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(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | BHI | Basal Medium | CD196,BHI | CD196,Basal Medium | CD196,Log,BHI | ClnR mutant | LB-CD16 | Log,BHI | LuxS KO | ND-CD12 | ND-CD13 | ND-CD17 | R20291 | R20291,BHI | R20291,Basal Medium | R20291,Heme+ | R20291,Log | R20291,Log,BHI | Strain 630 | Strain 630,BHI | Strain 630,Basal Medium | Strain 630,Faecal water+ | Strain 630,HPUra+ | Strain 630,Lag | Strain 630,Log | Strain 630,Log,BHI | Strain 630,Sporulating | TW11 | UK1 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CCL17052 (BN171_1130006) | -0.37 | 0.08 | -0.23 | 0.62 | -0.63 | -0.9 | -0.61 | -0.68 | 0.37 | -0.17 | -0.05 | -0.41 | 0.04 | 0.01 | 0.62 | 0.45 | -0.24 | -0.12 | -0.53 | 0.62 | 0.83 | -0.67 | -0.22 | 0.68 | -0.01 | -0.28 | -2.07 | 0.63 | 0.02 |
CCL17053 (speA) | -2.69 | 1.54 | -2.68 | -0.79 | -3.5 | -1.77 | -1.68 | -3.59 | 2.85 | -2.6 | -2.34 | -2.84 | 0.71 | -2.39 | 1.63 | 3.26 | -2.01 | -2.31 | -3.28 | -1.4 | -2.51 | -4.7 | -3.56 | -1.86 | -1.63 | -3.36 | -3.23 | -3.19 | -3.04 |
CCL17188 (pepT) | -0.66 | -0.03 | 0.58 | 0.7 | 0.26 | 0.02 | 0.74 | -0.59 | 0.89 | 0.12 | -0.29 | 0.18 | 0.86 | -0.6 | 0.47 | 0.62 | -0.31 | -0.12 | -0.74 | -0.37 | -0.65 | -0.22 | -0.79 | -0.11 | -0.29 | -1.04 | -1.34 | -0.12 | -0.48 |
CCL17234 (BN171_1400006) | 0.53 | -0.1 | 0.21 | -0.75 | 0.07 | -0.47 | -0.19 | 0.24 | 1.29 | 0.25 | 0.11 | 0.61 | 0.48 | 0.18 | -0.93 | 0.44 | -0.27 | 0.27 | -0.81 | 0.57 | -0.92 | -0.58 | -0.5 | -0.97 | -0.24 | 0.04 | -1.92 | -0.74 | 0.18 |
CCL17378 (BN171_1450039) | -0.75 | -1.91 | -0.35 | -0.69 | -0.27 | -1.19 | 0.42 | -1.85 | 1.48 | 0.68 | 0.52 | 0.59 | 0.55 | -0.32 | -1.08 | 0.81 | -0.33 | -0.92 | -0.83 | 0.39 | -0.66 | -1.81 | -0.08 | 0.79 | 0.0 | -0.52 | -0.11 | 0.28 | 0.49 |
CCL17523 (BN171_1540002) | 0.14 | 0.28 | 0.13 | 0.73 | -0.81 | -0.92 | 0.09 | -0.72 | 0.9 | -0.53 | -0.64 | -0.46 | 0.3 | -0.01 | 0.13 | -0.1 | -0.65 | -0.38 | -0.59 | 0.04 | 0.54 | -2.48 | -1.33 | 1.37 | 0.87 | -1.16 | -0.46 | 0.8 | -0.95 |
CCL17527 (BN171_1540006) | 1.05 | 0.11 | 0.56 | 0.06 | 0.24 | -0.42 | 0.18 | 0.84 | 1.01 | -0.33 | 0.36 | -0.15 | -0.7 | 0.71 | -0.34 | -0.8 | -0.38 | 0.25 | -0.92 | 0.57 | -0.89 | -2.53 | 0.2 | -1.63 | -1.12 | -0.37 | -3.21 | 0.48 | -0.01 |
CCL17598 (BN171_1600002) | -1.34 | -0.23 | -0.6 | 1.14 | -0.12 | -1.1 | -0.73 | -1.22 | -0.52 | 0.37 | -0.54 | -0.91 | -0.03 | -0.98 | 0.59 | -0.41 | -1.07 | -1.03 | -0.32 | -0.32 | 2.09 | -0.34 | 0.57 | 1.23 | -0.0 | -0.84 | -3.03 | 0.94 | -1.04 |
CCL17750 (hisZ) | -2.95 | 1.61 | -2.21 | 1.1 | -2.12 | 0.36 | 0.76 | -3.97 | 2.31 | 1.18 | 0.33 | -0.29 | 0.72 | -3.41 | -1.11 | 0.71 | -1.76 | -4.06 | -0.06 | -1.48 | -1.94 | -2.03 | -0.48 | 0.19 | 0.27 | -2.09 | -1.68 | -1.27 | -0.28 |
CCL17758 (BN171_1770002) | 0.56 | 0.34 | 0.51 | -0.24 | -0.58 | -0.34 | -0.14 | -1.24 | 1.7 | 0.32 | 0.05 | 0.07 | 0.54 | 0.55 | -0.58 | 0.23 | -1.25 | -0.21 | -0.65 | 1.27 | -0.23 | -0.55 | -1.42 | -0.42 | -0.51 | -0.51 | -2.7 | -1.09 | -0.23 |
CCL17759 (BN171_1770003) | 0.24 | 0.11 | 0.33 | -0.25 | 0.21 | -0.27 | 0.48 | -0.03 | -0.09 | 0.39 | 0.46 | 0.64 | 0.32 | 0.61 | -0.62 | 0.2 | -0.65 | 0.15 | -0.59 | 0.91 | -0.69 | -0.65 | -0.42 | -0.52 | -0.45 | -0.12 | -2.87 | -1.23 | 0.4 |
CCL17848 (BN171_1840008) | 0.48 | -0.25 | 0.06 | -0.38 | 0.38 | -0.79 | 0.2 | 0.68 | 0.08 | 0.25 | -0.04 | -0.02 | 0.06 | 0.22 | -0.26 | -0.17 | -0.26 | 0.41 | -0.8 | 0.84 | -0.38 | -0.69 | -0.09 | -0.08 | -0.44 | 0.45 | -2.98 | 0.18 | 0.01 |
CCL17933 (BN171_1970002) | -0.26 | -3.2 | 0.19 | -1.49 | -0.36 | -0.79 | 0.98 | -1.3 | 1.61 | 0.85 | 0.54 | 0.72 | 0.84 | 0.24 | -2.98 | 1.45 | -0.25 | -0.28 | -0.58 | -0.38 | -2.28 | -0.78 | -0.24 | -0.29 | -0.08 | -1.79 | -3.06 | -0.57 | 0.55 |
CCL17935 (BN171_1970004) | 0.49 | -0.96 | 0.53 | -0.1 | 0.36 | -0.36 | -0.09 | -0.02 | 1.06 | 0.22 | -0.3 | -0.23 | 0.37 | 0.67 | -1.05 | 0.87 | 0.01 | 0.71 | -1.57 | 0.06 | -1.27 | 0.45 | -1.94 | -0.09 | 0.42 | -0.36 | -2.73 | -0.67 | -0.49 |
CCL17981 (pyrB) | -0.38 | -1.12 | 0.43 | 0.68 | 0.63 | -0.47 | 0.29 | -0.43 | 1.78 | 0.12 | -0.11 | -0.27 | 0.28 | -0.16 | 0.3 | 0.37 | -1.23 | 0.3 | 0.04 | 0.51 | -0.63 | -1.36 | -1.16 | 0.22 | -0.53 | -0.08 | -3.53 | -1.25 | -0.38 |
CCL17982 (pyrK) | -1.28 | -1.53 | -0.38 | 0.38 | 0.26 | -0.07 | 1.14 | -1.12 | 0.47 | 0.92 | 0.76 | 0.7 | 0.34 | -1.21 | 0.11 | 0.8 | -1.11 | -0.23 | 0.36 | -0.57 | -1.48 | -0.37 | -1.0 | 0.81 | -0.3 | -0.99 | -2.72 | -0.97 | 0.69 |
CCL17983 (pyrD) | -1.27 | -1.14 | -0.01 | 0.64 | 0.79 | 0.11 | 0.42 | -0.65 | -0.92 | 0.58 | -0.04 | 0.38 | 0.54 | -1.24 | 0.35 | 1.07 | -0.86 | -0.06 | 0.56 | -0.54 | -1.47 | 0.21 | -0.83 | 1.1 | -0.02 | -0.74 | -2.17 | -0.66 | -0.13 |
CCL17984 (pyrE) | -0.66 | -0.72 | 0.12 | 0.33 | 0.81 | 0.44 | 0.14 | 0.38 | -2.23 | 0.23 | -0.07 | 0.26 | -0.49 | -0.67 | 0.77 | 0.31 | -0.43 | 0.26 | 0.25 | 0.3 | -1.11 | 0.15 | -1.38 | 1.0 | 0.05 | 0.25 | -2.25 | -1.5 | -0.08 |
CCL18040 (BN171_2040005) | 1.45 | 0.03 | 0.94 | -0.01 | -0.15 | -0.4 | -0.34 | -0.32 | 0.9 | -0.53 | -0.93 | -1.06 | -0.24 | 0.6 | -0.41 | -0.86 | -0.99 | -0.23 | -0.27 | 1.44 | -0.31 | -1.3 | 0.2 | -0.23 | -0.34 | -0.07 | -1.45 | 0.26 | -1.15 |
CCL18138 (BN171_2100022) | - | -3.29 | -3.45 | -2.98 | - | -1.07 | 0.77 | - | 2.78 | 1.98 | 1.38 | 1.72 | 0.92 | -3.63 | -3.22 | -1.68 | 0.89 | -2.24 | -0.3 | - | -2.93 | - | 1.19 | -3.86 | -3.99 | - | -2.03 | - | 0.78 |
CCL18208 (BN171_2160004) | -0.44 | -1.01 | -0.32 | -1.19 | -0.54 | -0.18 | 0.41 | -0.84 | 1.77 | 0.22 | 0.47 | -0.06 | 0.67 | 0.0 | -1.33 | 1.2 | -0.16 | -0.79 | -0.34 | 0.46 | -0.43 | -1.27 | 0.17 | 0.12 | -0.1 | -1.48 | -1.59 | 0.17 | 0.14 |
CCL18220 (BN171_2170007) | -2.17 | -4.45 | -0.96 | -0.23 | -1.66 | -0.42 | 0.05 | -4.02 | 2.3 | 0.2 | 0.85 | 0.58 | 1.05 | -0.68 | -3.25 | 0.08 | -1.1 | -2.38 | 0.03 | -0.23 | -1.6 | -1.06 | 1.05 | 0.1 | 0.39 | -2.72 | -0.95 | 0.53 | 1.06 |
CCL18462 (BN171_2360004) | 0.45 | -2.7 | 1.6 | -0.36 | 1.59 | 0.11 | -1.84 | -0.14 | 2.78 | -2.21 | -1.63 | -2.47 | 0.64 | -0.77 | -2.62 | 1.57 | 0.56 | -1.09 | -1.71 | -0.4 | -2.33 | -4.03 | -0.71 | -1.95 | -0.78 | -1.23 | -4.05 | -2.25 | -3.19 |
CCL18468 (BN171_2370005) | -1.55 | 0.17 | -1.07 | -0.39 | -0.19 | -0.55 | -0.52 | 0.17 | 2.21 | 0.43 | 0.54 | 0.29 | 0.5 | -1.89 | -1.36 | 1.69 | -0.23 | -0.54 | -1.14 | -1.27 | -1.12 | 0.01 | -1.59 | -0.0 | 0.17 | -0.5 | -3.17 | -0.57 | 0.15 |
CCL18605 (SinR) | -1.76 | -3.13 | -2.19 | -3.07 | -3.33 | -1.71 | -1.2 | -2.83 | 3.08 | 1.45 | 2.25 | 0.16 | 0.42 | -0.71 | -3.07 | -2.96 | 2.13 | -2.06 | -2.18 | -0.26 | -1.81 | -4.27 | -1.73 | -4.44 | -3.58 | -1.82 | -5.24 | 0.18 | -2.76 |
CCL18606 (BN171_2460002) | -4.03 | -7.65 | -3.57 | -3.97 | -5.27 | -1.61 | -1.21 | -5.04 | 2.45 | 1.37 | 1.79 | 0.78 | 1.92 | -2.12 | -5.71 | -0.91 | 2.29 | -4.04 | -1.18 | -1.91 | -3.08 | -5.18 | -0.23 | -3.01 | -2.51 | -3.64 | -3.83 | 1.52 | -2.27 |
CCL18682 (BN171_2480057) | -1.07 | -1.11 | -0.8 | -0.13 | -1.21 | - | 0.85 | -0.83 | 2.41 | 1.58 | 1.7 | 1.03 | 0.8 | -1.01 | -1.16 | 0.78 | 0.88 | -0.91 | -4.22 | - | -6.39 | - | - | - | - | - | - | 0.23 | 1.12 |
CCL18683 (BN171_2490001) | 0.2 | 0.16 | 1.15 | 1.9 | 1.05 | -3.49 | -0.37 | 0.32 | 1.96 | 0.39 | -0.22 | -0.33 | 0.49 | 0.69 | 0.25 | 0.3 | 0.16 | 0.25 | -2.49 | - | -5.86 | - | -1.69 | -7.02 | -6.32 | -6.57 | -7.21 | -0.71 | -0.16 |
CCL18684 (BN171_2490002) | -0.78 | -1.56 | -0.48 | 0.32 | -0.26 | -0.12 | 0.12 | -1.21 | 1.59 | -0.39 | -0.07 | -0.02 | 0.33 | -0.72 | -0.93 | 0.73 | -0.07 | -0.41 | -0.06 | 0.17 | 0.18 | -0.16 | 0.06 | -0.01 | 0.79 | -0.34 | 0.1 | -0.26 | -0.31 |
CCL18743 (BN171_2600002) | -1.27 | -1.67 | -0.12 | -0.24 | -0.93 | -0.53 | 0.15 | -2.25 | 1.87 | 0.38 | -0.1 | 0.05 | 0.67 | -0.17 | -1.16 | 1.08 | -0.38 | -1.73 | -0.17 | 0.37 | 0.49 | -2.3 | 0.67 | 0.36 | -0.3 | -0.98 | -0.44 | 0.23 | 0.08 |
CCL19057 (pyrR) | -1.33 | -0.77 | 0.6 | 1.14 | 0.93 | -0.59 | -0.36 | 0.24 | 0.57 | 0.0 | 0.13 | 0.08 | -0.03 | -0.34 | 0.68 | 0.68 | -0.65 | 0.41 | -2.01 | -0.45 | -0.73 | -2.25 | -2.13 | 0.67 | 0.19 | 0.32 | -3.67 | 0.08 | 0.06 |
CCL19073 (BN171_2870003) | -0.26 | -0.07 | -0.21 | 0.04 | 0.57 | -0.02 | -1.62 | 0.28 | 1.57 | -0.64 | -0.28 | -0.28 | 0.65 | -1.56 | 0.49 | 1.49 | 0.08 | -0.48 | -1.19 | -0.47 | 0.01 | -2.04 | -2.74 | -1.2 | 1.53 | -0.09 | -2.98 | -0.38 | -1.23 |
CCL19075 (BN171_2870005) | 0.6 | 0.69 | 0.66 | 1.51 | 0.48 | -2.72 | -0.56 | 0.8 | 0.77 | -0.23 | -0.2 | -0.27 | 0.27 | -0.7 | -0.31 | 0.1 | -1.47 | -0.53 | -1.13 | -0.21 | 0.32 | 0.86 | -0.24 | -1.17 | -1.33 | -0.69 | -4.21 | -0.19 | -0.25 |
CCL19233 (BN171_2970012) | 0.54 | -2.09 | 0.24 | -0.97 | 0.81 | -0.57 | -0.56 | 0.8 | 1.18 | -0.57 | 0.12 | -0.48 | 0.52 | 0.94 | -2.67 | 1.31 | -0.32 | 0.48 | -0.95 | 0.55 | -2.12 | -0.91 | -0.05 | -0.62 | -0.52 | 0.34 | -3.39 | -1.04 | -0.06 |
CCL19326 (BN171_3040002) | 0.1 | -2.03 | 1.07 | 0.26 | 0.64 | -1.67 | - | -1.04 | 2.39 | - | - | -2.72 | 1.68 | 0.25 | -0.17 | 2.86 | 1.2 | 0.49 | -2.56 | - | -4.82 | - | -2.93 | -6.57 | - | - | -5.69 | - | - |
CCL19338 (BN171_3070004) | -0.21 | -2.23 | 0.12 | 0.13 | 0.21 | -1.17 | 0.7 | -2.26 | 1.36 | 0.14 | 0.02 | 0.55 | 0.83 | 0.04 | -1.3 | 0.65 | -0.61 | 0.06 | -0.35 | 0.71 | -0.56 | -2.58 | -0.42 | -0.64 | 0.38 | -0.17 | -3.67 | 0.7 | 0.18 |
CCL19469 (BN171_3170003) | -0.65 | -3.34 | 0.45 | -1.52 | -0.43 | -1.67 | -0.54 | -1.97 | 2.08 | 0.74 | 0.97 | 1.3 | 0.47 | -0.16 | -2.23 | 0.74 | 0.36 | -0.83 | 0.1 | -1.0 | -3.35 | -1.28 | -1.06 | -1.85 | -1.21 | -2.1 | -4.62 | 1.07 | 1.35 |
CCL19620 (smpB) | 0.06 | -0.32 | 0.36 | 0.02 | -0.13 | -0.37 | 0.43 | -0.67 | 1.15 | 0.69 | 0.66 | 0.72 | -0.08 | -0.08 | -0.3 | -0.22 | -0.19 | -0.18 | 0.26 | -0.14 | -0.79 | -2.05 | 0.41 | -0.32 | -0.39 | -0.68 | -2.59 | -0.9 | 0.73 |
CCL20059 (carA) | -2.16 | -0.87 | -0.62 | 0.87 | 0.27 | 0.66 | -0.53 | -1.64 | 1.02 | -0.42 | -0.56 | -0.57 | 0.81 | -1.79 | 1.91 | 0.85 | -1.52 | -0.7 | 0.04 | -1.22 | -1.14 | -0.77 | -0.29 | 1.83 | -0.64 | -1.37 | -1.93 | -0.68 | -1.04 |
CCL20060 (pyrF) | -1.89 | -0.35 | -0.32 | 1.13 | 0.6 | 0.37 | -1.09 | -0.78 | 2.04 | -1.13 | -1.35 | -1.32 | 0.18 | -1.73 | 2.09 | 0.23 | -1.39 | -0.33 | -0.36 | -0.63 | -1.02 | 0.05 | -1.1 | 1.21 | -1.31 | -0.45 | -2.92 | -1.63 | -1.45 |
CCL20296 (BN171_4060003) | 0.92 | 0.16 | 1.35 | 2.42 | 1.37 | - | -1.28 | -0.32 | 2.08 | -0.97 | -1.46 | -1.12 | 0.03 | 0.52 | 1.04 | 0.16 | 0.32 | 0.63 | -7.27 | - | -5.89 | - | - | - | - | - | - | - | -1.76 |
CCL20297 (BN171_4060004) | -0.03 | -1.45 | 0.77 | 1.16 | 0.57 | - | 0.6 | -1.27 | 2.67 | 0.01 | 0.38 | 0.54 | 0.92 | -0.21 | -0.48 | 1.39 | 0.48 | 0.09 | -4.79 | - | -5.05 | - | - | - | - | - | - | - | 0.63 |
CCL20668 (BN171_880004) | -0.39 | -0.16 | -0.02 | 0.38 | -0.11 | -7.93 | 1.63 | -0.94 | 2.09 | 1.61 | 0.87 | 0.97 | 0.87 | -1.15 | -0.73 | 1.65 | 0.19 | -1.09 | -3.36 | -6.94 | -4.32 | -3.58 | -5.17 | -7.57 | -5.1 | - | -7.36 | - | 0.57 |
CCL20669 (BN171_880005) | -0.93 | 0.01 | -0.13 | 1.08 | -0.19 | -1.38 | 0.35 | -1.13 | 2.57 | 1.05 | 0.69 | 0.09 | 0.11 | -1.24 | -0.01 | 0.6 | -0.16 | -0.58 | -0.07 | -1.88 | -0.74 | -0.68 | -1.84 | -0.97 | -0.98 | -2.42 | -1.41 | - | -0.18 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.