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View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | BHI | Basal Medium | CD196,BHI | CD196,Basal Medium | CD196,Log,BHI | ClnR mutant | LB-CD16 | Log,BHI | LuxS KO | ND-CD12 | ND-CD13 | ND-CD17 | R20291 | R20291,BHI | R20291,Basal Medium | R20291,Heme+ | R20291,Log | R20291,Log,BHI | Strain 630 | Strain 630,BHI | Strain 630,Basal Medium | Strain 630,Faecal water+ | Strain 630,HPUra+ | Strain 630,Lag | Strain 630,Log | Strain 630,Log,BHI | Strain 630,Sporulating | TW11 | UK1 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CCL16956 (BN171_1030006) | -1.9 | -4.46 | -0.73 | -2.65 | -0.77 | 0.49 | 0.44 | -2.21 | -2.95 | 1.65 | 1.09 | 1.31 | 1.5 | 0.02 | -3.11 | 2.17 | 0.31 | -1.0 | -0.81 | -4.05 | -4.38 | -6.78 | -0.69 | -2.32 | -0.75 | -4.47 | -2.97 | 0.48 | 1.4 |
CCL17136 (BN171_1300001) | 1.24 | -1.19 | 0.39 | -1.93 | -1.03 | 0.36 | -0.95 | 0.01 | 0.05 | 0.23 | 0.11 | 0.18 | 0.37 | 0.48 | -1.67 | 0.76 | -0.22 | -0.5 | -0.26 | 0.5 | -1.42 | 0.76 | -0.0 | 0.14 | -0.05 | -0.76 | -2.63 | 0.57 | 0.06 |
CCL17158 (BN171_1330019) | -3.81 | -3.31 | -3.38 | -3.2 | -6.13 | 2.08 | 0.19 | -4.66 | 0.98 | 0.32 | -0.01 | 0.26 | 1.45 | -3.33 | -4.52 | 1.55 | -0.71 | -4.33 | 0.22 | -1.2 | -1.58 | - | 1.28 | -0.2 | 0.72 | -2.51 | -1.63 | 1.42 | 0.37 |
CCL17246 (BN171_1410008) | 0.29 | -1.09 | 0.21 | -0.1 | 0.32 | -0.44 | 0.39 | -0.82 | -1.11 | 0.34 | 0.73 | 0.26 | 0.01 | 0.6 | -0.86 | 0.09 | -0.03 | 0.03 | -0.62 | 0.74 | 0.6 | -0.8 | -0.01 | -0.67 | -0.14 | 0.23 | -2.39 | -0.26 | 0.58 |
CCL17356 (xseB) | -2.12 | -2.82 | -0.6 | -1.11 | 0.09 | 0.27 | 0.69 | -1.95 | 0.11 | 1.3 | 0.94 | 0.7 | 0.04 | 0.3 | -1.95 | -0.18 | -0.18 | -1.64 | 0.23 | 0.88 | -0.73 | -4.64 | 1.02 | -0.24 | 0.28 | -1.13 | -1.97 | 0.43 | 0.92 |
CCL17507 (BN171_1520025) | -1.11 | -0.94 | -0.92 | -1.04 | -1.3 | -0.05 | 0.35 | -1.6 | 1.12 | 1.14 | 0.85 | 0.81 | 1.02 | -1.07 | -1.16 | 0.53 | -0.27 | -1.21 | -0.13 | -0.33 | -0.66 | -0.85 | 0.36 | 0.51 | 0.37 | -1.61 | -0.93 | -0.01 | 0.77 |
CCL17519 (BN171_1520037) | -0.85 | -3.03 | -0.39 | -1.72 | -1.45 | 0.35 | 0.44 | -2.55 | 0.03 | 0.65 | 0.24 | 0.49 | 1.03 | -0.1 | -2.37 | 1.19 | -0.16 | -1.27 | 0.7 | -0.14 | -1.39 | -1.57 | 0.92 | 0.34 | 0.9 | -1.09 | -2.49 | 0.91 | 0.43 |
CCL17571 (BN171_1570004) | 0.66 | -0.73 | 0.8 | -0.42 | -0.56 | 0.35 | -0.05 | -0.75 | 0.01 | -0.32 | -0.42 | -0.32 | 0.47 | 0.66 | -0.82 | 1.19 | -0.35 | -0.16 | -0.63 | 0.96 | -0.42 | -0.82 | 0.07 | 0.05 | -0.14 | -0.84 | -1.62 | 0.61 | -0.61 |
CCL17578 (BN171_1590002) | -1.55 | -3.4 | -1.24 | -1.57 | -1.42 | 0.22 | 0.98 | -3.32 | 1.02 | 1.05 | 0.63 | 0.69 | 1.02 | -0.88 | -2.17 | 1.13 | -0.38 | -1.52 | -0.12 | -0.74 | -1.25 | -0.91 | 0.4 | 0.77 | 0.62 | -2.53 | -1.49 | 0.91 | 0.47 |
CCL17579 (BN171_1590003) | -1.71 | -3.19 | -1.04 | -1.05 | -0.86 | -0.57 | 1.18 | -3.99 | -0.46 | 1.26 | 0.79 | 1.12 | 1.2 | -0.93 | -2.07 | 1.57 | 0.32 | -1.49 | 0.11 | -0.59 | -0.93 | -1.77 | 0.36 | -0.39 | -0.14 | -1.78 | -1.17 | 0.6 | 0.71 |
CCL17580 (ddl) | -2.95 | -3.75 | -2.65 | -2.53 | -1.96 | -0.07 | 1.0 | -2.46 | -2.56 | 1.51 | 1.06 | 1.45 | 1.1 | -2.72 | -2.77 | 1.73 | 0.63 | -1.92 | 0.01 | -1.73 | -2.68 | -1.31 | -0.24 | -1.87 | 0.38 | -1.83 | -0.18 | 0.98 | 1.17 |
CCL17623 (BN171_1640013) | 0.56 | -2.08 | 0.82 | -0.06 | -0.03 | 0.15 | -0.45 | -0.99 | 0.22 | -0.04 | -0.06 | -0.02 | 0.63 | 1.27 | -1.68 | 1.1 | -0.12 | -0.69 | 0.05 | 0.46 | -1.26 | -1.7 | 1.02 | -0.79 | -0.35 | -1.09 | -1.34 | -0.25 | -0.04 |
CCL17672 (BN171_1670004) | -0.35 | -0.36 | -0.21 | 0.48 | -0.34 | -1.4 | 0.66 | -0.14 | -1.35 | -0.22 | -0.6 | 0.27 | 1.46 | -0.16 | -0.02 | 2.26 | 0.26 | 0.1 | -1.51 | -0.67 | -0.08 | -0.6 | -1.14 | -0.89 | -0.22 | -1.25 | -1.63 | -0.24 | -0.49 |
CCL17720 (BN171_1720001) | -4.16 | -4.57 | 1.0 | -1.83 | -1.34 | 0.03 | 0.54 | -4.84 | -1.79 | 0.32 | -0.04 | 0.31 | 0.42 | -0.57 | -4.33 | 1.4 | -0.1 | -3.71 | -0.4 | 2.25 | -0.63 | -2.53 | 1.02 | -0.3 | 0.05 | -1.7 | 0.11 | 0.78 | -0.11 |
CCL17741 (BN171_1750002) | -0.16 | -0.62 | -0.49 | 0.56 | -0.27 | -1.77 | 1.51 | -0.16 | -0.65 | 0.9 | 0.36 | 0.54 | 0.67 | -0.37 | -0.07 | 0.38 | -0.46 | -0.37 | -0.07 | -0.8 | -0.51 | -0.01 | -0.25 | -0.16 | -0.2 | -0.93 | -2.23 | 0.32 | 0.3 |
CCL17808 (BN171_1810015) | -0.54 | -0.67 | 0.1 | 1.15 | 0.31 | -1.35 | -0.25 | -1.65 | 0.93 | 0.16 | -0.39 | -0.35 | 0.76 | -0.38 | 0.14 | 0.56 | -0.56 | -0.39 | -0.07 | -0.23 | -0.04 | 0.44 | 0.63 | 0.67 | 0.34 | -1.18 | -1.55 | -0.74 | -0.66 |
CCL17809 (BN171_1810016) | -0.75 | -0.69 | -0.19 | 0.9 | -0.04 | -1.72 | 1.24 | -0.93 | -0.57 | 0.42 | 0.71 | 1.07 | 0.84 | -0.9 | -0.11 | -0.29 | -0.27 | -0.38 | 0.07 | -1.38 | -0.42 | -1.13 | 0.98 | 0.75 | -0.66 | -2.46 | -1.85 | -0.6 | 0.51 |
CCL17847 (BN171_1840007) | -4.08 | -6.04 | -1.99 | -2.11 | -2.37 | 0.25 | 1.01 | -5.42 | -2.31 | 1.52 | 1.5 | 1.63 | 0.83 | -2.17 | -4.33 | 1.26 | -0.29 | -3.33 | -0.04 | -2.18 | -1.77 | -2.72 | 0.48 | -0.49 | -0.12 | -4.43 | -1.91 | 1.09 | 1.82 |
CCL17920 (BN171_1940009) | -4.05 | -5.16 | -1.28 | -1.5 | -2.36 | 0.5 | 0.5 | -4.47 | 0.88 | 0.69 | 0.62 | 0.55 | 1.47 | -1.15 | -2.83 | 2.04 | -0.14 | -3.39 | 0.33 | -0.44 | -0.32 | -4.72 | 0.29 | 0.41 | 0.31 | -2.87 | -3.11 | 0.74 | 0.71 |
CCL17921 (mobA) | -1.2 | -3.15 | -0.31 | 0.89 | -0.63 | 0.85 | 0.43 | -3.29 | -1.51 | 0.23 | -0.03 | 0.13 | 0.69 | -0.66 | -0.17 | 1.18 | 0.18 | -1.25 | 0.02 | 0.47 | 1.0 | -2.17 | -0.05 | 0.18 | 0.21 | -0.16 | -2.04 | 0.48 | -0.1 |
CCL17922 (BN171_1940011) | -0.93 | -4.04 | -0.39 | -0.7 | -1.19 | 1.43 | 0.19 | -3.32 | -0.29 | 0.48 | 0.19 | 0.78 | 1.07 | -0.67 | -2.02 | 1.44 | -0.64 | -1.84 | 0.34 | -0.33 | -0.7 | -2.86 | 0.69 | 0.44 | 0.91 | -1.26 | -2.66 | 0.39 | 0.49 |
CCL18042 (terD) | -0.83 | 0.1 | -0.8 | -0.4 | -0.59 | 0.83 | 0.48 | -0.28 | -0.8 | 0.89 | 0.25 | 0.58 | 0.92 | -1.16 | -0.32 | 1.13 | 0.03 | -0.29 | 0.1 | -0.32 | -0.33 | -1.32 | -0.33 | -0.1 | 0.35 | -0.49 | -1.5 | -0.24 | 0.16 |
CCL18057 (BN171_2090001) | -1.28 | -3.25 | 0.07 | -1.52 | -1.05 | 1.33 | 0.76 | -4.02 | -1.03 | 1.17 | 0.46 | 0.85 | 0.94 | 0.4 | -2.73 | 1.29 | -1.24 | -2.18 | 0.27 | 0.63 | -1.29 | -2.89 | 0.66 | -0.65 | -0.15 | -1.91 | -2.66 | -0.24 | 1.16 |
CCL18141 (BN171_2120001) | -0.09 | -0.21 | -0.39 | -0.27 | -1.38 | 0.48 | 0.42 | -1.13 | 0.11 | 0.4 | 0.33 | 0.17 | 0.76 | -0.5 | -0.54 | 0.66 | -0.65 | -0.45 | -0.38 | 0.38 | -0.08 | -0.74 | -0.22 | 0.45 | 0.79 | -0.7 | 0.01 | 0.31 | -0.34 |
CCL18402 (BN171_2290007) | 0.14 | -2.62 | 0.77 | -1.02 | -0.68 | -0.14 | 1.04 | -1.53 | -1.27 | 0.74 | 0.67 | 0.18 | 0.73 | 1.23 | -2.25 | 1.06 | -0.87 | -0.79 | -0.03 | 0.74 | -0.44 | -2.63 | 0.62 | -0.95 | -0.07 | -1.1 | -2.69 | -0.26 | 0.45 |
CCL18585 (BN171_2440026) | -0.77 | -1.37 | -0.66 | 0.09 | -0.42 | -0.17 | 0.8 | -2.06 | 0.44 | 0.91 | -0.08 | -0.77 | 0.95 | -1.39 | -1.36 | 1.04 | -0.44 | -1.26 | -0.15 | -0.12 | -0.11 | 0.77 | 0.86 | 0.52 | 0.59 | -1.17 | -0.99 | 0.02 | -0.22 |
CCL18604 (cynT) | 0.79 | -0.76 | 0.94 | -0.6 | -0.34 | -1.01 | 0.97 | -0.97 | -0.58 | 0.43 | 0.13 | 0.23 | 0.26 | -0.2 | -1.29 | 1.17 | -1.41 | -0.5 | -1.05 | 1.36 | -0.5 | -1.89 | -0.5 | 0.36 | 0.22 | -0.41 | -0.27 | -0.37 | -0.5 |
CCL18632 (BN171_2480007) | -0.29 | -2.22 | -0.24 | -0.03 | -0.26 | -0.69 | 0.27 | -1.27 | -0.23 | 0.96 | 0.58 | 0.58 | 0.86 | -0.36 | -1.65 | 1.35 | -0.4 | -0.35 | -0.48 | -0.42 | -0.96 | -1.22 | 0.33 | 0.35 | 0.59 | -0.39 | -3.08 | 0.58 | 0.55 |
CCL18633 (BN171_2480008) | -1.09 | -2.44 | -0.58 | -0.44 | -0.87 | 0.1 | 0.52 | -1.63 | 0.23 | 0.85 | 0.59 | 0.52 | 0.98 | -0.46 | -1.82 | 1.45 | -0.57 | -0.91 | -0.35 | -0.46 | -1.3 | -1.46 | 0.45 | 0.61 | 0.77 | -0.92 | -2.67 | 0.81 | 0.47 |
CCL18634 (BN171_2480009) | -0.11 | -0.46 | 0.51 | 1.12 | 0.25 | -0.46 | 0.13 | -0.42 | 0.6 | 0.26 | 0.37 | 0.19 | 0.75 | 0.43 | -0.4 | 0.94 | -0.48 | -0.21 | -0.58 | -0.36 | -0.77 | -0.17 | -0.21 | -0.92 | -1.02 | -0.41 | -2.71 | 0.07 | -0.35 |
CCL18671 (BN171_2480046) | -1.02 | -1.98 | -0.59 | -1.61 | -0.44 | 1.13 | 0.59 | -1.5 | -2.21 | 1.01 | 0.79 | 0.78 | 0.54 | -0.34 | -2.54 | 0.78 | -0.94 | -0.91 | -0.3 | 0.26 | -1.28 | -1.66 | 0.23 | -0.69 | 0.21 | 0.13 | -1.71 | 1.42 | 0.88 |
CCL18681 (BN171_2480056) | -0.51 | -3.82 | 0.74 | -0.08 | 0.08 | -0.2 | 0.33 | -2.48 | -0.93 | 1.1 | 0.54 | 0.79 | 0.09 | 0.72 | -3.13 | 0.81 | -0.83 | -0.64 | -0.24 | 0.84 | -0.11 | -1.69 | 0.8 | -1.43 | -0.07 | -0.77 | -2.0 | 0.38 | 0.62 |
CCL18724 (BN171_2590012) | -0.85 | -0.37 | -0.59 | 0.16 | -0.69 | -0.11 | 0.91 | -0.81 | -0.04 | 1.11 | 0.77 | 0.82 | 0.44 | -0.36 | -0.21 | 0.19 | -0.48 | -0.49 | -0.21 | -0.74 | -0.79 | -0.23 | -0.17 | -0.47 | -0.37 | -1.47 | -1.25 | 0.99 | 0.74 |
CCL18765 (BN171_2610005) | -0.69 | -2.34 | -0.24 | -1.62 | -0.99 | 0.27 | 0.44 | -1.9 | -0.62 | 1.18 | 0.6 | 0.77 | 1.46 | -0.62 | -1.77 | 2.0 | -0.18 | -1.03 | -0.72 | -0.13 | -1.62 | -1.3 | -0.46 | 0.56 | 0.52 | -1.94 | -1.94 | -0.03 | 0.11 |
CCL18803 (BN171_2640002) | 0.17 | -1.2 | 0.14 | -0.4 | -0.39 | 0.53 | 0.2 | -1.25 | -0.47 | 0.23 | 0.31 | 0.21 | 0.49 | 0.37 | -1.18 | 1.05 | -0.43 | -0.48 | -0.12 | 0.58 | -0.82 | -0.53 | 0.44 | -0.2 | 0.27 | -0.49 | -0.87 | 0.59 | -0.03 |
CCL18804 (polC) | -1.31 | -3.74 | 0.1 | -0.91 | -0.47 | 0.28 | 0.45 | -3.18 | 0.05 | 0.8 | 0.99 | 0.88 | 0.54 | 0.13 | -2.12 | 1.13 | -0.63 | -1.45 | -0.32 | 0.86 | -0.23 | -2.26 | 0.42 | -0.5 | 0.03 | -0.9 | -1.49 | 0.76 | 0.67 |
CCL18831 (BN171_2670013) | -0.73 | -0.96 | -0.46 | -0.52 | -0.57 | 0.73 | 0.56 | -1.43 | -1.3 | 0.73 | -0.25 | 1.04 | 0.62 | -0.85 | -2.0 | 1.14 | -0.79 | -0.84 | 0.14 | 0.48 | -0.12 | -0.43 | -0.1 | -0.55 | -0.58 | -0.52 | -0.91 | 1.78 | -0.91 |
CCL18844 (glyS) | 0.04 | -0.64 | -0.22 | -0.76 | -0.62 | -0.54 | 0.11 | -0.9 | -1.55 | 0.84 | 0.81 | 0.67 | 0.62 | -0.35 | -0.82 | 1.03 | -0.33 | -0.63 | -0.32 | -0.2 | -0.79 | -0.32 | 0.29 | -0.43 | 0.36 | -1.01 | -0.05 | 0.74 | 0.7 |
CCL18849 (BN171_2690006) | -0.39 | -1.26 | -0.48 | -0.67 | -0.8 | 0.2 | 1.08 | -1.67 | -1.89 | 0.93 | 0.82 | 0.7 | 0.51 | -0.39 | -1.12 | 0.77 | -0.74 | -0.9 | -0.01 | -0.04 | -0.61 | 0.07 | 0.7 | -0.33 | 0.2 | -0.78 | -0.84 | 0.53 | 0.54 |
CCL18959 (BN171_2770010) | -0.34 | -0.33 | -0.68 | 0.09 | -0.38 | -0.62 | 1.11 | -0.41 | -0.12 | 0.55 | 0.62 | 0.7 | 0.45 | -1.21 | -0.43 | 0.78 | -0.54 | -0.44 | -0.03 | -1.22 | -0.44 | 0.3 | 0.39 | 0.55 | 0.21 | -1.37 | -1.19 | -0.31 | 0.29 |
CCL19127 (BN171_2870057) | -3.96 | -8.1 | -0.63 | -1.0 | -1.72 | 0.23 | -0.16 | -6.35 | 1.87 | 0.93 | 0.32 | 0.01 | 0.69 | -1.23 | -4.22 | 0.33 | -1.68 | -3.36 | 0.75 | -1.11 | -1.98 | -0.92 | 1.5 | 1.31 | 1.2 | -2.71 | -2.15 | 1.1 | -0.31 |
CCL19156 (hpt) | -1.77 | -5.03 | -1.12 | -2.49 | -0.83 | -0.17 | 0.24 | -2.95 | -1.51 | 0.94 | 1.36 | 1.15 | 0.83 | -0.99 | -3.67 | 1.4 | 0.18 | -1.64 | -0.47 | -0.43 | -2.13 | -2.94 | 0.38 | 0.38 | 0.72 | -1.14 | -2.6 | 1.13 | 1.54 |
CCL19306 (BN171_3020018) | 0.07 | -1.03 | 0.27 | -0.86 | -0.4 | -0.43 | 0.29 | -0.48 | -2.19 | 1.12 | 1.21 | 0.43 | -0.15 | 0.02 | -1.17 | 0.27 | -0.52 | -0.02 | -0.47 | 0.78 | -1.14 | -2.56 | 0.98 | -0.16 | 0.58 | -0.2 | -2.48 | 0.43 | 0.2 |
CCL19334 (serS) | -0.16 | -0.76 | -0.88 | 0.01 | -0.71 | 1.04 | 0.14 | -1.36 | 0.25 | 0.35 | 0.06 | -0.04 | 1.03 | -0.59 | -0.97 | 1.56 | -0.11 | -0.72 | 0.54 | -1.01 | -0.75 | -0.4 | 0.8 | -0.3 | 0.38 | -1.49 | -0.49 | -0.57 | -0.49 |
CCL19374 (BN171_3080021) | 0.23 | 0.06 | -0.09 | -0.44 | -0.05 | -0.27 | 0.66 | 0.23 | -2.25 | 0.38 | 0.32 | 0.43 | 0.74 | -0.36 | -1.86 | 1.6 | -0.21 | 0.2 | -0.86 | -0.79 | -0.88 | -3.38 | -0.16 | 0.24 | 0.23 | -0.89 | -1.22 | 0.53 | 0.3 |
CCL19893 (BN171_3590014) | -1.02 | -1.67 | -0.52 | 0.31 | -0.18 | -0.19 | -0.86 | -1.68 | 0.18 | -0.17 | -0.44 | -1.01 | 1.2 | -1.77 | -1.17 | 1.59 | -0.22 | -1.14 | 0.62 | -0.66 | 0.48 | 0.25 | 0.77 | 0.5 | 1.11 | -0.76 | -0.55 | 0.21 | -0.85 |
CCL19897 (BN171_3590018) | -1.69 | -1.7 | -0.5 | -0.35 | -0.34 | 0.64 | -1.25 | -1.67 | 0.16 | 1.05 | 0.5 | -0.08 | 1.43 | -1.07 | -1.38 | 2.03 | -0.72 | -1.15 | 0.3 | -0.01 | 0.05 | -2.05 | 0.38 | -1.06 | 0.22 | -1.1 | -2.85 | 0.24 | 0.41 |
CCL20694 (BN171_930005) | 0.49 | -1.68 | 0.31 | -0.65 | -0.33 | -0.65 | 0.35 | -1.02 | -0.99 | 0.32 | -0.06 | 0.55 | 0.99 | 0.39 | -0.76 | 1.57 | -0.61 | 0.33 | -0.36 | 0.14 | -1.25 | -0.28 | -0.12 | -0.7 | 0.74 | -0.88 | -2.26 | 0.25 | -0.04 |
CCL20695 (BN171_930006) | 0.7 | -0.67 | 0.86 | 0.3 | 0.39 | 0.17 | -0.0 | 0.05 | -2.74 | -0.3 | -0.7 | -0.22 | 0.29 | 0.85 | -0.19 | 1.1 | -0.7 | 0.73 | -0.69 | 0.64 | -0.81 | -0.05 | -0.78 | -1.24 | -0.15 | -0.15 | -1.83 | -0.06 | -0.5 |
CCL20696 (BN171_930007) | 0.07 | -2.25 | -0.0 | -0.9 | -0.18 | -0.09 | 0.68 | -1.38 | -2.13 | 0.6 | 0.58 | 0.85 | 0.81 | 0.47 | -1.9 | 1.39 | -1.27 | -0.25 | 0.07 | 0.66 | -0.96 | -1.18 | 0.4 | -0.61 | 0.51 | -0.55 | -2.4 | -0.11 | 0.36 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.