Heatmap: Cluster_36 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL16916 (recF)
-2.13 -4.32 -1.6 -2.65 -1.82 -0.2 1.13 -3.73 -2.86 1.4 1.37 1.32 1.43 -1.06 -3.39 1.51 -0.53 -2.24 0.55 -1.15 -2.3 -0.93 0.33 -0.71 0.57 -2.5 -2.5 0.29 1.24
CCL17004 (BN171_1070006)
-0.43 -1.13 -0.47 -2.01 0.09 -1.19 -0.09 0.74 0.5 0.76 1.11 0.99 1.07 -0.64 -1.8 -0.22 0.02 0.03 -0.48 -0.24 -2.75 0.56 -0.83 0.61 0.19 -0.61 -2.55 -1.6 0.99
CCL17005 (BN171_1070007)
-1.14 -2.03 -1.2 -2.36 -0.45 -1.24 0.24 -0.55 -0.34 1.25 1.43 1.33 1.11 -1.08 -2.5 0.14 -0.01 -0.62 -0.49 -0.72 -2.94 0.41 -0.8 0.83 0.43 -0.96 -2.07 -0.71 1.53
CCL17008 (BN171_1070010)
-7.06 -6.82 -6.65 -6.62 -7.52 -2.61 1.94 -6.57 0.87 1.87 1.37 1.33 1.97 -5.63 -6.93 0.46 -0.94 -6.92 0.21 -6.66 -5.57 -1.62 1.11 -1.79 -3.09 -8.57 -1.02 0.01 1.55
CCL17016 (BN171_1080008)
-0.72 -2.89 0.68 0.27 -0.24 -0.27 0.22 -2.42 0.13 1.64 0.22 0.88 0.92 -0.04 -2.51 1.12 -0.88 -1.57 0.42 0.57 -0.66 -1.08 0.1 0.03 -0.18 -1.33 -3.67 -0.01 -0.45
CCL17017 (BN171_1080009)
-1.03 -2.34 -0.2 -0.49 -0.96 0.2 1.37 -2.0 -0.19 1.14 1.11 1.32 0.83 -0.78 -2.21 1.23 -1.26 -1.86 0.6 -0.5 -1.51 -1.38 0.22 0.24 -0.25 -1.6 -2.46 0.11 0.2
CCL17062 (BN171_1170004)
-2.97 -3.95 0.79 -0.65 -0.54 -0.17 1.27 -3.89 -0.86 1.14 0.76 1.12 0.85 -0.86 -2.63 0.82 -0.93 -2.18 -0.54 0.56 0.55 -3.56 0.21 -0.36 -0.35 -1.69 -3.09 0.74 1.14
CCL17198 (BN171_140001)
-3.93 -4.98 -2.15 -4.54 -2.93 0.5 1.42 -4.2 0.22 1.58 1.28 1.44 1.6 -1.14 -4.72 1.72 -1.21 -4.2 0.72 -1.98 -3.24 -3.37 0.5 -2.65 -0.91 -3.98 -3.04 -0.15 1.31
CCL17235 (BN171_1400007)
-0.5 -0.95 -0.47 -1.25 -1.01 -1.04 1.29 -1.16 1.46 0.97 0.39 0.87 1.04 -0.43 -1.57 0.81 -0.07 -0.8 -1.02 -0.15 -1.01 0.14 -0.69 -0.59 -0.2 -0.98 -0.14 -0.36 0.21
CCL17277 (BN171_1430004)
-1.21 -0.55 0.44 1.47 0.02 -1.54 -0.45 -0.38 0.45 -1.06 -0.21 -0.04 1.66 -1.17 -0.54 1.34 0.38 -0.68 -0.73 -0.95 -1.1 -0.39 -0.69 0.24 0.29 -1.64 -0.66 0.33 -0.19
CCL17325 (BN171_1440009)
-2.27 -4.4 -1.55 -2.38 -1.72 -0.85 1.53 -3.92 -0.31 2.05 0.98 1.03 1.65 -1.76 -3.46 0.77 -0.26 -2.48 -0.49 -1.23 -2.37 -1.56 0.71 -0.37 -0.14 -2.36 -1.69 1.23 0.43
CCL17390 (BN171_1480002)
0.91 -0.39 0.37 -0.2 -0.56 -1.56 0.59 0.02 0.84 0.72 0.21 0.09 1.54 0.58 -0.97 1.8 1.3 -0.39 -1.27 -1.29 -2.54 - -0.97 -1.68 -1.51 -1.84 -2.76 - -0.33
CCL17424 (BN171_150011)
-1.86 -2.93 -1.32 -2.05 -1.88 -1.77 1.82 -3.46 -1.01 2.36 2.06 1.71 0.71 -1.36 -2.61 -0.15 -2.52 -2.11 -0.54 -1.14 -0.42 -2.39 -0.75 -0.16 -0.55 -2.59 -2.41 -0.97 1.04
CCL17503 (BN171_1520021)
-1.89 -0.68 -1.83 -0.82 -1.97 -0.48 1.3 -2.26 0.52 1.45 1.31 1.17 0.59 -1.72 -0.4 0.51 -0.24 -1.54 0.07 -1.11 -0.26 -0.56 -0.43 -0.48 -0.09 -2.34 -0.29 -0.44 1.24
CCL17593 (BN171_160009)
-1.88 - - - - - 2.51 - - 1.94 0.68 2.45 0.52 - - - -1.04 - -2.14 - - - - - - - -5.05 -0.63 3.22
CCL17600 (BN171_1600004)
-3.25 -5.56 -3.21 -4.57 -5.0 0.16 1.77 -4.97 -4.07 1.49 1.81 1.37 1.37 -1.83 -5.39 2.21 -2.03 -3.92 -1.13 -4.54 -4.2 -4.44 0.33 -3.19 -2.54 -6.98 -1.96 -0.98 2.16
CCL17603 (BN171_1600007)
-1.11 -2.63 -0.53 -0.4 -0.99 -1.58 0.78 -2.92 0.71 -0.41 0.29 0.11 1.84 -0.56 -2.07 1.2 0.04 -1.69 -0.17 -1.39 -1.56 -1.71 1.26 0.97 -0.05 -2.71 -0.76 1.29 -0.02
CCL17645 (BN171_1640035)
-1.98 -1.58 -6.16 -6.58 -7.55 -4.88 2.29 -2.7 -0.68 1.97 1.91 2.07 0.51 -1.08 -2.22 -3.26 1.54 -2.54 -2.66 -3.88 -3.57 -6.54 -4.69 -2.72 -3.47 -7.23 -4.25 -5.1 2.26
CCL17711 (cfa)
-0.23 -1.83 -0.57 -1.82 -1.96 -0.67 -0.61 -2.52 1.47 -0.39 -0.37 -0.74 1.31 -0.31 -1.14 0.57 -1.49 -1.08 0.3 -0.44 -1.62 2.35 -0.38 1.67 0.06 -2.44 -0.78 -0.83 -0.97
CCL17715 (BN171_1700002)
-1.23 -0.9 -0.53 -0.13 -0.42 -0.41 0.77 -1.44 -0.17 0.93 0.5 0.77 0.65 -0.73 -0.46 0.09 -0.52 -0.68 -0.08 -0.57 0.12 0.49 0.25 0.81 0.09 -1.34 -0.26 0.23 0.17
CCL17760 (sigV)
-0.65 -0.31 -0.88 -1.34 -1.41 0.51 1.08 -0.8 -0.92 1.41 0.95 1.22 1.24 -0.27 -1.11 0.75 -0.37 -0.8 -0.26 -0.36 -1.36 -1.85 -0.05 -0.16 -0.17 -1.68 -2.56 -0.97 0.99
CCL17761 (BN171_1770005)
-1.37 -2.09 -0.67 -1.48 -1.29 -0.02 1.22 -2.65 -1.54 1.44 1.29 1.38 1.39 -0.19 -2.02 1.21 -0.3 -1.41 -0.29 -1.27 -1.87 -1.69 0.28 -0.25 -0.21 -2.67 -2.57 -0.54 1.27
CCL17802 (BN171_1810009)
-4.43 -2.1 -1.84 -1.0 -1.84 -3.25 1.85 -4.08 0.73 1.69 1.48 1.22 1.43 -2.54 -2.39 1.38 1.11 -3.94 -1.13 -4.03 -3.37 -2.27 -1.89 -1.27 -0.73 -6.39 0.57 -0.85 0.87
CCL17803 (BN171_1810010)
-2.83 -3.81 -0.71 -0.91 -1.46 -0.47 2.11 - 0.34 1.53 1.53 1.55 0.93 -1.05 -2.55 0.92 -0.39 -3.1 -0.56 -3.06 -1.48 - -0.05 -0.6 -0.06 -1.74 -0.36 -0.58 0.53
CCL17855 (BN171_1840015)
-1.53 -0.45 -1.76 -0.25 -1.26 -0.99 0.98 -1.14 0.41 1.82 1.4 1.68 0.73 -1.19 -0.72 0.9 -0.36 -1.16 -1.02 -1.04 -0.37 -1.86 -1.37 -0.77 -0.45 -1.24 -2.0 -1.26 1.09
CCL17947 (BN171_1970016)
-1.38 -1.31 -1.15 -1.61 -1.26 0.32 1.2 -1.21 -0.53 1.16 0.97 1.15 1.27 -0.52 -1.17 1.44 -0.26 -0.76 -0.78 -0.88 -1.0 -1.25 -0.82 0.23 0.05 -1.98 -3.65 -0.68 1.31
CCL17972 (BN171_1990001)
-1.58 -2.07 0.03 0.87 -0.67 -2.52 -0.07 -3.47 3.04 0.06 -0.29 -0.5 1.47 -2.08 -2.05 0.17 1.67 -2.25 -0.93 -2.38 -1.93 -2.71 -0.42 -0.21 -0.98 -3.47 -2.45 -0.11 -0.49
CCL17973 (BN171_1990002)
-0.61 -1.38 1.24 2.95 1.24 -3.83 -0.73 -2.77 1.66 -0.46 -0.87 -0.91 1.01 -0.72 -0.8 -1.09 0.72 -1.66 -1.34 -1.69 -0.6 -4.15 -0.9 -1.62 -1.9 -2.41 -3.25 -0.65 -0.65
CCL17974 (BN171_1990003)
-3.35 -5.98 -1.5 0.29 -2.01 -3.45 0.43 -6.82 2.47 0.82 -0.2 0.61 2.69 -2.48 -4.51 0.53 1.19 -4.1 -1.02 -5.12 -1.96 -1.95 -0.34 -1.69 -1.87 -5.66 -2.44 0.24 0.74
CCL17975 (BN171_1990004)
-2.45 -3.07 -0.17 1.36 -0.57 -2.13 -0.08 -5.71 1.73 0.7 0.09 0.34 2.77 -1.93 -3.03 0.48 1.29 -3.93 -0.83 -3.13 -1.69 -2.0 -0.13 -1.39 -1.5 -5.05 -2.28 0.01 -0.22
CCL17978 (BN171_1990007)
-4.07 -5.62 -1.24 -0.18 -2.09 -0.28 1.62 -5.52 0.26 1.75 1.29 1.47 1.71 -3.2 -4.39 0.92 0.01 -3.76 -0.03 -5.0 -2.66 -3.79 0.48 -1.33 -0.78 -5.35 -2.4 0.72 0.87
CCL18055 (BN171_2080001)
-6.97 - -5.62 - -7.97 -0.86 1.84 -6.6 -2.41 1.97 2.03 1.56 1.46 -5.0 -7.62 1.15 -1.33 -5.76 -0.22 -6.86 -6.62 -5.5 0.06 -1.83 -1.55 - -6.1 0.68 2.03
CCL18107 (BN171_210043)
-5.36 -5.22 -2.14 -2.14 -2.23 -5.75 1.22 -5.3 -1.49 2.6 2.14 1.01 1.08 -2.48 -3.42 0.81 0.73 -2.41 -1.03 -6.48 -4.99 -6.5 -1.66 -0.42 -0.15 -7.45 -1.91 -2.19 2.03
CCL18186 (BN171_2140028)
-1.01 -1.33 -0.84 -0.34 -0.37 -0.14 0.4 -0.94 0.3 0.48 0.42 0.54 1.14 -1.33 -1.13 0.62 0.08 -0.49 0.07 -0.82 -1.16 1.25 -0.01 0.44 -0.02 -0.91 -0.94 0.41 0.37
CCL18218 (BN171_2170005)
-1.69 -4.64 -0.58 -0.03 -0.89 -1.59 1.3 -5.24 1.32 1.22 1.55 0.93 1.79 -0.58 -3.43 0.41 -0.46 -2.59 -0.17 -1.55 -1.65 -1.85 0.0 -0.5 -0.76 -3.62 -2.37 0.54 0.74
CCL18358 (BN171_2230008)
0.74 -4.54 -0.35 -2.8 -3.48 -0.23 0.97 -4.98 -2.8 2.42 1.79 1.05 1.88 0.38 -5.11 1.04 -1.67 -4.42 -2.25 -3.73 -4.72 -4.44 -2.75 -3.96 -3.84 -4.99 -2.59 -0.4 1.75
CCL18382 (BN171_2270005)
-3.7 -5.66 -1.5 -3.0 -2.59 -0.09 0.96 -5.06 -0.44 1.91 1.45 1.53 1.52 -2.22 -4.63 1.29 0.52 -3.25 -0.44 -3.97 -3.48 -5.18 0.56 -0.44 0.74 -5.71 -1.47 -0.44 1.15
CCL18458 (BN171_2350010)
0.0 -2.53 -0.08 -0.74 -0.41 -0.89 -1.11 -0.29 -1.96 -1.13 0.81 -2.23 1.05 0.6 -2.43 1.06 -1.59 0.26 -0.01 0.45 -1.79 1.04 -0.28 1.05 0.38 -0.32 -0.57 -0.04 1.2
CCL18547 (BN171_2420014)
-4.1 -4.98 -6.01 -4.67 - -0.5 0.83 -4.69 -2.49 2.14 2.19 1.37 1.13 -3.81 -5.71 1.28 -0.5 -4.34 -0.68 -4.36 -5.8 -2.59 -0.16 -1.02 -1.56 -6.16 -2.41 -0.4 2.49
CCL18640 (BN171_2480015)
-0.25 -3.0 0.3 -1.2 -0.65 -0.42 0.53 -2.51 -1.07 0.57 0.61 0.23 1.04 0.16 -2.0 1.5 0.04 -1.52 -0.72 1.26 -0.89 -0.67 -0.58 0.18 0.6 -1.27 -1.13 0.34 0.54
CCL18695 (BN171_2520002)
-2.45 -2.52 0.22 0.49 -0.43 0.29 0.86 -3.42 1.67 0.99 0.69 0.57 1.25 -1.3 -0.61 -0.24 0.24 -1.54 0.36 -2.53 -2.81 0.38 0.64 0.07 -0.23 -2.85 -0.17 - -0.41
CCL18764 (BN171_2610004)
-1.31 -3.06 -1.21 -1.87 -1.06 -0.22 0.92 -2.07 -0.2 1.82 1.41 1.54 0.67 -1.03 -2.05 1.56 -0.23 -0.93 -0.85 -0.75 -1.91 -1.51 -0.77 -0.11 0.03 -1.32 -3.09 -0.99 1.26
CCL18847 (recO)
-2.01 -2.35 -2.1 -2.82 -3.36 -0.21 1.75 -3.01 -1.9 1.5 1.23 1.15 1.33 -1.6 -3.02 0.82 -0.48 -2.91 0.02 -1.97 -2.38 -3.07 0.72 -0.65 -0.13 -3.31 0.24 1.05 1.23
CCL18852 (BN171_2690009)
-1.57 -1.68 -2.3 -2.05 -2.6 -0.92 1.48 -1.95 -0.2 1.06 1.09 0.85 1.04 -1.97 -1.59 0.99 -0.61 -1.29 -0.24 -1.93 -1.86 0.41 0.11 0.56 0.79 -2.02 -0.81 0.7 1.1
CCL18898 (BN171_2710003)
-3.39 -4.65 -2.03 -2.83 -2.2 0.5 1.05 -2.93 -1.53 1.12 1.3 1.66 1.21 -2.1 -4.0 1.8 -0.67 -2.72 -0.76 -2.29 -2.99 -2.8 0.69 0.0 -0.7 -2.41 -0.26 -0.63 1.87
CCL19025 (BN171_2800004)
-0.28 -0.02 0.3 1.65 0.27 -1.84 0.13 -1.63 1.53 -0.28 -0.52 -0.82 1.31 -0.56 -0.33 0.04 -0.35 -1.12 -0.89 0.01 0.81 -0.02 -0.01 -0.51 -1.05 -1.43 -0.67 -0.23 -1.31
CCL19026 (BN171_2810001)
-4.48 -4.35 -3.62 -3.4 -4.23 -1.68 1.85 -4.62 -0.97 2.31 1.98 1.52 0.85 -3.23 -3.41 0.67 -0.13 -4.4 -0.33 -3.16 -1.76 -3.21 -0.03 -1.29 -1.3 -3.55 -2.09 0.66 1.51
CCL19074 (BN171_2870004)
-0.59 0.19 -0.15 0.17 -0.27 -0.14 -0.77 -0.72 -1.58 -0.42 -0.12 0.62 1.61 -0.5 0.82 1.7 -0.27 0.12 -2.01 0.06 0.03 -0.68 -4.63 -0.86 0.63 -0.24 -2.59 0.0 -0.12
CCL19137 (BN171_2880004)
-0.86 -0.77 -0.54 -0.33 -0.37 0.32 -0.17 -0.68 0.62 -0.1 -0.01 -0.13 1.37 -0.7 -0.45 0.85 -0.68 -0.52 -0.49 0.44 -0.94 -2.0 0.5 1.39 0.31 -0.2 -0.24 -0.27 -0.44
CCL19319 (BN171_3020031)
-0.61 -2.28 -0.24 0.26 -0.42 -0.35 0.12 -0.85 1.27 -0.16 0.16 -0.02 1.21 -0.87 -2.68 0.86 -0.86 -0.75 -0.23 -0.38 -1.81 1.03 0.94 0.93 0.23 -1.2 -0.75 -0.19 -0.53
CCL19320 (BN171_3020032)
-0.74 -1.71 0.05 0.28 -0.32 -1.46 0.24 -0.37 1.43 0.37 0.09 0.05 0.81 -0.22 -2.32 0.44 -0.48 -0.8 -0.53 -0.54 -1.74 1.96 0.68 0.07 -0.41 -1.22 -2.43 -0.59 -0.15
CCL19340 (BN171_3070006)
-3.66 -3.78 -0.07 0.42 -0.72 -0.2 0.61 -4.04 1.75 0.96 0.9 0.82 2.05 -2.86 -3.68 1.21 -0.32 -4.34 0.01 -2.91 -2.02 -1.03 0.22 -1.19 -1.19 -4.09 -2.22 0.59 0.41
CCL19397 (BN171_3100003)
-0.36 -1.88 -0.28 -1.78 -1.52 -0.38 1.26 -1.11 -0.2 0.54 0.54 0.49 0.94 -0.32 -1.71 1.27 -0.95 -0.67 -0.18 0.81 -1.13 0.49 0.04 0.71 -0.07 -0.54 -0.39 -0.76 -0.08
CCL19493 (BN171_3180017)
- -2.81 -4.8 -2.29 - -1.01 1.76 -5.04 -3.4 2.66 1.76 1.62 0.49 - -3.59 0.85 -0.3 -3.62 -0.45 -3.66 -1.21 -2.38 -0.19 -1.3 -2.57 -4.89 -1.9 0.44 1.63
CCL19508 (BN171_3180032)
-3.08 - - - -3.13 - -0.77 - - 1.1 2.74 2.33 2.05 -3.09 - 1.61 -0.18 - - - - - - - - - - - 2.61
CCL19540 (bglG)
-2.11 -5.07 -0.96 -3.2 -1.27 1.13 0.18 -1.23 -1.46 1.17 1.08 1.79 0.35 -1.36 -3.3 1.27 -1.3 -1.54 0.77 0.5 -2.93 -1.31 0.7 0.25 0.02 -0.35 -4.48 0.21 0.47
CCL19902 (BN171_3590023)
-0.58 -1.4 -0.49 -0.14 -0.65 0.26 -0.2 -1.38 1.34 0.36 0.1 -0.01 0.86 -0.47 -0.48 1.03 -0.62 -0.22 0.29 0.27 -0.42 -0.31 0.42 0.25 0.27 -0.04 -1.75 -0.57 -0.13
CCL19972 (BN171_3610015)
-2.94 -7.39 -1.6 -1.95 -2.35 0.98 1.02 -4.01 -1.23 1.49 1.15 0.66 1.31 -1.42 -3.4 1.97 -0.58 -2.68 0.51 -2.18 -2.25 -0.45 0.45 -0.18 0.55 -2.45 -2.11 0.49 0.19
CCL20001 (phnI)
-1.88 -1.49 -1.21 -1.03 -1.22 -0.25 0.66 -2.03 0.61 1.32 0.72 1.01 1.04 -2.35 -1.11 1.75 -0.87 -1.64 1.0 -0.3 -0.5 0.11 0.96 -0.43 0.03 -0.67 -1.25 - -1.49
CCL20002 (phnH)
-3.59 - - -3.25 - -0.28 1.4 - 1.56 1.42 0.93 1.16 1.8 - -3.49 1.81 -0.85 - 1.15 -3.53 -1.68 -1.17 1.09 0.03 0.46 - -1.39 - -
CCL20003 (phnG)
-1.53 -4.33 -1.19 -2.94 -0.58 1.06 -0.29 -3.55 1.07 -1.49 -0.57 1.2 1.09 -0.29 -2.02 1.64 -1.09 -2.17 0.59 1.17 0.68 0.47 0.6 -0.1 0.66 -0.21 -1.95 -3.98 -
CCL20141 (BN171_3700002)
-4.38 -4.35 -3.49 -2.58 -3.88 -0.59 0.98 -5.08 -5.04 1.43 1.51 2.21 1.91 -3.14 -4.38 0.95 -0.96 -4.2 -0.04 -6.0 -5.28 -4.72 0.19 -3.44 -2.79 -7.23 -3.3 0.71 2.36
CCL20272 (BN171_3990001)
-2.52 - -0.07 0.26 -1.85 - 0.88 -2.75 2.91 -1.68 2.23 1.88 1.55 -2.08 -1.71 0.31 0.25 -2.29 -5.53 - - - - - - - - - 1.05
CCL20622 (BN171_750006)
-1.46 -4.52 -1.04 -1.59 -2.4 -1.07 -0.41 -4.06 -1.56 0.66 0.6 1.31 2.35 -1.33 -2.58 2.26 -0.03 -1.4 0.24 -2.48 -3.11 - 0.27 0.63 0.47 -5.88 -2.08 -1.86 1.29
CCL20634 (cdu)
0.28 -1.3 0.1 0.01 0.17 0.07 0.12 -0.47 0.42 0.26 -0.2 -0.04 0.87 -0.45 -1.19 0.06 -0.42 -0.1 0.52 0.34 -1.49 0.77 1.18 0.55 0.13 -0.62 -1.01 -10.4 -1.07
CCL20710 (BN171_960002)
-2.5 -3.88 -1.77 -2.29 -2.08 -0.0 1.04 -3.64 -2.73 1.82 1.7 1.62 1.43 -1.49 -3.45 1.43 -0.62 -2.36 0.08 -2.43 -2.6 -2.39 0.43 -1.58 -0.28 -3.52 -3.19 0.32 1.38

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.