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(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | BHI | Basal Medium | CD196,BHI | CD196,Basal Medium | CD196,Log,BHI | ClnR mutant | LB-CD16 | Log,BHI | LuxS KO | ND-CD12 | ND-CD13 | ND-CD17 | R20291 | R20291,BHI | R20291,Basal Medium | R20291,Heme+ | R20291,Log | R20291,Log,BHI | Strain 630 | Strain 630,BHI | Strain 630,Basal Medium | Strain 630,Faecal water+ | Strain 630,HPUra+ | Strain 630,Lag | Strain 630,Log | Strain 630,Log,BHI | Strain 630,Sporulating | TW11 | UK1 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CCL16919 (BN171_10007) | 0.43 | -0.25 | 0.59 | 0.09 | 1.17 | -1.07 | 0.27 | -0.47 | -1.04 | 0.61 | 0.42 | 0.54 | 0.04 | 0.87 | 0.2 | 0.02 | -0.43 | 0.13 | 0.17 | 0.28 | -0.77 | -0.31 | -0.31 | -1.04 | -1.2 | -0.5 | -1.92 | -1.26 | 0.1 |
CCL16922 (rsbW) | 0.48 | 0.09 | 0.49 | 0.24 | 0.39 | -1.09 | 0.45 | 0.12 | -1.11 | 0.31 | -0.03 | 0.24 | 0.24 | 1.24 | 0.3 | 0.51 | -1.46 | 0.16 | -0.28 | 0.15 | -0.12 | -0.8 | -0.84 | -0.5 | -0.69 | -0.48 | -1.47 | -0.48 | 0.14 |
CCL16923 (sigB) | 0.08 | -0.25 | -0.22 | -0.44 | -0.22 | -0.82 | 0.8 | -0.05 | -0.85 | 0.96 | 0.56 | 0.78 | 0.62 | 0.1 | -0.24 | 0.93 | -0.76 | -0.17 | -0.33 | -0.63 | -1.01 | 0.24 | -0.83 | 0.01 | -0.3 | -1.02 | -1.04 | -0.12 | 0.54 |
CCL17000 (BN171_1070002) | 0.11 | 1.04 | -0.54 | -0.68 | 0.36 | -1.47 | 1.09 | -0.08 | -1.89 | 0.72 | 0.52 | 0.2 | 0.4 | 0.13 | 0.46 | 1.0 | -0.62 | 0.04 | -2.18 | 0.41 | -1.23 | -1.48 | -1.98 | -1.86 | -0.5 | 0.6 | -1.32 | 0.0 | 0.46 |
CCL17031 (BN171_1090012) | 0.88 | -1.33 | 0.61 | -0.1 | -0.19 | -1.15 | 0.2 | -0.64 | 0.28 | 0.33 | -0.46 | -0.05 | 0.43 | 0.68 | -0.58 | 0.55 | -0.48 | 0.69 | -0.38 | 0.65 | -0.62 | -0.48 | -0.11 | -0.18 | -0.35 | -0.6 | -1.71 | 0.59 | -0.25 |
CCL17032 (BN171_1090013) | 0.07 | -1.34 | 0.13 | -0.61 | -0.51 | -1.05 | 1.07 | -0.68 | -0.25 | 0.89 | 0.53 | 0.58 | 0.56 | 0.27 | -0.5 | 0.54 | -0.57 | -0.05 | -0.48 | 0.24 | -1.04 | 0.66 | -0.25 | -0.39 | -0.54 | -0.99 | -0.79 | 0.28 | 0.3 |
CCL17174 (BN171_1330035) | 0.49 | -0.89 | 0.49 | 0.45 | 1.07 | -2.2 | 0.91 | 0.6 | -1.95 | 0.32 | 0.31 | 0.54 | 0.93 | 0.37 | -0.98 | 1.26 | -0.44 | 0.3 | -1.13 | -2.19 | -2.44 | -0.7 | 0.76 | -1.08 | -2.16 | -2.45 | -1.38 | -0.92 | 0.42 |
CCL17175 (BN171_1330036) | -0.23 | -2.44 | 0.1 | -0.04 | -0.01 | -1.73 | 1.33 | -1.58 | -1.26 | 1.12 | 0.92 | 0.96 | 1.61 | -0.28 | -2.05 | 1.33 | -0.32 | -0.58 | -1.02 | -2.36 | -2.44 | -1.56 | 0.95 | -1.24 | -1.6 | -3.01 | -0.5 | -0.9 | 1.0 |
CCL17176 (BN171_1330037) | -1.65 | -2.44 | -0.55 | -0.61 | -0.51 | -2.9 | 1.74 | -1.94 | -1.0 | 1.05 | 0.81 | 0.79 | 1.64 | -0.49 | -2.56 | 1.03 | -0.23 | -1.39 | -0.8 | -1.56 | -1.11 | 0.68 | 0.93 | -0.86 | -0.88 | -3.52 | -0.01 | -0.37 | 0.63 |
CCL17177 (mnaA) | 0.07 | -0.84 | 0.08 | 0.68 | 0.25 | -1.56 | 1.7 | -0.71 | -0.61 | 0.16 | 0.12 | 0.73 | 1.07 | -0.17 | -0.82 | 0.52 | -0.67 | -0.13 | -0.94 | -1.19 | -0.31 | 0.72 | 0.29 | -0.95 | -1.01 | -1.78 | -0.42 | -1.21 | 0.23 |
CCL17278 (polA) | 0.72 | -0.76 | 0.31 | -0.53 | 0.03 | -0.28 | 1.09 | -0.31 | -1.24 | 0.68 | 0.35 | 0.43 | 0.8 | 0.77 | -0.79 | 0.92 | -0.59 | -0.0 | -0.84 | -0.28 | -1.38 | -0.27 | -0.4 | -0.47 | -0.26 | -0.93 | -0.26 | -1.16 | 0.15 |
CCL17280 (BN171_1430007) | 0.59 | -0.88 | 0.22 | -0.66 | -0.07 | 0.29 | 1.11 | -0.54 | -1.71 | 0.61 | 0.5 | 0.42 | 0.95 | 0.58 | -0.66 | 1.02 | -0.55 | -0.25 | -0.6 | -0.53 | -1.41 | 0.06 | -0.11 | -0.45 | -0.32 | -0.98 | -0.1 | -1.15 | -0.28 |
CCL17281 (BN171_1430008) | 0.45 | -0.68 | 0.01 | -0.78 | -0.25 | -0.25 | 1.25 | -0.4 | -1.98 | 0.96 | 0.55 | 0.72 | 0.86 | 0.28 | -0.79 | 0.95 | -0.58 | -0.37 | -0.86 | -0.62 | -1.9 | -0.3 | -0.24 | -0.31 | -0.21 | -1.17 | 0.2 | -0.7 | 0.38 |
CCL17490 (BN171_1520008) | 0.17 | -1.37 | 0.34 | -0.7 | -0.57 | 0.46 | 1.42 | -1.27 | -0.8 | 0.66 | 0.11 | 0.32 | 1.06 | 0.11 | -1.61 | 1.05 | -0.87 | -0.6 | -0.35 | 0.06 | -1.64 | -0.47 | 0.68 | -0.7 | 0.08 | -1.45 | -0.07 | -0.26 | -0.08 |
CCL17492 (dapG) | 0.91 | -0.68 | 0.47 | -0.17 | -0.06 | 0.2 | 1.09 | -0.37 | -3.19 | 0.36 | -0.04 | 0.15 | 0.43 | 0.17 | -0.92 | 0.68 | -1.09 | 0.14 | -0.64 | 0.33 | -1.52 | 0.8 | 0.01 | -0.82 | 0.01 | -0.32 | -0.52 | -0.69 | -0.21 |
CCL17493 (tepA) | 0.82 | -0.62 | 0.47 | -0.06 | 0.11 | 0.22 | 1.04 | -0.42 | -3.58 | 0.27 | -0.03 | 0.19 | 0.37 | 0.36 | -0.88 | 0.71 | -0.89 | 0.17 | -0.61 | 0.03 | -1.64 | 0.4 | -0.06 | -0.67 | 0.26 | -0.71 | 0.17 | -0.39 | -0.4 |
CCL17695 (BN171_1680010) | -2.63 | -3.71 | -1.09 | -1.6 | -1.35 | -1.77 | 2.0 | -4.08 | -0.75 | 1.91 | 1.67 | 1.59 | 1.14 | -0.21 | -1.63 | 1.31 | 0.56 | -1.83 | -1.24 | -2.27 | -2.65 | -6.36 | -1.62 | -2.5 | -2.1 | -5.18 | -1.56 | -1.91 | 1.53 |
CCL17998 (BN171_2000001) | -1.62 | -2.84 | -1.12 | -0.91 | -1.5 | -1.2 | 1.64 | -2.74 | -0.23 | 1.44 | 1.09 | 1.23 | 1.27 | -1.3 | -2.2 | 1.85 | 0.04 | -1.48 | -1.23 | -0.85 | 0.03 | -1.58 | -3.45 | -0.9 | 0.45 | -1.43 | -1.28 | -2.14 | 1.06 |
CCL18092 (spsI) | -0.16 | -0.88 | 0.77 | 0.99 | 0.91 | - | 0.47 | -0.71 | -0.7 | 1.94 | 1.42 | 0.67 | 0.69 | 0.1 | 0.22 | 0.61 | 0.44 | 0.7 | -3.69 | - | -6.13 | - | - | - | - | - | - | -0.48 | 1.07 |
CCL18093 (rmlC) | -0.5 | -1.45 | 0.72 | 0.71 | 0.57 | - | 0.58 | -1.31 | -1.15 | 2.07 | 1.49 | 1.14 | 0.86 | -0.1 | -0.1 | 0.53 | 1.14 | 0.32 | -3.8 | - | -6.58 | - | - | - | - | - | - | -0.65 | 1.21 |
CCL18094 (spsJ) | -0.21 | -1.18 | 0.91 | 1.38 | 1.18 | - | 0.29 | -1.41 | -1.04 | 1.57 | 1.12 | 0.58 | 0.86 | 0.27 | 0.54 | 1.0 | 0.28 | 0.76 | -4.03 | - | -5.69 | - | - | - | - | - | - | -0.54 | 1.04 |
CCL18109 (BN171_210045) | -7.53 | -8.88 | -3.27 | -3.72 | -3.17 | -0.22 | 0.89 | -8.15 | -1.21 | 2.78 | 2.33 | 0.94 | 1.1 | -3.65 | -5.67 | 1.41 | 0.4 | -3.83 | -1.74 | -5.67 | -4.74 | - | -3.88 | -2.0 | -0.36 | -4.85 | -5.5 | -2.74 | 1.93 |
CCL18110 (BN171_210046) | -2.3 | -3.91 | 0.16 | -0.31 | 0.62 | - | 0.56 | -3.69 | -0.72 | 2.34 | 1.9 | 0.86 | 1.28 | -0.47 | -1.46 | 1.57 | 0.83 | -0.25 | -3.5 | - | -7.61 | - | - | - | - | - | - | -2.3 | 1.63 |
CCL18111 (BN171_210047) | -2.17 | -2.72 | -0.29 | -0.42 | 0.55 | - | 0.6 | -2.76 | -1.81 | 2.43 | 2.12 | 1.17 | 1.17 | -1.24 | -1.46 | 1.53 | 0.33 | -0.2 | -3.49 | - | -7.03 | - | - | - | - | - | - | -1.6 | 1.67 |
CCL18112 (BN171_210048) | -2.35 | -2.87 | -1.59 | -1.26 | -1.02 | - | 0.94 | -3.47 | -2.29 | 2.55 | 2.28 | 1.49 | 1.0 | -2.08 | -2.28 | 1.32 | -0.03 | -1.47 | -3.7 | - | -7.35 | - | - | - | - | - | - | -0.38 | 2.19 |
CCL18113 (BN171_210049) | -1.54 | -1.19 | -0.56 | -0.33 | 0.15 | - | 0.57 | -1.31 | -2.65 | 2.2 | 1.96 | 2.11 | 0.91 | -1.43 | -0.82 | 1.22 | 0.06 | -0.39 | -3.75 | - | -5.53 | - | - | - | - | - | - | -1.05 | 1.7 |
CCL18114 (BN171_210050) | -0.88 | -1.92 | -1.16 | -1.14 | -0.7 | - | 0.57 | -1.57 | -0.16 | 2.06 | 1.86 | 1.74 | 1.51 | -1.35 | -1.47 | 1.48 | 0.24 | -0.45 | -3.81 | - | -5.98 | - | - | - | - | - | - | 0.12 | 1.73 |
CCL18115 (BN171_210051) | -1.19 | -1.05 | -0.58 | -0.26 | 0.0 | - | 0.73 | -1.14 | 1.17 | 1.81 | 1.99 | 1.81 | 0.82 | -0.99 | -0.64 | 1.09 | 0.61 | -0.21 | -3.82 | - | -5.91 | - | - | - | - | - | - | -7.69 | 1.43 |
CCL18116 (eryC) | -1.19 | -1.56 | -0.12 | 0.12 | 0.73 | - | 0.75 | -1.62 | 0.74 | 1.93 | 1.71 | 1.52 | 1.03 | -1.05 | -0.41 | 1.25 | 0.07 | -0.15 | -3.84 | - | -5.01 | - | - | - | - | - | - | - | 1.7 |
CCL18572 (csdA) | 0.4 | -1.22 | 0.66 | 0.22 | 0.46 | -0.01 | 1.41 | -0.23 | -0.56 | 0.24 | 0.45 | 0.6 | 0.73 | 0.88 | -0.96 | 0.79 | -0.38 | 0.05 | -0.87 | -0.07 | -1.98 | -1.06 | -0.38 | -1.65 | -0.79 | -0.86 | -2.84 | -0.66 | 0.14 |
CCL19430 (BN171_3140002) | -1.9 | -2.07 | -1.01 | -1.13 | -0.02 | 0.07 | 1.11 | -0.81 | -1.16 | 1.35 | 1.15 | 1.04 | 1.02 | -1.8 | -1.76 | 1.95 | 0.01 | -0.62 | -0.31 | -2.07 | -2.84 | -1.51 | -0.34 | -0.13 | 0.44 | -1.59 | -2.24 | -0.74 | 0.72 |
CCL19431 (BN171_3140003) | -2.11 | -2.71 | -1.19 | -1.51 | -0.43 | 0.15 | 1.08 | -1.38 | -1.13 | 1.48 | 1.18 | 0.78 | 1.04 | -2.21 | -2.49 | 2.09 | -0.17 | -0.88 | -0.17 | -1.86 | -2.91 | -1.28 | -0.07 | 0.2 | 0.78 | -1.95 | -1.46 | -1.05 | 0.58 |
CCL19432 (BN171_3140004) | -1.99 | -2.78 | -0.65 | -1.28 | 0.34 | 0.56 | 1.01 | -0.7 | -1.06 | 1.53 | 1.07 | 0.99 | 0.61 | -1.96 | -2.72 | 1.77 | -0.48 | -0.59 | -0.19 | -0.93 | -2.53 | -0.24 | -0.65 | -0.31 | 0.21 | -0.58 | -1.41 | -0.9 | 0.48 |
CCL19509 (BN171_3180033) | -0.75 | -1.08 | -0.39 | -0.54 | -0.58 | - | 1.9 | -1.34 | -0.13 | 2.02 | 1.68 | 1.64 | 1.06 | -0.53 | -0.81 | 1.51 | -0.03 | -0.92 | -4.03 | - | -5.37 | - | - | - | - | - | - | - | 1.38 |
CCL19510 (BN171_3180034) | -0.66 | 0.5 | -0.54 | 0.16 | 0.18 | - | 1.59 | -0.28 | -1.8 | 1.95 | 1.59 | 1.81 | 0.73 | -1.37 | 0.1 | 0.98 | 0.01 | -0.61 | -3.95 | - | -5.55 | - | - | - | - | - | - | - | 1.42 |
CCL19511 (BN171_3180035) | -1.35 | -0.92 | -0.64 | -0.73 | 0.26 | - | 1.45 | -1.28 | -1.57 | 1.81 | 1.86 | 2.06 | 1.26 | -0.7 | -1.18 | 1.14 | 0.86 | -0.84 | -3.77 | - | -4.83 | - | - | - | - | - | - | - | 1.42 |
CCL19512 (BN171_3180036) | -0.87 | -0.74 | -0.76 | -0.86 | -0.82 | - | 2.03 | -1.53 | -1.7 | 1.87 | 1.83 | 2.03 | 1.2 | -1.14 | -0.8 | 1.17 | 0.07 | -0.84 | -3.82 | - | -5.95 | - | - | - | - | - | - | - | 1.5 |
CCL19513 (BN171_3180037) | -0.38 | -0.78 | -0.43 | -0.84 | -0.14 | - | 1.66 | -0.31 | -2.36 | 2.01 | 1.93 | 1.89 | 1.17 | -1.24 | -0.84 | 0.85 | -0.59 | -0.84 | -4.32 | - | -5.56 | - | - | - | - | - | - | - | 1.78 |
CCL19514 (BN171_3180038) | -0.25 | -0.15 | 0.37 | 0.19 | 0.91 | - | 0.34 | -0.53 | 0.43 | 0.93 | 1.41 | 1.1 | 1.53 | 0.11 | -0.37 | 1.06 | 1.47 | -0.38 | -4.29 | - | -4.54 | - | - | - | - | - | - | - | 1.3 |
CCL19515 (BN171_3180039) | 0.28 | -0.06 | 0.29 | -0.19 | 0.78 | - | 1.04 | 0.12 | -0.12 | 1.59 | 1.35 | 1.18 | 0.93 | 0.12 | 0.17 | 1.09 | 0.2 | 0.18 | -4.09 | - | -6.43 | - | - | - | - | - | - | - | 1.32 |
CCL19556 (BN171_3260007) | -0.53 | -1.35 | -0.66 | -1.04 | -0.49 | -1.49 | 0.44 | -0.66 | -0.58 | 1.2 | 1.13 | 1.14 | 1.46 | -0.51 | -0.92 | 1.66 | 0.47 | -0.22 | -0.48 | -1.7 | -1.76 | -3.65 | 0.12 | -0.79 | -0.5 | -2.33 | -3.14 | 0.19 | 0.82 |
CCL19604 (BN171_3290017) | 0.25 | 0.17 | 0.13 | -0.01 | -0.5 | - | 1.38 | -0.1 | 0.43 | 1.07 | 1.3 | 1.68 | 1.02 | -0.58 | -1.2 | 2.06 | 0.53 | -0.69 | -4.82 | - | - | - | - | - | - | - | - | - | 0.89 |
CCL19677 (dapA) | -0.38 | 0.0 | -0.39 | -0.22 | -0.54 | -0.71 | 1.22 | -0.86 | -1.56 | 0.72 | 0.6 | 0.9 | 0.53 | -0.6 | 0.87 | 0.71 | -0.82 | 0.03 | -0.84 | -0.42 | 0.38 | -0.21 | -1.41 | 0.01 | -0.2 | -0.93 | -0.8 | -0.42 | 0.42 |
CCL20129 (BN171_370003) | -0.57 | -1.52 | -0.84 | -1.02 | -0.77 | -0.18 | 1.35 | -1.38 | -0.62 | 1.25 | 0.74 | 0.7 | 0.83 | -0.71 | -1.1 | 1.2 | -0.77 | -0.04 | -0.2 | -0.51 | -0.95 | -0.44 | -0.27 | 0.04 | 0.66 | -0.79 | -0.64 | -0.72 | 0.47 |
CCL20130 (BN171_370004) | -0.58 | -1.35 | -0.71 | -0.5 | -0.21 | -0.58 | 0.96 | -0.7 | -0.8 | 1.07 | 0.48 | 0.49 | 0.96 | -0.47 | -1.05 | 1.12 | -0.45 | 0.17 | -0.05 | -0.79 | -1.19 | -0.29 | -0.16 | 0.22 | 0.54 | -0.82 | 0.01 | -0.33 | 0.24 |
CCL20131 (BN171_370005) | -0.85 | -2.84 | -0.97 | -1.38 | -0.86 | -2.02 | 1.24 | -2.56 | -0.53 | 1.39 | 1.18 | 1.32 | 1.22 | -0.99 | -1.82 | 1.55 | 0.33 | -0.52 | 0.2 | -1.95 | -2.71 | -1.74 | 0.3 | -0.39 | -0.29 | -2.78 | -2.24 | -0.3 | 1.11 |
CCL20132 (BN171_370006) | -0.06 | -1.19 | -0.13 | -0.42 | -0.08 | -1.69 | 0.58 | -0.74 | 0.1 | 1.45 | 1.0 | 1.02 | 0.99 | -0.38 | -0.78 | 0.99 | 0.52 | 0.35 | 0.17 | -1.52 | -2.15 | -1.29 | 0.11 | -0.72 | -0.57 | -1.98 | -1.98 | -1.23 | 0.41 |
CCL20133 (BN171_370007) | -1.29 | -1.88 | -1.11 | -1.77 | -1.81 | -1.37 | 1.28 | -1.95 | 0.13 | 1.89 | 1.36 | 1.38 | 1.48 | -1.66 | -1.67 | 1.56 | 0.37 | -1.23 | 0.06 | -2.61 | -3.09 | -4.82 | 0.11 | -2.01 | -1.35 | -4.07 | -3.04 | -0.79 | 1.2 |
CCL20174 (BN171_3740003) | -2.25 | -1.42 | -0.56 | -0.8 | 0.52 | - | 1.64 | -0.54 | -1.37 | 1.69 | 1.67 | 1.69 | 1.39 | -0.68 | -2.33 | 2.27 | -0.44 | -0.89 | -4.8 | - | -3.55 | - | - | - | - | - | - | - | 1.16 |
CCL20175 (BN171_3740004) | - | -3.68 | -3.75 | - | - | - | 2.5 | -2.94 | - | 1.54 | 0.98 | 0.54 | 1.99 | -2.63 | -2.42 | 3.36 | -0.01 | -2.49 | -5.1 | - | - | - | - | - | - | - | - | - | -0.1 |
CCL20178 (BN171_3740007) | -3.06 | -1.53 | -1.4 | -2.44 | -1.58 | - | 1.16 | -1.3 | -1.26 | 2.01 | 2.0 | 1.55 | 1.54 | -1.5 | -3.1 | 2.66 | -0.45 | -2.56 | -4.58 | - | - | - | - | - | - | - | - | - | 1.57 |
CCL20249 (BN171_390003) | -1.2 | -1.94 | -0.93 | -0.81 | -1.32 | - | 2.17 | -1.92 | -0.35 | 2.06 | 1.08 | 1.1 | 1.79 | -1.47 | -1.57 | 2.1 | 0.96 | -0.16 | -4.88 | - | - | - | - | - | - | - | - | - | 0.6 |
CCL20541 (BN171_620002) | -2.69 | -3.39 | -3.07 | -3.91 | -2.1 | - | 1.29 | -2.62 | -1.13 | 2.27 | 2.07 | 2.17 | 1.6 | -2.51 | -3.42 | 1.77 | 0.19 | -1.91 | -3.95 | - | -8.02 | - | - | - | - | - | - | - | 1.82 |
CCL20542 (BN171_620003) | 0.56 | -0.54 | 0.45 | -0.12 | 0.05 | -2.84 | 0.56 | 0.11 | -0.34 | 0.64 | 0.75 | 0.73 | 0.83 | 0.21 | -0.57 | 1.4 | -0.36 | 0.38 | -0.24 | -1.47 | -2.01 | -3.76 | -0.33 | -0.75 | -0.87 | -2.31 | -1.65 | 0.02 | 0.84 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.