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AAC75643 (rluD, b2594)


Aliases : rluD, b2594

Description : 23S rRNA pseudouridine(1911,1915,1917) synthase [Ensembl]. S4 domain, RNA pseudouridylate synthase [Interproscan].


Gene families : OG_02_0000046 (OrthoFinder) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAC75643
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AAL20116 STM1187, rluC 23S rRNA pseudouridylate synthase [Ensembl]. S4 domain,... 0.06 OrthoFinder
AGT24864 N559_3204 23S rRNA pseudouridylate synthase C [Ensembl]. S4 domain... 0.03 OrthoFinder
EDJ90580 CGSHi22421_01207 SfhB [Ensembl]. S4 domain, RNA pseudouridylate synthase... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0004150 dihydroneopterin aldolase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
BP GO:0006304 DNA modification IEP Enrichment
BP GO:0006305 DNA alkylation IEP Enrichment
BP GO:0006306 DNA methylation IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0008653 lipopolysaccharide metabolic process IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
MF GO:0009007 site-specific DNA-methyltransferase (adenine-specific) activity IEP Enrichment
MF GO:0009008 DNA-methyltransferase activity IEP Enrichment
BP GO:0009103 lipopolysaccharide biosynthetic process IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
BP GO:0032775 DNA methylation on adenine IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044728 DNA methylation or demethylation IEP Enrichment
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
InterPro domains Description Start Stop
IPR002942 S4_RNA-bd 18 65
IPR006145 PsdUridine_synth_RsuA/RluA 92 242
UniProtKB P33643