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AAC76211 (rlmE, b3179)


Aliases : rlmE, b3179

Description : 23S rRNA U2552 2'-O-ribose methyltransferase, SAM-dependent [Ensembl]. FtsJ-like methyltransferase [Interproscan].


Gene families : OG_02_0001669 (OrthoFinder) Phylogenetic Tree(s): OG0001669_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAC76211
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAL22167 STM3297, ftsJ 23S rRNA methyltransferase [Ensembl]. FtsJ-like... 0.18 OrthoFinder
AGT22376 N559_0578 23S rRNA methyltransferase J [Ensembl]. Ribosomal RNA... 0.04 OrthoFinder
CRO20795 rlmE Ribosomal RNA large subunit methyltransferase E... 0.04 OrthoFinder
EDJ91116 CGSHi22421_10257 ribosomal RNA large subunit methyltransferase J... 0.1 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
BP GO:0032259 methylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003714 transcription corepressor activity IEP Enrichment
MF GO:0003941 L-serine ammonia-lyase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016841 ammonia-lyase activity IEP Enrichment
MF GO:0016989 sigma factor antagonist activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
BP GO:0032506 cytokinetic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090529 cell septum assembly IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR002877 rRNA_MeTrfase_FtsJ_dom 31 206
UniProtKB P0C0R7