AAT48175 (yrdD, b3283)

Aliases : yrdD, b3283

Description : ssDNA-binding protein, function unknown [Ensembl]. Topoisomerase DNA binding C4 zinc finger [Interproscan].

Gene families : OG_02_0002455 (OrthoFinder) Phylogenetic Tree(s): OG0002455_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAT48175
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAL22266 STM3403, yrdD putative DNA topoisomerase [Ensembl]. Topoisomerase DNA... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003916 DNA topoisomerase activity IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0006265 DNA topological change IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0008745 N-acetylmuramoyl-L-alanine amidase activity IEP Enrichment
MF GO:0030551 cyclic nucleotide binding IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0035438 cyclic-di-GMP binding IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
InterPro domains Description Start Stop
IPR013498 Topo_IA_Znf 13 49
IPR013498 Topo_IA_Znf 104 142
IPR013498 Topo_IA_Znf 62 98
IPR013498 Topo_IA_Znf 145 167
UniProtKB P45771