AAC76671 (ligB, b3647)

Aliases : ligB, b3647

Description : DNA ligase, NAD(+)-dependent [Ensembl]. NAD-dependent DNA ligase OB-fold domain, NAD-dependent DNA ligase adenylation domain [Interproscan].

Gene families : OG_02_0003660 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAC76671
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method	Actions
AAL22598	STM3739, yicF	putative DNA ligase [Ensembl]. NAD-dependent DNA ligase...	0.07	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003909	DNA ligase activity	None	Extended
MF	GO:0003911	DNA ligase (NAD+) activity	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006281	DNA repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	Enrichment
MF	GO:0005315	inorganic phosphate transmembrane transporter activity	IEP	Enrichment
CC	GO:0005575	cellular_component	IEP	Enrichment
BP	GO:0005975	carbohydrate metabolic process	IEP	Enrichment
BP	GO:0005996	monosaccharide metabolic process	IEP	Enrichment
BP	GO:0006810	transport	IEP	Enrichment
BP	GO:0008643	carbohydrate transport	IEP	Enrichment
BP	GO:0008645	hexose transmembrane transport	IEP	Enrichment
MF	GO:0008740	L-rhamnose isomerase activity	IEP	Enrichment
BP	GO:0009297	pilus assembly	IEP	Enrichment
MF	GO:0015144	carbohydrate transmembrane transporter activity	IEP	Enrichment
MF	GO:0015145	monosaccharide transmembrane transporter activity	IEP	Enrichment
MF	GO:0015149	hexose transmembrane transporter activity	IEP	Enrichment
MF	GO:0015153	rhamnose transmembrane transporter activity	IEP	Enrichment
MF	GO:0015288	porin activity	IEP	Enrichment
MF	GO:0015473	fimbrial usher porin activity	IEP	Enrichment
BP	GO:0015749	monosaccharide transmembrane transport	IEP	Enrichment
CC	GO:0016020	membrane	IEP	Enrichment
MF	GO:0019203	carbohydrate phosphatase activity	IEP	Enrichment
BP	GO:0019299	rhamnose metabolic process	IEP	Enrichment
BP	GO:0019318	hexose metabolic process	IEP	Enrichment
MF	GO:0022804	active transmembrane transporter activity	IEP	Enrichment
MF	GO:0022829	wide pore channel activity	IEP	Enrichment
MF	GO:0022857	transmembrane transporter activity	IEP	Enrichment
BP	GO:0030030	cell projection organization	IEP	Enrichment
BP	GO:0030031	cell projection assembly	IEP	Enrichment
MF	GO:0042132	fructose 1,6-bisphosphate 1-phosphatase activity	IEP	Enrichment
BP	GO:0043711	pilus organization	IEP	Enrichment
MF	GO:0050308	sugar-phosphatase activity	IEP	Enrichment
MF	GO:0051119	sugar transmembrane transporter activity	IEP	Enrichment
BP	GO:0051179	localization	IEP	Enrichment
BP	GO:0051234	establishment of localization	IEP	Enrichment
BP	GO:0055085	transmembrane transport	IEP	Enrichment
CC	GO:0110165	cellular anatomical entity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004150	NAD_DNA_ligase_OB	312	385
IPR013839	DNAligase_adenylation	113	306

External Links

UniProtKB	P25772

AAC76671 (ligB, b3647)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation