44 -1.93 0.9 -0.55 -0.7 0.46 -0.54 0.63 -1.77 0.9 0.72 1.7 -0.66 -1.06 -0.85 -0.51 0.45 -2.65 -1.27
AKP15556 (WX61_01516)
0.5 0.49 -1.87 0.28 0.68 -1.46 0.49 -0.54 1.07 -1.78 1.02 -0.21 1.12 -0.28 -0.71 -1.41 -1.53 0.5 -2.74 -1.17
AKP15588 (cysW_2)
0.4 0.33 -1.58 0.69 0.29 -1.36 0.63 -0.12 0.52 -2.11 0.48 0.36 1.38 -0.69 -0.89 -1.45 -1.23 0.95 -2.09 -1.65
AKP15624 (WX61_01586)
-0.3 -0.47 -1.25 0.41 -0.45 -1.57 0.22 -1.37 0.22 -0.92 1.0 0.03 1.88 0.29 -1.06 -1.61 -1.51 1.36 -1.86 -1.04
AKP15648 (WX61_01610)
-0.15 -0.3 -0.32 0.89 -0.63 -0.16 0.67 0.02 0.66 -1.99 -2.31 0.92 1.02 -0.13 -0.21 -0.3 0.03 -1.68 -0.83 0.08
AKP15663 (rpoH)
0.61 -0.63 -2.21 0.54 0.0 -1.25 0.22 0.03 0.02 -2.48 0.88 0.22 1.23 -0.15 -0.7 -1.4 -1.05 1.1 -1.82 0.26
AKP15694 (mnmC)
-0.13 -0.74 0.05 0.76 -0.61 -1.75 0.53 -1.3 0.46 -1.52 1.41 -0.09 1.48 -0.86 -1.77 -2.05 -1.39 1.24 -0.66 -1.36
AKP15703 (pbpG)
0.19 -1.11 -0.0 0.34 -0.43 -1.27 0.39 -1.67 0.46 -1.27 1.19 -0.07 1.88 -0.84 -1.11 -1.38 -1.12 0.88 -0.73 -1.55
AKP15767 (WX61_01732)
0.07 -0.04 0.56 -0.05 -0.41 -0.12 -0.22 -0.23 -0.49 -0.72 0.77 -0.83 0.8 -0.03 -0.33 -0.29 0.1 0.95 -0.3 -1.26
AKP15778 (hldD)
-0.12 -0.38 -1.76 0.45 0.19 -0.39 0.17 -0.62 0.05 -1.83 0.81 0.23 1.5 -0.5 -0.62 -0.42 -0.33 0.71 -2.36 0.22
AKP15915 (nlpD)
-0.31 -1.02 -2.36 -0.11 0.2 0.06 -0.24 -1.42 -0.27 -3.14 0.91 -0.51 1.82 -0.61 0.29 -0.17 0.34 1.08 -2.67 -0.28
AKP15979 (WX61_01951)
0.03 0.04 -1.06 0.62 -0.59 -0.29 0.63 0.35 0.47 -2.6 -0.11 0.91 1.12 -0.28 -0.3 -0.33 -0.24 -0.07 -1.94 -0.73
AKP16017 (dapA)
0.5 -0.6 -1.04 0.33 -0.12 -0.07 0.67 -0.86 0.56 -1.49 0.71 -0.11 1.3 -1.08 -0.87 -0.1 -0.03 0.79 -1.81 -1.46
AKP16059 (hsrA)
1.05 -0.34 -1.47 0.9 -0.13 -0.99 0.71 -0.03 0.71 -2.37 -0.24 0.72 1.26 -0.2 -0.78 -1.23 -0.68 -0.11 -1.97 -1.04
AKP16089 (yqjA)
0.86 -0.09 -1.78 0.72 0.13 -0.76 0.73 0.48 0.55 -2.99 -0.02 0.74 0.99 -0.19 -0.77 -0.86 -0.61 0.12 -2.59 -1.29
AKP16101 (plsY)
0.69 -0.86 -0.58 0.13 0.52 -0.59 0.09 -0.84 -0.05 -3.06 0.79 -0.06 1.2 -0.75 -0.07 -0.64 -0.51 1.36 -0.91 -1.77
AKP16156 (lipB)
0.09 -0.88 -1.24 0.18 -0.33 -0.02 -0.06 -1.23 0.65 -1.78 0.9 0.64 1.08 -0.75 -0.66 -0.16 0.17 1.06 -1.64 -0.72
AKP16195 (WX61_02171)
-0.07 -0.81 0.5 -0.44 0.04 -0.22 -0.54 -0.77 -0.69 -1.29 1.25 -0.9 1.53 -0.66 -0.52 -0.27 -0.16 1.06 0.03 -2.56
AKP16198 (mutL)
0.27 -0.21 -1.24 0.38 -0.86 -0.67 0.2 -0.44 0.33 -2.38 1.09 -0.23 1.77 -0.75 -0.7 -0.77 -0.54 1.23 -1.91 -2.32

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.