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Heatmap: Cluster_41 (HCCA)

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(Showing raw values)

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Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL16956 (BN171_1030006)
 6.27 1.06 14.12 3.71 13.74 32.88 31.73 5.06 3.03 73.17 49.79 57.78 66.02 23.64 2.7 104.91 28.97 11.67 13.37 1.41 1.12 0.21 14.51 4.67 13.9 1.05 2.98 32.59 61.85
CCL17136 (BN171_1300001)
 240.58 44.55 133.22 26.78 50.04 130.74 52.62 102.39 105.3 119.87 110.02 115.27 132.01 142.05 31.99 172.93 87.68 72.19 84.98 143.92 38.21 172.05 101.92 111.93 98.18 60.02 16.49 151.2 106.47
CCL17158 (BN171_1330019)
 0.76 1.07 1.02 1.16 0.15 45.03 12.12 0.42 21.04 13.28 10.58 12.7 28.96 1.05 0.46 31.04 6.51 0.53 12.36 4.64 3.56 0.0 25.76 9.22 17.46 1.86 3.42 28.43 13.73
CCL17246 (BN171_1410008)
 465.46 178.53 440.61 353.4 473.25 280.44 496.35 215.56 176.52 481.72 628.84 456.19 382.91 577.26 209.84 404.07 372.2 388.22 247.58 633.94 575.92 218.99 376.84 238.1 345.55 444.3 72.29 317.03 568.0
CCL17356 (xseB)
 22.72 14.0 64.86 45.69 105.22 118.83 158.57 25.59 106.21 242.47 188.54 159.7 101.47 121.32 25.47 87.04 86.81 31.63 115.58 181.43 59.55 3.96 199.32 83.42 119.84 45.2 25.25 132.59 186.8
CCL17507 (BN171_1520025)
 19.18 21.55 21.8 20.15 16.82 40.06 52.53 13.65 89.83 91.05 74.3 72.61 83.9 19.72 18.44 59.74 34.23 17.81 37.89 33.0 26.2 22.85 53.01 58.67 53.25 13.55 21.66 40.94 70.32
CCL17519 (BN171_1520037)
 6.47 1.43 8.92 3.53 4.26 14.83 15.83 2.0 11.91 18.35 13.83 16.44 23.83 10.86 2.25 26.65 10.41 4.85 18.92 10.6 4.45 3.93 22.08 14.8 21.85 5.49 2.08 21.99 15.67
CCL17571 (BN171_1570004)
 263.35 100.54 290.62 124.51 113.25 213.31 160.97 99.48 168.29 134.04 124.72 133.62 231.28 263.81 94.81 381.0 130.99 149.0 108.06 323.61 125.15 94.75 175.02 172.47 151.96 93.33 54.43 254.99 109.48
CCL17578 (BN171_1590002)
 9.4 2.62 11.65 9.3 10.3 32.02 54.46 2.75 55.89 57.2 42.62 44.37 55.87 15.01 6.12 60.36 21.23 9.6 25.45 16.52 11.62 14.71 36.38 47.17 42.5 4.78 9.8 51.99 38.08
CCL17579 (BN171_1590003)
 3.52 1.26 5.58 5.56 6.32 7.76 26.01 0.72 8.35 27.55 19.89 25.05 26.35 6.04 2.74 34.11 14.37 4.08 12.38 7.63 6.05 3.36 14.77 8.8 10.45 3.35 5.11 17.47 18.86
CCL17580 (ddl)
 3.89 2.24 4.8 5.2 7.76 28.75 60.27 5.47 5.12 85.78 62.65 82.54 64.44 4.56 4.43 99.81 46.51 7.95 30.4 9.07 4.7 12.12 25.57 8.26 39.2 8.49 26.53 59.4 67.68
CCL17623 (BN171_1640013)
 133.44 21.47 159.92 86.86 88.89 101.06 66.6 45.66 105.83 88.25 86.9 89.46 140.57 219.03 28.4 194.88 83.6 56.29 94.15 124.96 37.9 27.95 183.82 52.54 71.43 42.65 35.75 76.55 88.2
CCL17672 (BN171_1670004)
 2.94 2.92 3.24 5.22 2.96 1.42 5.94 3.41 1.47 3.22 2.48 4.52 10.31 3.35 3.69 17.95 4.49 4.01 1.32 2.36 3.54 2.48 1.7 2.03 3.23 1.58 1.21 3.18 2.67
CCL17720 (BN171_1720001)
 2.05 1.54 73.21 10.26 14.39 37.33 53.09 1.27 10.53 45.65 35.41 45.32 48.92 24.53 1.82 96.67 34.14 2.8 27.6 174.25 23.64 6.31 73.83 29.72 37.89 11.27 39.41 62.57 33.88
CCL17741 (BN171_1750002)
 1.81 1.31 1.44 2.99 1.68 0.59 5.75 1.81 1.29 3.76 2.6 2.94 3.22 1.57 1.93 2.62 1.47 1.56 1.92 1.16 1.42 2.01 1.69 1.8 1.76 1.06 0.43 2.52 2.49
CCL17808 (BN171_1810015)
 3.24 2.96 5.06 10.47 5.83 1.84 3.97 1.5 8.97 5.26 3.6 3.7 8.01 3.63 5.18 6.94 3.2 3.59 4.51 4.02 4.59 6.41 7.28 7.49 5.95 2.08 1.61 2.82 2.98
CCL17809 (BN171_1810016)
 1.62 1.69 2.39 5.11 2.65 0.83 6.47 1.44 1.84 3.66 4.46 5.74 4.9 1.46 2.53 2.24 2.27 2.09 2.86 1.05 2.04 1.25 5.38 4.59 1.73 0.5 0.76 1.81 3.89
CCL17847 (BN171_1840007)
 1.89 0.49 8.05 7.41 6.2 37.91 64.16 0.75 6.46 91.88 90.46 99.17 56.68 7.09 1.58 76.66 26.15 3.18 31.14 7.03 9.35 4.83 44.56 22.75 29.42 1.48 8.5 68.07 112.67
CCL17920 (BN171_1940009)
 1.82 0.84 12.4 10.6 5.85 42.42 42.43 1.36 55.17 48.41 46.08 43.99 83.04 13.5 4.23 123.34 27.32 2.88 37.85 22.14 24.03 1.14 36.73 39.8 37.19 4.1 3.48 50.04 49.09
CCL17921 (mobA)
 18.84 4.88 34.77 80.14 27.89 77.81 58.25 4.42 15.17 50.45 42.25 47.08 69.45 27.28 38.46 97.79 48.81 18.11 43.82 59.81 86.19 9.57 41.63 48.95 49.85 38.68 10.53 60.16 40.36
CCL17922 (BN171_1940011)
 37.94 4.4 55.23 44.53 31.77 195.3 82.44 7.25 59.0 100.83 82.75 124.01 152.18 45.49 17.89 196.87 46.53 20.23 91.43 57.56 44.53 9.93 116.35 98.22 136.27 30.11 11.47 94.54 101.89
CCL18042 (terD)
 47.15 89.83 48.09 63.5 55.58 148.9 117.48 69.1 48.05 155.92 99.78 125.77 158.89 37.5 67.26 183.5 85.63 68.43 90.12 67.03 66.6 33.73 66.89 78.42 106.86 59.88 29.74 70.85 93.84
CCL18057 (BN171_2090001)
 5.02 1.28 12.81 4.26 5.9 30.66 20.63 0.75 5.98 27.41 16.71 22.03 23.32 16.07 1.84 29.76 5.17 2.7 14.7 18.91 4.99 1.64 19.24 7.77 11.01 3.25 1.93 10.32 27.27
CCL18141 (BN171_2120001)
 27.9 25.69 22.73 24.69 11.39 41.38 39.63 13.56 31.97 39.23 37.37 33.55 50.16 20.98 20.4 46.91 18.9 21.78 22.82 38.71 28.05 17.81 25.46 40.68 51.48 18.25 30.02 36.78 23.52
CCL18402 (BN171_2290007)
 84.99 12.57 131.54 38.25 48.32 70.22 159.09 26.82 32.13 129.64 123.37 87.37 127.99 180.99 16.25 161.56 42.24 44.65 75.64 129.07 57.24 12.53 119.23 40.06 73.84 36.18 11.95 64.8 105.81
CCL18585 (BN171_2440026)
 1.11 0.73 1.19 2.02 1.42 1.68 3.29 0.45 2.57 3.56 1.79 1.11 3.65 0.72 0.74 3.87 1.39 0.79 1.7 1.74 1.75 3.21 3.44 2.71 2.83 0.84 0.95 1.91 1.62
CCL18604 (cynT)
 164.42 56.02 182.45 62.76 75.18 47.01 186.43 48.46 63.64 127.56 103.73 111.06 113.89 82.61 38.84 213.09 35.7 67.04 45.79 244.14 67.15 25.69 66.96 122.18 110.95 71.71 78.69 73.66 67.11
CCL18632 (BN171_2480007)
 26.68 7.02 27.67 32.0 27.23 20.19 39.33 13.48 27.8 63.63 48.7 48.72 59.15 25.48 10.38 82.98 24.76 25.52 23.39 24.33 16.71 14.0 41.07 41.6 48.94 24.85 3.87 48.65 47.59
CCL18633 (BN171_2480008)
 15.38 6.02 21.92 24.06 17.95 35.02 46.83 10.58 38.25 58.89 49.33 46.89 64.63 23.85 9.29 89.53 22.07 17.46 25.74 23.74 13.3 11.9 44.82 49.95 55.8 17.33 5.15 57.38 45.25
CCL18634 (BN171_2480009)
 14.6 11.45 22.45 34.17 18.67 11.47 17.22 11.74 23.87 18.82 20.36 17.97 26.42 21.21 11.91 30.27 11.32 13.62 10.53 12.3 9.25 14.0 13.63 8.29 7.75 11.88 2.41 16.49 12.34
CCL18671 (BN171_2480046)
 12.02 6.17 16.15 7.99 18.0 53.47 36.59 8.59 5.27 49.21 42.2 41.78 35.37 19.3 4.18 41.8 12.68 12.99 19.83 29.25 10.05 7.69 28.64 15.13 28.28 26.6 7.43 65.08 44.78
CCL18681 (BN171_2480056)
 7.77 0.78 18.41 10.43 11.68 9.63 13.91 1.98 5.78 23.72 16.07 19.04 11.73 18.13 1.26 19.41 6.21 7.07 9.32 19.77 10.24 3.41 19.16 4.11 10.5 6.48 2.76 14.38 16.93
CCL18724 (BN171_2590012)
 11.11 15.55 13.28 22.45 12.44 18.58 37.83 11.42 19.46 43.27 34.3 35.32 27.29 15.67 17.33 22.95 14.41 14.3 17.31 11.99 11.57 17.16 17.82 14.48 15.51 7.22 8.43 39.95 33.46
CCL18765 (BN171_2610005)
 25.32 8.06 34.63 13.34 20.62 49.32 55.51 10.95 26.69 92.43 61.91 69.69 112.59 26.68 12.01 163.4 36.2 20.09 24.81 37.36 13.29 16.55 29.74 60.29 58.46 10.69 10.67 40.15 44.25
CCL18803 (BN171_2640002)
 105.09 40.75 102.71 70.9 71.44 134.65 107.07 39.45 67.53 109.94 115.74 108.12 130.98 120.87 41.37 193.46 69.47 67.08 86.32 140.08 52.9 64.9 126.45 81.42 112.85 66.81 51.25 140.9 91.45
CCL18804 (polC)
 22.18 4.11 58.86 29.29 39.8 66.9 75.23 6.07 56.99 95.63 109.26 101.5 80.05 60.08 12.69 120.35 35.42 20.1 43.96 99.57 47.01 11.47 73.81 38.76 56.05 29.52 19.54 92.93 87.17
CCL18831 (BN171_2670013)
 0.76 0.65 0.92 0.88 0.85 2.09 1.86 0.47 0.51 2.09 1.06 2.58 1.94 0.7 0.31 2.77 0.73 0.7 1.38 1.75 1.16 0.94 1.17 0.86 0.84 0.88 0.67 4.32 0.67
CCL18844 (glyS)
 310.86 193.16 259.33 177.71 195.88 206.61 325.5 161.74 103.28 540.22 528.18 478.82 464.7 237.23 170.52 615.65 239.22 194.38 241.53 261.79 174.73 241.92 369.39 224.08 387.04 149.69 291.78 504.82 490.99
CCL18849 (BN171_2690006)
 124.82 68.36 117.54 102.88 94.01 188.68 345.97 51.35 44.04 311.98 288.28 265.88 233.96 124.67 75.4 279.06 97.77 87.51 162.35 159.65 107.25 172.43 265.28 130.44 188.63 95.19 91.48 236.57 237.76
CCL18959 (BN171_2770010)
 8.33 8.37 6.58 11.24 8.09 6.87 22.74 7.95 9.67 15.46 16.25 17.12 14.42 4.57 7.84 18.1 7.23 7.8 10.34 4.54 7.77 12.99 13.78 15.39 12.2 4.08 4.62 8.49 12.89
CCL19127 (BN171_2870057)
 2.09 0.12 20.94 16.24 9.87 37.98 29.16 0.4 118.61 61.73 40.54 32.71 52.58 13.81 1.74 40.76 10.12 3.16 54.59 15.1 8.21 17.16 91.6 80.35 74.78 4.98 7.32 69.51 26.17
CCL19156 (hpt)
 39.8 4.15 62.46 24.12 76.0 120.5 159.76 17.56 47.74 259.38 347.22 300.24 240.26 68.15 10.65 356.55 154.01 43.35 97.81 100.78 31.03 17.7 176.89 175.9 223.08 61.31 22.3 296.56 394.34
CCL19306 (BN171_3020018)
 27.38 12.83 31.49 14.36 19.87 19.41 31.9 18.75 5.72 57.01 60.3 35.18 23.59 26.58 11.66 31.5 18.28 25.74 18.88 44.88 11.87 4.44 51.51 23.34 38.97 22.7 4.69 35.26 30.11
CCL19334 (serS)
 21.03 13.87 12.77 23.71 14.36 48.32 25.94 9.19 28.04 30.06 24.59 22.96 47.88 15.62 12.0 69.53 21.84 14.31 34.19 11.71 14.01 17.8 40.86 19.14 30.71 8.35 16.8 15.86 16.71
CCL19374 (BN171_3080021)
 104.8 93.1 84.1 65.98 86.3 74.41 141.7 105.36 18.89 116.7 112.06 120.85 150.1 70.04 24.6 271.71 77.54 103.21 49.33 51.89 48.55 8.61 80.44 106.03 105.23 48.19 38.53 129.62 110.57
CCL19893 (BN171_3590014)
 1.62 1.03 2.28 4.07 2.88 2.88 1.8 1.02 3.7 2.92 2.41 1.62 7.51 0.96 1.46 9.85 2.81 1.49 5.03 2.07 4.58 3.91 5.61 4.63 7.08 1.93 2.24 3.8 1.82
CCL19897 (BN171_3590018)
 0.65 0.64 1.48 1.64 1.65 3.24 0.88 0.65 2.33 4.32 2.96 1.97 5.63 1.0 0.8 8.55 1.27 0.94 2.57 2.07 2.16 0.5 2.71 1.0 2.44 0.97 0.29 2.46 2.77
CCL20694 (BN171_930005)
 60.05 13.4 53.18 27.37 34.11 27.2 54.48 21.15 21.55 53.35 41.18 62.63 85.19 56.1 25.26 127.27 28.05 53.9 33.45 47.17 17.99 35.26 39.43 26.44 71.55 23.31 8.92 50.87 41.67
CCL20695 (BN171_930006)
 122.57 47.5 136.78 93.19 99.22 84.97 75.49 78.35 11.35 61.34 46.55 64.82 92.74 136.24 66.35 162.47 46.51 125.48 47.01 118.07 43.2 73.27 44.18 31.95 68.04 68.06 21.31 72.45 53.51
CCL20696 (BN171_930007)
 18.87 3.79 17.98 9.62 15.9 16.97 28.79 6.89 4.11 27.32 26.91 32.41 31.65 24.99 4.83 47.16 7.44 15.18 18.9 28.4 9.28 7.97 23.73 11.8 25.64 12.32 3.4 16.69 23.1

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)