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Heatmap: Cluster_17 (HCCA)

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Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL16919 (BN171_10007)
 187.66 117.11 209.29 148.34 312.52 66.1 166.98 100.41 67.34 212.73 185.59 202.03 142.62 253.53 159.24 141.25 103.17 151.78 156.75 169.21 81.56 112.04 111.79 67.39 60.64 98.35 36.78 58.1 148.49
CCL16922 (rsbW)
 209.45 160.31 210.97 177.94 197.58 70.64 205.24 163.63 69.72 186.49 147.34 178.5 177.83 354.7 185.68 214.21 54.65 168.57 123.69 166.78 138.55 86.8 84.42 106.7 93.54 107.72 54.26 107.92 165.73
CCL16923 (sigB)
 140.25 112.16 113.95 98.0 113.91 75.57 232.09 128.93 73.84 257.98 195.59 228.54 204.97 142.78 112.59 253.33 78.58 117.93 106.09 85.93 66.22 157.08 74.95 134.01 108.15 65.51 64.69 122.18 193.01
CCL17000 (BN171_1070002)
 24.71 47.06 15.75 14.32 29.43 8.29 48.86 21.66 6.2 37.76 32.77 26.34 30.25 25.16 31.57 45.93 14.89 23.51 5.05 30.38 9.78 8.22 5.82 6.32 16.26 34.79 9.2 22.97 31.44
CCL17031 (BN171_1090012)
 20.54 4.44 17.13 10.47 9.79 5.04 12.88 7.2 13.58 14.03 8.16 10.81 15.06 17.93 7.46 16.35 8.02 18.05 8.62 17.54 7.27 8.02 10.4 9.88 8.81 7.39 3.42 16.88 9.39
CCL17032 (BN171_1090013)
 8.77 3.32 9.14 5.49 5.9 4.03 17.57 5.24 7.03 15.49 12.09 12.54 12.36 10.13 5.94 12.15 5.63 8.07 6.02 9.87 4.06 13.27 7.06 6.39 5.78 4.21 4.84 10.19 10.34
CCL17174 (BN171_1330035)
 9.42 3.63 9.43 9.22 14.13 1.47 12.62 10.18 1.75 8.43 8.37 9.81 12.82 8.68 3.4 16.18 4.97 8.28 3.09 1.47 1.24 4.15 11.39 3.18 1.51 1.23 2.58 3.57 9.01
CCL17175 (BN171_1330036)
 3.95 0.86 4.97 4.53 4.59 1.4 11.64 1.56 1.94 10.07 8.8 8.99 14.19 3.83 1.12 11.66 3.71 3.11 2.28 0.91 0.86 1.57 8.94 1.96 1.53 0.58 3.28 2.49 9.25
CCL17176 (BN171_1330037)
 1.69 0.98 3.64 3.49 3.74 0.71 17.75 1.39 2.66 11.01 9.33 9.19 16.62 3.8 0.9 10.86 4.53 2.03 3.05 1.8 2.46 8.5 10.11 2.92 2.89 0.46 5.29 4.13 8.2
CCL17177 (mnaA)
 6.74 3.57 6.77 10.27 7.62 2.18 20.78 3.93 4.19 7.13 6.98 10.6 13.48 5.69 3.64 9.17 4.03 5.87 3.35 2.8 5.17 10.52 7.82 3.32 3.18 1.87 4.78 2.77 7.53
CCL17278 (polA)
 88.09 31.66 66.41 37.1 54.7 44.14 113.75 43.21 22.64 85.77 68.09 72.03 93.21 91.39 31.03 101.4 35.54 53.39 30.02 44.1 20.6 44.39 40.72 38.58 44.88 28.12 44.83 23.93 59.56
CCL17280 (BN171_1430007)
 89.89 32.51 69.79 37.75 56.87 73.18 128.95 41.01 18.25 91.4 84.26 79.72 115.61 89.59 37.83 120.9 40.96 50.21 39.52 41.42 22.53 62.22 55.3 43.67 47.9 30.28 55.88 26.94 49.22
CCL17281 (BN171_1430008)
 87.62 40.23 65.0 37.54 54.02 54.18 152.7 48.93 16.28 125.12 94.13 105.76 116.51 78.37 37.24 124.11 42.94 49.88 35.55 41.75 17.27 52.37 54.6 52.04 55.73 28.57 73.95 39.54 83.97
CCL17490 (BN171_1520008)
 105.32 36.24 117.92 57.45 62.75 128.4 249.48 38.66 53.51 147.78 100.55 116.63 194.06 100.85 30.62 192.89 51.19 61.53 73.04 97.26 29.97 67.54 149.19 57.45 98.5 34.08 88.79 78.07 88.31
CCL17492 (dapG)
 311.34 103.73 230.34 147.22 159.67 190.72 353.27 128.55 18.26 213.58 161.09 184.89 224.02 186.92 87.83 266.33 78.07 183.32 106.88 209.26 58.08 290.26 167.56 94.26 167.43 133.5 115.65 102.64 143.67
CCL17493 (tepA)
 311.31 114.72 243.96 168.45 189.42 204.55 360.71 131.42 14.74 212.4 172.48 200.1 227.76 225.56 95.5 287.17 94.66 197.68 115.41 179.53 56.25 231.93 168.59 110.51 210.67 107.77 198.22 134.01 133.26
CCL17695 (BN171_1680010)
 3.4 1.62 9.88 6.97 8.25 6.18 84.13 1.24 12.5 79.08 67.1 63.66 46.39 18.17 6.79 52.17 31.04 5.91 8.89 4.38 3.35 0.26 6.84 3.71 4.92 0.58 7.14 5.61 61.04
CCL17998 (BN171_2000001)
 3.68 1.57 5.19 5.99 4.0 4.93 35.3 1.69 9.6 30.6 24.07 26.59 27.21 4.6 2.46 40.64 11.59 4.04 4.81 6.25 11.56 3.78 1.03 6.06 15.45 4.2 4.65 2.57 23.51
CCL18092 (spsI)
 31.4 19.12 60.11 69.56 66.13 0.0 48.78 21.42 21.69 134.5 94.03 56.07 56.59 37.74 40.83 53.79 47.69 57.04 2.73 0.0 0.5 0.0 0.0 0.0 0.0 0.0 0.0 25.15 73.77
CCL18093 (rmlC)
 17.14 8.84 39.71 39.4 35.88 0.0 36.0 9.76 10.88 101.11 68.03 53.27 43.7 22.47 22.61 34.88 53.42 30.13 1.74 0.0 0.25 0.0 0.0 0.0 0.0 0.0 0.0 15.35 55.95
CCL18094 (spsJ)
 26.0 13.31 56.52 78.41 68.47 0.0 36.93 11.35 14.66 89.67 65.34 45.1 54.78 36.4 43.9 60.36 36.72 51.12 1.85 0.0 0.58 0.0 0.0 0.0 0.0 0.0 0.0 20.79 62.01
CCL18109 (BN171_210045)
 0.07 0.03 1.35 0.99 1.45 11.22 24.15 0.05 5.62 89.37 65.46 24.98 27.84 1.04 0.26 34.6 17.22 0.91 3.91 0.26 0.49 0.0 0.88 3.25 10.15 0.45 0.29 1.94 49.74
CCL18110 (BN171_210046)
 3.26 1.07 17.89 12.94 24.59 0.0 23.69 1.24 9.75 80.99 60.02 29.14 38.93 11.61 5.83 47.66 28.47 13.44 1.42 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.0 3.25 49.74
CCL18111 (BN171_210047)
 4.73 3.24 17.45 15.97 31.26 0.0 32.3 3.15 6.07 114.45 92.54 47.93 48.07 9.01 7.73 61.72 26.86 18.59 1.89 0.0 0.16 0.0 0.0 0.0 0.0 0.0 0.0 7.05 67.71
CCL18112 (BN171_210048)
 3.53 2.45 5.98 7.52 8.84 0.0 34.5 1.62 3.66 105.54 87.42 50.48 35.88 4.25 3.69 44.78 17.63 6.47 1.38 0.0 0.11 0.0 0.0 0.0 0.0 0.0 0.0 13.78 81.9
CCL18113 (BN171_210049)
 10.09 12.83 19.87 23.36 32.6 0.0 43.56 11.87 4.67 135.03 114.24 126.38 55.02 10.88 16.66 68.54 30.67 22.35 2.18 0.0 0.63 0.0 0.0 0.0 0.0 0.0 0.0 14.14 95.44
CCL18114 (BN171_210050)
 14.66 7.13 12.07 12.23 16.67 0.0 40.13 9.08 24.09 112.48 98.16 90.1 77.01 10.57 9.71 75.53 31.87 19.77 1.93 0.0 0.43 0.0 0.0 0.0 0.0 0.0 0.0 29.27 89.84
CCL18115 (BN171_210051)
 13.97 15.46 21.31 26.74 32.01 0.0 52.96 14.51 71.59 111.82 126.93 112.05 56.47 16.07 20.48 68.13 48.71 27.61 2.26 0.0 0.53 0.0 0.0 0.0 0.0 0.0 0.0 0.15 85.81
CCL18116 (eryC)
 15.62 12.1 32.71 38.63 58.97 0.0 59.95 11.57 59.49 136.06 116.35 102.45 72.79 17.27 26.77 84.91 37.34 32.07 2.5 0.0 1.1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 115.56
CCL18572 (csdA)
 14.61 4.75 17.44 12.92 15.23 11.02 29.32 9.43 7.53 13.1 15.13 16.72 18.41 20.36 5.7 19.19 8.52 11.46 6.06 10.57 2.8 5.31 8.52 3.52 6.4 6.11 1.55 6.98 12.19
CCL19430 (BN171_3140002)
 25.55 22.76 47.55 43.76 94.31 100.1 205.93 54.41 42.81 244.34 212.77 196.8 194.27 27.43 28.32 368.59 96.47 62.15 76.96 22.83 13.36 33.58 75.43 87.52 129.69 31.78 20.25 57.1 157.82
CCL19431 (BN171_3140003)
 15.34 10.16 29.14 23.25 49.4 73.76 139.93 25.58 30.42 185.69 150.34 113.7 136.34 14.32 11.81 281.78 59.18 36.16 59.08 18.32 8.84 27.36 63.05 76.3 113.95 17.19 24.21 31.99 99.26
CCL19432 (BN171_3140004)
 21.1 12.17 53.43 34.45 105.88 122.91 168.14 51.37 40.06 241.96 175.38 165.97 127.58 21.51 12.68 286.04 60.08 55.6 73.49 43.98 14.43 70.59 53.12 67.67 96.53 56.12 31.55 44.85 116.99
CCL19509 (BN171_3180033)
 5.06 4.03 6.5 5.87 5.72 0.0 31.76 3.36 7.78 34.7 27.42 26.51 17.75 5.91 4.85 24.32 8.33 4.5 0.52 0.0 0.21 0.0 0.0 0.0 0.0 0.0 0.0 0.0 22.24
CCL19510 (BN171_3180034)
 10.39 23.12 11.27 18.31 18.54 0.0 49.17 13.44 4.7 63.5 49.36 57.46 27.09 6.32 17.54 32.41 16.55 10.7 1.06 0.0 0.35 0.0 0.0 0.0 0.0 0.0 0.0 0.0 43.71
CCL19511 (BN171_3180035)
 3.13 4.22 5.12 4.8 9.54 0.0 21.8 3.29 2.68 27.93 28.98 33.27 19.08 4.92 3.51 17.59 14.5 4.46 0.58 0.0 0.28 0.0 0.0 0.0 0.0 0.0 0.0 0.0 21.39
CCL19512 (BN171_3180036)
 8.71 9.55 9.4 8.76 9.01 0.0 64.94 5.5 4.9 58.16 56.31 64.97 36.53 7.21 9.11 35.78 16.64 8.85 1.13 0.0 0.26 0.0 0.0 0.0 0.0 0.0 0.0 0.0 45.05
CCL19513 (BN171_3180037)
 15.48 11.71 14.87 11.25 18.24 0.0 63.41 16.17 3.91 80.97 76.34 74.27 45.29 8.51 11.26 36.11 13.34 11.22 1.01 0.0 0.43 0.0 0.0 0.0 0.0 0.0 0.0 0.0 68.94
CCL19514 (BN171_3180038)
 0.89 0.96 1.38 1.22 2.0 0.0 1.35 0.73 1.43 2.02 2.84 2.28 3.07 1.15 0.82 2.22 2.95 0.82 0.05 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.61
CCL19515 (BN171_3180039)
 14.5 11.47 14.59 10.48 20.55 0.0 24.62 12.99 10.97 36.02 30.56 27.11 22.83 12.97 13.48 25.39 13.74 13.54 0.7 0.0 0.14 0.0 0.0 0.0 0.0 0.0 0.0 0.0 29.89
CCL19556 (BN171_3260007)
 23.55 13.35 21.51 16.56 24.19 12.09 46.22 21.59 22.77 77.98 74.63 74.79 93.9 23.96 18.05 107.7 47.04 29.22 24.48 10.46 10.08 2.7 37.04 19.7 24.04 6.78 3.86 38.81 60.04
CCL19604 (BN171_3290017)
 0.85 0.8 0.78 0.71 0.5 0.0 1.85 0.66 0.96 1.5 1.75 2.29 1.45 0.48 0.31 2.97 1.03 0.44 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.32
CCL19677 (dapA)
 105.74 138.36 105.55 118.13 94.69 84.18 321.61 76.16 46.79 228.01 208.53 258.15 199.91 91.28 252.16 225.53 77.94 141.0 77.1 102.83 179.32 119.52 51.84 139.11 120.09 72.45 79.29 103.05 184.55
CCL20129 (BN171_370003)
 5.74 2.97 4.76 4.22 5.01 7.5 21.73 3.28 5.54 20.31 14.24 13.9 15.13 5.2 3.98 19.65 5.02 8.28 7.4 5.99 4.42 6.3 7.06 8.76 13.46 4.93 5.47 5.19 11.83
CCL20130 (BN171_370004)
 4.54 2.66 4.15 4.8 5.86 4.52 13.15 4.17 3.88 14.2 9.47 9.51 13.22 4.89 3.28 14.7 4.94 7.63 6.55 3.92 2.97 5.55 6.07 7.87 9.84 3.84 6.8 5.39 7.99
CCL20131 (BN171_370005)
 18.96 4.77 17.46 13.14 18.84 8.44 80.78 5.8 23.6 89.17 77.13 85.21 79.58 17.15 9.68 100.27 43.05 23.78 39.3 8.86 5.2 10.2 42.05 26.11 27.9 4.99 7.22 27.64 73.7
CCL20132 (BN171_370006)
 35.39 16.14 33.57 27.43 34.69 11.43 55.07 21.95 39.55 100.37 73.75 74.66 72.88 28.23 21.4 73.26 52.77 46.77 41.35 12.86 8.32 15.02 39.75 22.38 24.85 9.31 9.3 15.71 48.81
CCL20133 (BN171_370007)
 10.06 6.69 11.38 7.19 6.98 9.48 59.63 6.36 26.95 91.21 63.07 63.84 68.45 7.75 7.74 72.4 31.64 10.46 25.63 4.02 2.89 0.87 26.54 6.1 9.66 1.46 2.99 14.16 56.6
CCL20174 (BN171_3740003)
 0.22 0.4 0.73 0.61 1.53 0.0 3.32 0.73 0.41 3.44 3.38 3.45 2.79 0.67 0.21 5.16 0.78 0.58 0.04 0.0 0.09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.37
CCL20175 (BN171_3740004)
 0.0 0.04 0.04 0.0 0.0 0.0 3.25 0.08 0.0 1.67 1.14 0.84 2.28 0.09 0.11 5.9 0.57 0.1 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.54
CCL20178 (BN171_3740007)
 0.32 0.92 1.0 0.49 0.88 0.0 5.92 1.08 1.11 10.68 10.6 7.78 7.71 0.94 0.31 16.71 1.93 0.45 0.11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 7.88
CCL20249 (BN171_390003)
 1.41 0.85 1.71 1.86 1.3 0.0 14.6 0.86 2.56 13.58 6.87 6.99 11.26 1.17 1.1 13.95 6.32 2.92 0.11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 4.95
CCL20541 (BN171_620002)
 1.16 0.71 0.89 0.5 1.73 0.0 18.26 1.22 3.42 35.93 31.39 33.51 22.67 1.31 0.69 25.49 8.48 1.98 0.48 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 26.28
CCL20542 (BN171_620003)
 67.14 31.26 62.17 41.82 46.9 6.33 66.86 48.94 35.87 70.97 76.52 75.56 80.85 52.49 30.65 120.29 35.46 58.99 38.4 16.39 11.3 3.35 36.13 26.94 24.83 9.16 14.51 46.07 81.48

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)